RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 IGKV4-1P06312 121 aa14.19□□□□□ -0.14
GTF3C4-202ENST00000483873 NREPQ16612 68 aa14.14□□□□□ -0.15
GTF3C4-202ENST00000483873 DSCR10P59022 87 aa14.1□□□□□ -0.15
GTF3C4-202ENST00000483873 LCE2AQ5TA79 106 aaPredicted RBP14.1□□□□□ -0.15
GTF3C4-202ENST00000483873 LINC00846Q9NV44 126 aa14.08□□□□□ -0.15
GTF3C4-202ENST00000483873 J3KT08 172 aa14.07□□□□□ -0.16
GTF3C4-202ENST00000483873 Q75L30 129 aa14.07□□□□□ -0.16
GTF3C4-202ENST00000483873 Q6ZVQ6 151 aa14.07□□□□□ -0.16
GTF3C4-202ENST00000483873 C20orf166-AS1Q96NR2 134 aa14.01□□□□□ -0.17
GTF3C4-202ENST00000483873 NOTCH2NLQ7Z3S9 236 aa14□□□□□ -0.17
GTF3C4-202ENST00000483873 A0A1B0GVX0 72 aa13.99□□□□□ -0.17
GTF3C4-202ENST00000483873 LINC00313P59037 77 aa13.99□□□□□ -0.17
GTF3C4-202ENST00000483873 IGHV6-1A0A0B4J1U7 121 aa13.98□□□□□ -0.17
GTF3C4-202ENST00000483873 A8MUU9 505 aa13.98□□□□□ -0.17
GTF3C4-202ENST00000483873 UBL5Q9BZL1 73 aa13.98□□□□□ -0.17
GTF3C4-202ENST00000483873 A8MWP4 228 aa13.97□□□□□ -0.17
GTF3C4-202ENST00000483873 KRTAP16-1A8MUX0 517 aa13.96□□□□□ -0.18
GTF3C4-202ENST00000483873 ATP11AUNQ6ZP68 121 aa13.96□□□□□ -0.18
GTF3C4-202ENST00000483873 BPY2O14599 106 aa13.95□□□□□ -0.18
GTF3C4-202ENST00000483873 IGKV3D-7A0A0C4DH55 119 aa13.94□□□□□ -0.18
GTF3C4-202ENST00000483873 NDUFB1O75438 58 aa13.93□□□□□ -0.18
GTF3C4-202ENST00000483873 KRTAP19-2Q3LHN2 52 aa13.92□□□□□ -0.18
GTF3C4-202ENST00000483873 KRTAP9-2Q9BYQ4 174 aa13.91□□□□□ -0.18
GTF3C4-202ENST00000483873 FAM240AA0A1B0GVK7 77 aa13.9□□□□□ -0.18
GTF3C4-202ENST00000483873 ACYP1P07311 99 aa13.9□□□□□ -0.18
GTF3C4-202ENST00000483873 C8orf87E5RJ46 101 aa13.9□□□□□ -0.19
GTF3C4-202ENST00000483873 LCE2CQ5TA81 110 aa13.89□□□□□ -0.19
GTF3C4-202ENST00000483873 K7EQZ3 153 aa13.88□□□□□ -0.19
GTF3C4-202ENST00000483873 PRR15Q8IV56 129 aa13.88□□□□□ -0.19
GTF3C4-202ENST00000483873 C8orf17Q9NRJ1 99 aa13.83□□□□□ -0.2
GTF3C4-202ENST00000483873 Q8N9L7 120 aa13.82□□□□□ -0.2
GTF3C4-202ENST00000483873 MMP24-AS1A0A0U1RRL7 71 aa13.77□□□□□ -0.21
GTF3C4-202ENST00000483873 J3QR89 54 aa13.75□□□□□ -0.21
GTF3C4-202ENST00000483873 CXCL6P80162 114 aa13.74□□□□□ -0.21
GTF3C4-202ENST00000483873 MT1HP80294 61 aa13.68□□□□□ -0.22
GTF3C4-202ENST00000483873 hDV103S1A0JD37 113 aa13.65□□□□□ -0.22
GTF3C4-202ENST00000483873 COX6B2Q6YFQ2 88 aa13.65□□□□□ -0.22
GTF3C4-202ENST00000483873 Q8N9P0 234 aaPredicted RBP13.65□□□□□ -0.22
GTF3C4-202ENST00000483873 TMEM254Q8TBM7 123 aa13.65□□□□□ -0.22
GTF3C4-202ENST00000483873 ATP5EP2Q5VTU8 51 aa13.64□□□□□ -0.23
GTF3C4-202ENST00000483873 MRPL34Q9BQ48 92 aaKnown RBP13.64□□□□□ -0.23
GTF3C4-202ENST00000483873 LINC00643Q86TS7 51 aa13.63□□□□□ -0.23
GTF3C4-202ENST00000483873 WFDC13Q8IUB5 93 aa13.63□□□□□ -0.23
GTF3C4-202ENST00000483873 CASC2Q6XLA1 102 aa13.6□□□□□ -0.23
GTF3C4-202ENST00000483873 FLGP20930 4061 aaPredicted RBP13.59□□□□□ -0.23
GTF3C4-202ENST00000483873 HCG22E2RYF7 251 aa13.57□□□□□ -0.24
GTF3C4-202ENST00000483873 K7ERU9 68 aa13.57□□□□□ -0.24
GTF3C4-202ENST00000483873 ZCCHC13Q8WW36 166 aaKnown RBP13.56□□□□□ -0.24
GTF3C4-202ENST00000483873 KRTAP9-6A0A140TA67 174 aa13.49□□□□□ -0.25
GTF3C4-202ENST00000483873 NDUFS5O43920 106 aa13.49□□□□□ -0.25
GTF3C4-202ENST00000483873 HIST1H4AP62805 103 aaKnown RBP13.49□□□□□ -0.25
GTF3C4-202ENST00000483873 HRES1P13985 223 aa13.47□□□□□ -0.25
GTF3C4-202ENST00000483873 A0A087WVE0 104 aa13.42□□□□□ -0.26
GTF3C4-202ENST00000483873 M0R2T5 61 aa13.42□□□□□ -0.26
GTF3C4-202ENST00000483873 MPLKIPQ8TAP9 179 aa13.4□□□□□ -0.26
GTF3C4-202ENST00000483873 LCE2DQ5TA82 110 aaPredicted RBP13.39□□□□□ -0.27
GTF3C4-202ENST00000483873 SPINK7P58062 85 aa13.39□□□□□ -0.27
GTF3C4-202ENST00000483873 KRTAP10-6P60371 365 aaPredicted RBP13.36□□□□□ -0.27
GTF3C4-202ENST00000483873 Q5W150 140 aa13.34□□□□□ -0.27
GTF3C4-202ENST00000483873 FAM236DA0A1B0GTK5 79 aa13.33□□□□□ -0.28
GTF3C4-202ENST00000483873 FAM236CP0DP71 79 aa13.33□□□□□ -0.28
GTF3C4-202ENST00000483873 LORP23490 312 aaPredicted RBP13.33□□□□□ -0.28
GTF3C4-202ENST00000483873 RBM12B-AS1Q9P1G2 102 aa13.33□□□□□ -0.28
GTF3C4-202ENST00000483873 MT-ATP8P03928 68 aa13.3□□□□□ -0.28
GTF3C4-202ENST00000483873 TP53AIP1Q9HCN2 124 aa13.25□□□□□ -0.29
GTF3C4-202ENST00000483873 FSIP2Q5CZC0 6907 aa13.22□□□□□ -0.29
GTF3C4-202ENST00000483873 IMUPQ9GZP8 106 aa13.2□□□□□ -0.3
GTF3C4-202ENST00000483873 IGKV2D-30A0A075B6S6 120 aa13.13□□□□□ -0.31
GTF3C4-202ENST00000483873 IGKV2-30P06310 120 aa13.13□□□□□ -0.31
GTF3C4-202ENST00000483873 CRCT1Q9UGL9 99 aa13.12□□□□□ -0.31
GTF3C4-202ENST00000483873 C7orf65Q6ZTY9 151 aa13.09□□□□□ -0.31
GTF3C4-202ENST00000483873 UQCRQO14949 82 aa13.07□□□□□ -0.32
GTF3C4-202ENST00000483873 TRAV22A0A0B4J277 110 aa13.06□□□□□ -0.32
GTF3C4-202ENST00000483873 OCR1Q9BZK8 76 aa13.06□□□□□ -0.32
GTF3C4-202ENST00000483873 SCGB1A1P11684 91 aa13.01□□□□□ -0.33
GTF3C4-202ENST00000483873 FAM236AA0A1B0GUQ0 79 aa13□□□□□ -0.33
GTF3C4-202ENST00000483873 FAM236BA0A1B0GV22 79 aa13□□□□□ -0.33
GTF3C4-202ENST00000483873 KRTAP9-8Q9BYQ0 159 aa13□□□□□ -0.33
GTF3C4-202ENST00000483873 H0Y9P7 68 aa12.98□□□□□ -0.33
GTF3C4-202ENST00000483873 ATOX1O00244 68 aa12.91□□□□□ -0.34
GTF3C4-202ENST00000483873 LOC101927531A0A1B0GV80 90 aa12.9□□□□□ -0.34
GTF3C4-202ENST00000483873 CYP4F30PQ9H0H9 118 aa12.89□□□□□ -0.35
GTF3C4-202ENST00000483873 C4orf26Q17RF5 130 aa12.87□□□□□ -0.35
GTF3C4-202ENST00000483873 MT2AP02795 61 aa12.86□□□□□ -0.35
GTF3C4-202ENST00000483873 H1FX-AS1Q4G0G2 97 aa12.86□□□□□ -0.35
GTF3C4-202ENST00000483873 C5orf47Q569G3 176 aa12.85□□□□□ -0.35
GTF3C4-202ENST00000483873 MP68P56378 58 aa12.84□□□□□ -0.35
GTF3C4-202ENST00000483873 C1orf64Q8NEQ6 169 aa12.84□□□□□ -0.35
GTF3C4-202ENST00000483873 LINC00208Q96KT6 92 aa12.84□□□□□ -0.35
GTF3C4-202ENST00000483873 SMIM20Q8N5G0 67 aa12.8□□□□□ -0.36
GTF3C4-202ENST00000483873 TRAV7A0A075B6U4 112 aa12.79□□□□□ -0.36
GTF3C4-202ENST00000483873 MT1FP04733 61 aa12.77□□□□□ -0.37
GTF3C4-202ENST00000483873 H3BPC8 53 aa12.73□□□□□ -0.37
GTF3C4-202ENST00000483873 KRTAP3-1Q9BYR8 98 aa12.7□□□□□ -0.38
GTF3C4-202ENST00000483873 KLKP1Q107X0 134 aa12.69□□□□□ -0.38
GTF3C4-202ENST00000483873 KRTAP10-10P60014 251 aa12.68□□□□□ -0.38
GTF3C4-202ENST00000483873 SERP2Q8N6R1 65 aa12.62□□□□□ -0.39
GTF3C4-202ENST00000483873 KRTAP9-3Q9BYQ3 159 aa12.57□□□□□ -0.4
GTF3C4-202ENST00000483873 S4R3F8 94 aa12.51□□□□□ -0.41
GTF3C4-202ENST00000483873 SNURFQ9Y675 71 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms