RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 GCHFRP30047 84 aa0.71□□□□□ -2.3
VPS8-223ENST00000485024 RPS29P62273 56 aaKnown RBP0.71□□□□□ -2.3
VPS8-223ENST00000485024 Q6ZRX8 168 aa0.71□□□□□ -2.3
VPS8-223ENST00000485024 LSM10Q969L4 123 aaKnown RBP0.71□□□□□ -2.3
VPS8-223ENST00000485024 R4GMQ9 66 aa0.71□□□□□ -2.3
VPS8-223ENST00000485024 CYP4F30PQ9H0H9 118 aa0.7□□□□□ -2.3
VPS8-223ENST00000485024 A0A087WWC5 75 aa0.69□□□□□ -2.3
VPS8-223ENST00000485024 H0YAA0 97 aa0.69□□□□□ -2.3
VPS8-223ENST00000485024 SSSCA1O60232 199 aa0.69□□□□□ -2.3
VPS8-223ENST00000485024 MRPS10P82664 201 aaKnown RBP0.69□□□□□ -2.3
VPS8-223ENST00000485024 CATR1Q13166 79 aa0.69□□□□□ -2.3
VPS8-223ENST00000485024 SPRR2GQ9BYE4 73 aa0.69□□□□□ -2.3
VPS8-223ENST00000485024 LENEPQ9Y5L5 61 aa0.69□□□□□ -2.3
VPS8-223ENST00000485024 TRAV1-2A0A0B4J238 106 aa0.68□□□□□ -2.3
VPS8-223ENST00000485024 A8MTW9 85 aa0.68□□□□□ -2.3
VPS8-223ENST00000485024 PPP1R17O96001 155 aa0.68□□□□□ -2.3
VPS8-223ENST00000485024 CYB5AP00167 134 aa0.68□□□□□ -2.3
VPS8-223ENST00000485024 MRPL54Q6P161 138 aaKnown RBP0.68□□□□□ -2.3
VPS8-223ENST00000485024 ENHOQ6UWT2 76 aa0.68□□□□□ -2.3
VPS8-223ENST00000485024 C2orf88Q9BSF0 95 aa0.68□□□□□ -2.3
VPS8-223ENST00000485024 SCN3BQ9NY72 215 aa0.68□□□□□ -2.3
VPS8-223ENST00000485024 LOC100130705A0A1B0GUX0 176 aa0.67□□□□□ -2.3
VPS8-223ENST00000485024 A0A1B0GV90 55 aa0.67□□□□□ -2.3
VPS8-223ENST00000485024 SPINK4O60575 86 aa0.67□□□□□ -2.3
VPS8-223ENST00000485024 NMBP08949 121 aa0.67□□□□□ -2.3
VPS8-223ENST00000485024 SAA2P0DJI9 122 aaPredicted RBP0.67□□□□□ -2.3
VPS8-223ENST00000485024 GNG4P50150 75 aa0.67□□□□□ -2.3
VPS8-223ENST00000485024 SMIM4Q8WVI0 70 aa0.67□□□□□ -2.3
VPS8-223ENST00000485024 SNAPC5O75971 98 aa0.66□□□□□ -2.3
VPS8-223ENST00000485024 DEFB1P60022 68 aa0.66□□□□□ -2.3
VPS8-223ENST00000485024 C5orf38Q86SI9 138 aa0.66□□□□□ -2.3
VPS8-223ENST00000485024 IER3IP1Q9Y5U9 82 aa0.66□□□□□ -2.3
VPS8-223ENST00000485024 F6UZH7 168 aa0.65□□□□□ -2.31
VPS8-223ENST00000485024 CORTO00230 105 aa0.65□□□□□ -2.31
VPS8-223ENST00000485024 HMGN4O00479 90 aa0.65□□□□□ -2.31
VPS8-223ENST00000485024 ATP5EP56381 51 aaPredicted RBP0.65□□□□□ -2.31
VPS8-223ENST00000485024 UBE2D2P62837 147 aa0.65□□□□□ -2.31
VPS8-223ENST00000485024 WHAMMP3Q1A5X7 153 aa0.65□□□□□ -2.31
VPS8-223ENST00000485024 GNG8Q9UK08 70 aa0.65□□□□□ -2.31
VPS8-223ENST00000485024 MT1XP80297 61 aa0.64□□□□□ -2.31
VPS8-223ENST00000485024 SPAG11BQ08648 103 aa0.64□□□□□ -2.31
VPS8-223ENST00000485024 C9orf153Q5TBE3 101 aa0.64□□□□□ -2.31
VPS8-223ENST00000485024 MT1MQ8N339 61 aa0.64□□□□□ -2.31
VPS8-223ENST00000485024 MGST2Q99735 147 aa0.64□□□□□ -2.31
VPS8-223ENST00000485024 UBE2L5PA0A1B0GUS4 154 aa0.63□□□□□ -2.31
VPS8-223ENST00000485024 FAM24AA6NFZ4 105 aa0.63□□□□□ -2.31
VPS8-223ENST00000485024 TMEM262E9PQX1 116 aa0.63□□□□□ -2.31
VPS8-223ENST00000485024 SFTA3P0C7M3 94 aa0.63□□□□□ -2.31
VPS8-223ENST00000485024 PPP3R1P63098 170 aa0.63□□□□□ -2.31
VPS8-223ENST00000485024 UBE2L3P68036 154 aaKnown RBP0.63□□□□□ -2.31
VPS8-223ENST00000485024 COX17Q14061 63 aa0.63□□□□□ -2.31
VPS8-223ENST00000485024 RPL39P5Q59GN2 51 aa0.63□□□□□ -2.31
VPS8-223ENST00000485024 CFAP126Q5VTH2 177 aa0.63□□□□□ -2.31
VPS8-223ENST00000485024 V9GYH0 126 aa0.63□□□□□ -2.31
VPS8-223ENST00000485024 I3L2K1 104 aa0.62□□□□□ -2.31
VPS8-223ENST00000485024 MT1EP04732 61 aa0.62□□□□□ -2.31
VPS8-223ENST00000485024 SVBPQ8N300 66 aa0.62□□□□□ -2.31
VPS8-223ENST00000485024 TRBV7-3A0A075B6L6 115 aa0.61□□□□□ -2.31
VPS8-223ENST00000485024 CTXND1A0A1B0GTU2 59 aa0.61□□□□□ -2.31
VPS8-223ENST00000485024 APOC3P02656 99 aa0.6□□□□□ -2.31
VPS8-223ENST00000485024 SPINK8P0C7L1 97 aa0.6□□□□□ -2.31
VPS8-223ENST00000485024 S100A3P33764 101 aa0.6□□□□□ -2.31
VPS8-223ENST00000485024 PKIAP61925 76 aa0.6□□□□□ -2.31
VPS8-223ENST00000485024 AMELXQ99217 191 aa0.6□□□□□ -2.31
VPS8-223ENST00000485024 NPVFQ9HCQ7 196 aa0.6□□□□□ -2.31
VPS8-223ENST00000485024 LINC00587B1AMM8 73 aa0.59□□□□□ -2.31
VPS8-223ENST00000485024 K7EIM0 57 aa0.59□□□□□ -2.31
VPS8-223ENST00000485024 BCE1O60756 84 aa0.59□□□□□ -2.31
VPS8-223ENST00000485024 S100A1P23297 94 aa0.59□□□□□ -2.31
VPS8-223ENST00000485024 RBP2P50120 134 aa0.59□□□□□ -2.31
VPS8-223ENST00000485024 NDUFA4L2Q9NRX3 87 aa0.59□□□□□ -2.31
VPS8-223ENST00000485024 UQCR11O14957 56 aa0.58□□□□□ -2.32
VPS8-223ENST00000485024 RPS27P42677 84 aaKnown RBP0.58□□□□□ -2.32
VPS8-223ENST00000485024 KRTAP19-7Q3SYF9 63 aa0.58□□□□□ -2.32
VPS8-223ENST00000485024 BAGE2Q86Y30 109 aa0.58□□□□□ -2.32
VPS8-223ENST00000485024 UQCR10Q9UDW1 63 aa0.58□□□□□ -2.32
VPS8-223ENST00000485024 CPSF4LA6NMK7 179 aaKnown RBP0.57□□□□□ -2.32
VPS8-223ENST00000485024 ZNF815PA8K554 130 aa0.57□□□□□ -2.32
VPS8-223ENST00000485024 F8VRH5 84 aa0.57□□□□□ -2.32
VPS8-223ENST00000485024 IFITM1P13164 125 aa0.57□□□□□ -2.32
VPS8-223ENST00000485024 GTF2H5Q6ZYL4 71 aa0.57□□□□□ -2.32
VPS8-223ENST00000485024 CNFNQ9BYD5 112 aa0.57□□□□□ -2.32
VPS8-223ENST00000485024 IGLC7A0M8Q6 106 aa0.56□□□□□ -2.32
VPS8-223ENST00000485024 H3BQ15 152 aa0.56□□□□□ -2.32
VPS8-223ENST00000485024 KRTAP6-2Q3LI66 62 aa0.56□□□□□ -2.32
VPS8-223ENST00000485024 TMEM170BQ5T4T1 132 aa0.56□□□□□ -2.32
VPS8-223ENST00000485024 SSBP3-AS1Q7Z2R9 100 aa0.56□□□□□ -2.32
VPS8-223ENST00000485024 FAM213BQ8TBF2 198 aa0.56□□□□□ -2.32
VPS8-223ENST00000485024 ABRACLQ9P1F3 81 aa0.56□□□□□ -2.32
VPS8-223ENST00000485024 H3BQF6 201 aa0.55□□□□□ -2.32
VPS8-223ENST00000485024 S100PP25815 95 aa0.55□□□□□ -2.32
VPS8-223ENST00000485024 SNRPGP62308 76 aaKnown RBP0.55□□□□□ -2.32
VPS8-223ENST00000485024 CLPSL2Q6UWE3 100 aa0.55□□□□□ -2.32
VPS8-223ENST00000485024 V9GYS6 101 aa0.55□□□□□ -2.32
VPS8-223ENST00000485024 CRYM-AS1A6NIL9 109 aa0.54□□□□□ -2.32
VPS8-223ENST00000485024 RPL38P63173 70 aaKnown RBP0.54□□□□□ -2.32
VPS8-223ENST00000485024 Q5BKY6 102 aa0.54□□□□□ -2.32
VPS8-223ENST00000485024 CGREF1Q99674 301 aa0.54□□□□□ -2.32
VPS8-223ENST00000485024 TCEAL7Q9BRU2 100 aa0.54□□□□□ -2.32
VPS8-223ENST00000485024 SPCS1Q9Y6A9 102 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms