RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 ATP11AUNQ6ZP68 121 aa6.35□□□□□ -1.39
SNRNP200-206ENST00000484372 C14orf132Q9NPU4 83 aa6.35□□□□□ -1.39
SNRNP200-206ENST00000484372 A0A087WSZ3 146 aa6.34□□□□□ -1.39
SNRNP200-206ENST00000484372 SS18L2Q9UHA2 77 aa6.34□□□□□ -1.39
SNRNP200-206ENST00000484372 A0A1B0GW54 56 aa6.33□□□□□ -1.4
SNRNP200-206ENST00000484372 C21orf62-AS1Q17RA5 79 aa6.33□□□□□ -1.4
SNRNP200-206ENST00000484372 A0A1B0GV90 55 aa6.32□□□□□ -1.4
SNRNP200-206ENST00000484372 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
SNRNP200-206ENST00000484372 Q75L30 129 aa6.31□□□□□ -1.4
SNRNP200-206ENST00000484372 VPS25Q9BRG1 176 aa6.31□□□□□ -1.4
SNRNP200-206ENST00000484372 Q96NJ1 140 aa6.29□□□□□ -1.4
SNRNP200-206ENST00000484372 ETDBQ3ZM63 59 aa6.28□□□□□ -1.4
SNRNP200-206ENST00000484372 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
SNRNP200-206ENST00000484372 KRTAP10-6P60371 365 aaPredicted RBP6.27□□□□□ -1.41
SNRNP200-206ENST00000484372 LINC00472Q9H8W2 130 aa6.27□□□□□ -1.41
SNRNP200-206ENST00000484372 LCE2BO14633 110 aa6.26□□□□□ -1.41
SNRNP200-206ENST00000484372 LORP23490 312 aaPredicted RBP6.26□□□□□ -1.41
SNRNP200-206ENST00000484372 FLGP20930 4061 aaPredicted RBP6.23□□□□□ -1.41
SNRNP200-206ENST00000484372 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.42
SNRNP200-206ENST00000484372 IGKV4-1P06312 121 aa6.2□□□□□ -1.42
SNRNP200-206ENST00000484372 NREPQ16612 68 aa6.2□□□□□ -1.42
SNRNP200-206ENST00000484372 DEFB116Q30KQ4 102 aa6.2□□□□□ -1.42
SNRNP200-206ENST00000484372 A8MUU9 505 aa6.19□□□□□ -1.42
SNRNP200-206ENST00000484372 J3KT08 172 aa6.19□□□□□ -1.42
SNRNP200-206ENST00000484372 SIGMAR1Q99720 223 aa6.19□□□□□ -1.42
SNRNP200-206ENST00000484372 LINC00846Q9NV44 126 aa6.17□□□□□ -1.42
SNRNP200-206ENST00000484372 DSCR10P59022 87 aa6.16□□□□□ -1.42
SNRNP200-206ENST00000484372 LINC00313P59037 77 aa6.16□□□□□ -1.42
SNRNP200-206ENST00000484372 Q6ZVQ6 151 aa6.15□□□□□ -1.42
SNRNP200-206ENST00000484372 UBL5Q9BZL1 73 aa6.14□□□□□ -1.43
SNRNP200-206ENST00000484372 FAM240AA0A1B0GVK7 77 aa6.13□□□□□ -1.43
SNRNP200-206ENST00000484372 A8MWP4 228 aa6.13□□□□□ -1.43
SNRNP200-206ENST00000484372 ACYP1P07311 99 aa6.13□□□□□ -1.43
SNRNP200-206ENST00000484372 A0A1B0GVX0 72 aa6.12□□□□□ -1.43
SNRNP200-206ENST00000484372 NDUFB1O75438 58 aa6.12□□□□□ -1.43
SNRNP200-206ENST00000484372 IGHV6-1A0A0B4J1U7 121 aa6.11□□□□□ -1.43
SNRNP200-206ENST00000484372 IGKV3D-7A0A0C4DH55 119 aa6.11□□□□□ -1.43
SNRNP200-206ENST00000484372 BPY2O14599 106 aa6.11□□□□□ -1.43
SNRNP200-206ENST00000484372 NOTCH2NLQ7Z3S9 236 aa6.11□□□□□ -1.43
SNRNP200-206ENST00000484372 FAM236DA0A1B0GTK5 79 aa6.1□□□□□ -1.43
SNRNP200-206ENST00000484372 C8orf87E5RJ46 101 aa6.1□□□□□ -1.43
SNRNP200-206ENST00000484372 FAM236CP0DP71 79 aa6.1□□□□□ -1.43
SNRNP200-206ENST00000484372 PRR15Q8IV56 129 aa6.1□□□□□ -1.43
SNRNP200-206ENST00000484372 KRTAP16-1A8MUX0 517 aa6.08□□□□□ -1.44
SNRNP200-206ENST00000484372 RBM12B-AS1Q9P1G2 102 aa6.08□□□□□ -1.44
SNRNP200-206ENST00000484372 K7EQZ3 153 aa6.06□□□□□ -1.44
SNRNP200-206ENST00000484372 J3QR89 54 aa6.05□□□□□ -1.44
SNRNP200-206ENST00000484372 CXCL6P80162 114 aa6.05□□□□□ -1.44
SNRNP200-206ENST00000484372 C8orf17Q9NRJ1 99 aa6.05□□□□□ -1.44
SNRNP200-206ENST00000484372 MMP24-AS1A0A0U1RRL7 71 aa6.02□□□□□ -1.45
SNRNP200-206ENST00000484372 Q8N9L7 120 aa6.02□□□□□ -1.45
SNRNP200-206ENST00000484372 Q8N9P0 234 aaPredicted RBP6.01□□□□□ -1.45
SNRNP200-206ENST00000484372 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
SNRNP200-206ENST00000484372 hDV103S1A0JD37 113 aa5.99□□□□□ -1.45
SNRNP200-206ENST00000484372 ATP5EP2Q5VTU8 51 aa5.99□□□□□ -1.45
SNRNP200-206ENST00000484372 LINC00643Q86TS7 51 aa5.99□□□□□ -1.45
SNRNP200-206ENST00000484372 TMEM254Q8TBM7 123 aa5.99□□□□□ -1.45
SNRNP200-206ENST00000484372 HRES1P13985 223 aa5.98□□□□□ -1.45
SNRNP200-206ENST00000484372 MRPL34Q9BQ48 92 aaKnown RBP5.98□□□□□ -1.45
SNRNP200-206ENST00000484372 MPLKIPQ8TAP9 179 aa5.97□□□□□ -1.45
SNRNP200-206ENST00000484372 K7ERU9 68 aa5.96□□□□□ -1.46
SNRNP200-206ENST00000484372 ZCCHC13Q8WW36 166 aaKnown RBP5.96□□□□□ -1.46
SNRNP200-206ENST00000484372 HCG22E2RYF7 251 aa5.95□□□□□ -1.46
SNRNP200-206ENST00000484372 CASC2Q6XLA1 102 aa5.95□□□□□ -1.46
SNRNP200-206ENST00000484372 WFDC13Q8IUB5 93 aa5.94□□□□□ -1.46
SNRNP200-206ENST00000484372 USH2AO75445 5202 aa5.92□□□□□ -1.46
SNRNP200-206ENST00000484372 SPINK7P58062 85 aa5.92□□□□□ -1.46
SNRNP200-206ENST00000484372 MT2AP02795 61 aa5.91□□□□□ -1.46
SNRNP200-206ENST00000484372 KRTAP10-10P60014 251 aa5.9□□□□□ -1.46
SNRNP200-206ENST00000484372 HIST1H4AP62805 103 aaKnown RBP5.89□□□□□ -1.47
SNRNP200-206ENST00000484372 SSPOA2VEC9 5147 aa5.88□□□□□ -1.47
SNRNP200-206ENST00000484372 NDUFS5O43920 106 aa5.88□□□□□ -1.47
SNRNP200-206ENST00000484372 MT1FP04733 61 aa5.86□□□□□ -1.47
SNRNP200-206ENST00000484372 A0A087WVE0 104 aa5.85□□□□□ -1.47
SNRNP200-206ENST00000484372 Q5W150 140 aa5.84□□□□□ -1.47
SNRNP200-206ENST00000484372 TP53AIP1Q9HCN2 124 aa5.84□□□□□ -1.47
SNRNP200-206ENST00000484372 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.83□□□□□ -1.48
SNRNP200-206ENST00000484372 IMUPQ9GZP8 106 aa5.83□□□□□ -1.48
SNRNP200-206ENST00000484372 MT-ATP8P03928 68 aa5.82□□□□□ -1.48
SNRNP200-206ENST00000484372 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
SNRNP200-206ENST00000484372 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
SNRNP200-206ENST00000484372 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
SNRNP200-206ENST00000484372 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
SNRNP200-206ENST00000484372 UQCRQO14949 82 aa5.75□□□□□ -1.49
SNRNP200-206ENST00000484372 OCR1Q9BZK8 76 aa5.74□□□□□ -1.49
SNRNP200-206ENST00000484372 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
SNRNP200-206ENST00000484372 IGKV2-30P06310 120 aa5.73□□□□□ -1.49
SNRNP200-206ENST00000484372 H1FX-AS1Q4G0G2 97 aa5.73□□□□□ -1.49
SNRNP200-206ENST00000484372 C7orf65Q6ZTY9 151 aa5.73□□□□□ -1.49
SNRNP200-206ENST00000484372 TRAV22A0A0B4J277 110 aa5.72□□□□□ -1.49
SNRNP200-206ENST00000484372 SCGB1A1P11684 91 aa5.7□□□□□ -1.5
SNRNP200-206ENST00000484372 FAM236AA0A1B0GUQ0 79 aa5.68□□□□□ -1.5
SNRNP200-206ENST00000484372 FAM236BA0A1B0GV22 79 aa5.68□□□□□ -1.5
SNRNP200-206ENST00000484372 ATOX1O00244 68 aa5.68□□□□□ -1.5
SNRNP200-206ENST00000484372 H0Y9P7 68 aa5.67□□□□□ -1.5
SNRNP200-206ENST00000484372 C5orf47Q569G3 176 aa5.67□□□□□ -1.5
SNRNP200-206ENST00000484372 CYP4F30PQ9H0H9 118 aa5.67□□□□□ -1.5
SNRNP200-206ENST00000484372 LOC101927531A0A1B0GV80 90 aa5.66□□□□□ -1.5
SNRNP200-206ENST00000484372 KRTAP19-6Q3LI70 58 aa5.65□□□□□ -1.5
SNRNP200-206ENST00000484372 SMIM20Q8N5G0 67 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms