RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 H3BPC8 53 aa6.99□□□□□ -1.29
PKP4-213ENST00000486254 CDK2AP2O75956 126 aa6.99□□□□□ -1.29
PKP4-213ENST00000486254 LCE3BQ5TA77 95 aa6.99□□□□□ -1.29
PKP4-213ENST00000486254 hDV103S1A0JD37 113 aa6.98□□□□□ -1.29
PKP4-213ENST00000486254 ZCCHC13Q8WW36 166 aaKnown RBP6.98□□□□□ -1.29
PKP4-213ENST00000486254 C8orf17Q9NRJ1 99 aa6.98□□□□□ -1.29
PKP4-213ENST00000486254 SNURFQ9Y675 71 aa6.98□□□□□ -1.29
PKP4-213ENST00000486254 LRP1BQ9NZR2 4599 aa6.97□□□□□ -1.29
PKP4-213ENST00000486254 TP53AIP1Q9HCN2 124 aa6.97□□□□□ -1.29
PKP4-213ENST00000486254 VPS13BQ7Z7G8 4022 aa6.96□□□□□ -1.29
PKP4-213ENST00000486254 FAM236DA0A1B0GTK5 79 aa6.96□□□□□ -1.29
PKP4-213ENST00000486254 FAM236CP0DP71 79 aa6.96□□□□□ -1.29
PKP4-213ENST00000486254 LIMD2Q9BT23 127 aa6.96□□□□□ -1.29
PKP4-213ENST00000486254 PKHD1P08F94 4074 aa6.96□□□□□ -1.3
PKP4-213ENST00000486254 RPS29P62273 56 aaKnown RBP6.95□□□□□ -1.3
PKP4-213ENST00000486254 MP68P56378 58 aa6.95□□□□□ -1.3
PKP4-213ENST00000486254 KRTAP4-8A0A0G2JLE6 195 aa6.94□□□□□ -1.3
PKP4-213ENST00000486254 C8orf87E5RJ46 101 aa6.94□□□□□ -1.3
PKP4-213ENST00000486254 PLA2G1BP04054 148 aaKnown RBP6.93□□□□□ -1.3
PKP4-213ENST00000486254 SPINK1P00995 79 aa6.92□□□□□ -1.3
PKP4-213ENST00000486254 RYR2Q92736 4967 aa6.92□□□□□ -1.3
PKP4-213ENST00000486254 IGHV6-1A0A0B4J1U7 121 aa6.91□□□□□ -1.3
PKP4-213ENST00000486254 KRTAP10-4P60372 401 aaPredicted RBP6.91□□□□□ -1.3
PKP4-213ENST00000486254 MRPL34Q9BQ48 92 aaKnown RBP6.91□□□□□ -1.3
PKP4-213ENST00000486254 DYNC1H1Q14204 4646 aaKnown RBP6.9□□□□□ -1.3
PKP4-213ENST00000486254 TRAV22A0A0B4J277 110 aa6.9□□□□□ -1.31
PKP4-213ENST00000486254 SPAG11AQ6PDA7 123 aa6.9□□□□□ -1.31
PKP4-213ENST00000486254 TYMSOSQ8TAI1 123 aa6.9□□□□□ -1.31
PKP4-213ENST00000486254 C1orf195Q5TG92 126 aa6.89□□□□□ -1.31
PKP4-213ENST00000486254 KRTAP9-9Q9BYP9 154 aa6.89□□□□□ -1.31
PKP4-213ENST00000486254 KRTAP9-4Q9BYQ2 154 aa6.89□□□□□ -1.31
PKP4-213ENST00000486254 H0Y9P7 68 aa6.88□□□□□ -1.31
PKP4-213ENST00000486254 LCE2CQ5TA81 110 aa6.88□□□□□ -1.31
PKP4-213ENST00000486254 SERP1Q9Y6X1 66 aa6.88□□□□□ -1.31
PKP4-213ENST00000486254 C4orf48Q5BLP8 95 aa6.87□□□□□ -1.31
PKP4-213ENST00000486254 LORP23490 312 aaPredicted RBP6.85□□□□□ -1.31
PKP4-213ENST00000486254 LINC00304Q8N9R0 145 aa6.84□□□□□ -1.31
PKP4-213ENST00000486254 SPANXA2-OT1Q8N9U9 137 aa6.84□□□□□ -1.31
PKP4-213ENST00000486254 LINC00208Q96KT6 92 aa6.84□□□□□ -1.31
PKP4-213ENST00000486254 APOBP04114 4563 aaKnown RBP6.83□□□□□ -1.32
PKP4-213ENST00000486254 NOTCH2NLQ7Z3S9 236 aa6.82□□□□□ -1.32
PKP4-213ENST00000486254 SMR3BP02814 79 aaPredicted RBP6.82□□□□□ -1.32
PKP4-213ENST00000486254 C1orf64Q8NEQ6 169 aa6.82□□□□□ -1.32
PKP4-213ENST00000486254 CYP4F30PQ9H0H9 118 aa6.82□□□□□ -1.32
PKP4-213ENST00000486254 LINC00313P59037 77 aa6.81□□□□□ -1.32
PKP4-213ENST00000486254 PRR26Q8N8Z3 221 aa6.81□□□□□ -1.32
PKP4-213ENST00000486254 Q8N9P0 234 aaPredicted RBP6.81□□□□□ -1.32
PKP4-213ENST00000486254 KMT2CQ8NEZ4 4911 aaKnown RBP6.8□□□□□ -1.32
PKP4-213ENST00000486254 NDUFS5O43920 106 aa6.78□□□□□ -1.32
PKP4-213ENST00000486254 KRTAP13-3Q3SY46 172 aa6.78□□□□□ -1.32
PKP4-213ENST00000486254 LOC101927531A0A1B0GV80 90 aa6.77□□□□□ -1.33
PKP4-213ENST00000486254 KRTAP16-1A8MUX0 517 aa6.77□□□□□ -1.33
PKP4-213ENST00000486254 FAM229AH3BQW9 127 aa6.77□□□□□ -1.33
PKP4-213ENST00000486254 OXTP01178 125 aa6.77□□□□□ -1.33
PKP4-213ENST00000486254 KRTAP4-12Q9BQ66 201 aa6.77□□□□□ -1.33
PKP4-213ENST00000486254 KRTAP4-7Q9BYR0 210 aa6.75□□□□□ -1.33
PKP4-213ENST00000486254 PKHD1L1Q86WI1 4243 aa6.74□□□□□ -1.33
PKP4-213ENST00000486254 SMIM26A0A096LP01 95 aa6.72□□□□□ -1.33
PKP4-213ENST00000486254 IGLV7-46A0A075B6I9 117 aa6.71□□□□□ -1.34
PKP4-213ENST00000486254 Q5W150 140 aa6.69□□□□□ -1.34
PKP4-213ENST00000486254 FAT1Q14517 4588 aa6.69□□□□□ -1.34
PKP4-213ENST00000486254 Q5VSD8 79 aa6.69□□□□□ -1.34
PKP4-213ENST00000486254 FLG2Q5D862 2391 aaPredicted RBP6.65□□□□□ -1.35
PKP4-213ENST00000486254 KRTAP10-8P60410 259 aa6.65□□□□□ -1.35
PKP4-213ENST00000486254 IGKV2-30P06310 120 aa6.63□□□□□ -1.35
PKP4-213ENST00000486254 HSPG2P98160 4391 aa6.63□□□□□ -1.35
PKP4-213ENST00000486254 FP248Q71RG6 208 aaPredicted RBP6.62□□□□□ -1.35
PKP4-213ENST00000486254 PCOTHQ58A44 107 aa6.61□□□□□ -1.35
PKP4-213ENST00000486254 C20orf166-AS1Q96NR2 134 aa6.61□□□□□ -1.35
PKP4-213ENST00000486254 A8MUU9 505 aa6.6□□□□□ -1.35
PKP4-213ENST00000486254 PRR4Q16378 134 aa6.6□□□□□ -1.35
PKP4-213ENST00000486254 RYR1P21817 5038 aa6.59□□□□□ -1.35
PKP4-213ENST00000486254 Q8N1X5 172 aa6.59□□□□□ -1.35
PKP4-213ENST00000486254 RYR3Q15413 4870 aa6.58□□□□□ -1.36
PKP4-213ENST00000486254 Q1T7F1 81 aa6.57□□□□□ -1.36
PKP4-213ENST00000486254 COA5Q86WW8 74 aa6.55□□□□□ -1.36
PKP4-213ENST00000486254 KRTAP17-1Q9BYP8 105 aa6.55□□□□□ -1.36
PKP4-213ENST00000486254 V9GYY9 64 aa6.55□□□□□ -1.36
PKP4-213ENST00000486254 LCE1DQ5T752 114 aa6.54□□□□□ -1.36
PKP4-213ENST00000486254 DMAC1Q96GE9 116 aa6.54□□□□□ -1.36
PKP4-213ENST00000486254 HRES1P13985 223 aa6.53□□□□□ -1.36
PKP4-213ENST00000486254 TNXBP22105 4242 aa6.53□□□□□ -1.36
PKP4-213ENST00000486254 C7orf65Q6ZTY9 151 aa6.52□□□□□ -1.36
PKP4-213ENST00000486254 Q75L30 129 aa6.52□□□□□ -1.36
PKP4-213ENST00000486254 C4orf26Q17RF5 130 aa6.51□□□□□ -1.37
PKP4-213ENST00000486254 ACYP2P14621 99 aa6.5□□□□□ -1.37
PKP4-213ENST00000486254 MT1HL1P0DM35 61 aa6.49□□□□□ -1.37
PKP4-213ENST00000486254 RETNLBQ9BQ08 111 aa6.48□□□□□ -1.37
PKP4-213ENST00000486254 IGKV2D-30A0A075B6S6 120 aa6.48□□□□□ -1.37
PKP4-213ENST00000486254 C9orf92A6NGG3 77 aa6.48□□□□□ -1.37
PKP4-213ENST00000486254 KRTAP4-2Q9BYR5 136 aa6.47□□□□□ -1.37
PKP4-213ENST00000486254 DMBT1Q9UGM3 2413 aaPredicted RBP6.46□□□□□ -1.38
PKP4-213ENST00000486254 A8MUN3 132 aa6.46□□□□□ -1.38
PKP4-213ENST00000486254 MPLKIPQ8TAP9 179 aa6.46□□□□□ -1.38
PKP4-213ENST00000486254 KIAA1109Q2LD37 5005 aa6.44□□□□□ -1.38
PKP4-213ENST00000486254 FAT3Q8TDW7 4589 aa6.44□□□□□ -1.38
PKP4-213ENST00000486254 LRP1Q07954 4544 aaKnown RBP6.43□□□□□ -1.38
PKP4-213ENST00000486254 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
PKP4-213ENST00000486254 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
PKP4-213ENST00000486254 LINC01558Q9Y6Z2 57 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms