RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 FBN3Q75N90 2809 aa7.06□□□□□ -1.28
VTI1A-205ENST00000483122 Q5W150 140 aa7.06□□□□□ -1.28
VTI1A-205ENST00000483122 LINC01554Q52M75 96 aa7.05□□□□□ -1.28
VTI1A-205ENST00000483122 HUWE1Q7Z6Z7 4374 aaKnown RBP7.04□□□□□ -1.28
VTI1A-205ENST00000483122 KRTAP13-1Q8IUC0 172 aa7.04□□□□□ -1.28
VTI1A-205ENST00000483122 CDK2AP2O75956 126 aa7.03□□□□□ -1.28
VTI1A-205ENST00000483122 ACYP2P14621 99 aa7.02□□□□□ -1.29
VTI1A-205ENST00000483122 RTL8CO15255 209 aa7.01□□□□□ -1.29
VTI1A-205ENST00000483122 KRTAP13-3Q3SY46 172 aa7.01□□□□□ -1.29
VTI1A-205ENST00000483122 PANO1I0J062 215 aa7.01□□□□□ -1.29
VTI1A-205ENST00000483122 COL7A1Q02388 2944 aa7□□□□□ -1.29
VTI1A-205ENST00000483122 SPATA8Q6RVD6 105 aa6.99□□□□□ -1.29
VTI1A-205ENST00000483122 A0A1B0GU69 56 aa6.99□□□□□ -1.29
VTI1A-205ENST00000483122 H3BS24 57 aa6.99□□□□□ -1.29
VTI1A-205ENST00000483122 ANAPC11Q9NYG5 84 aa6.97□□□□□ -1.29
VTI1A-205ENST00000483122 DMAC1Q96GE9 116 aa6.96□□□□□ -1.3
VTI1A-205ENST00000483122 SPINK6Q6UWN8 80 aa6.96□□□□□ -1.3
VTI1A-205ENST00000483122 LINC00483Q53H64 154 aa6.95□□□□□ -1.3
VTI1A-205ENST00000483122 WWC2-AS2Q96NR7 200 aa6.95□□□□□ -1.3
VTI1A-205ENST00000483122 MIR22HGQ0VDD5 57 aa6.94□□□□□ -1.3
VTI1A-205ENST00000483122 C14orf177Q52M58 125 aa6.92□□□□□ -1.3
VTI1A-205ENST00000483122 CSAG1Q6PB30 78 aa6.92□□□□□ -1.3
VTI1A-205ENST00000483122 STAB2Q8WWQ8 2551 aa6.9□□□□□ -1.3
VTI1A-205ENST00000483122 RETNLBQ9BQ08 111 aa6.9□□□□□ -1.3
VTI1A-205ENST00000483122 UQCR11O14957 56 aa6.9□□□□□ -1.31
VTI1A-205ENST00000483122 DNAH7Q8WXX0 4024 aa6.9□□□□□ -1.31
VTI1A-205ENST00000483122 NUPR2A6NF83 97 aa6.89□□□□□ -1.31
VTI1A-205ENST00000483122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.89□□□□□ -1.31
VTI1A-205ENST00000483122 DNAH8Q96JB1 4490 aa6.88□□□□□ -1.31
VTI1A-205ENST00000483122 FRAS1Q86XX4 4008 aa6.88□□□□□ -1.31
VTI1A-205ENST00000483122 TGP01266 2768 aa6.88□□□□□ -1.31
VTI1A-205ENST00000483122 UBE2DNLQ8IWF7 75 aa6.87□□□□□ -1.31
VTI1A-205ENST00000483122 ZNF706Q9Y5V0 76 aaPredicted RBP6.86□□□□□ -1.31
VTI1A-205ENST00000483122 DYNC2H1Q8NCM8 4307 aaKnown RBP6.84□□□□□ -1.31
VTI1A-205ENST00000483122 SPACA4Q8TDM5 124 aa6.84□□□□□ -1.31
VTI1A-205ENST00000483122 PSORS1C2Q9UIG4 136 aa6.83□□□□□ -1.32
VTI1A-205ENST00000483122 IGKV2-30P06310 120 aa6.82□□□□□ -1.32
VTI1A-205ENST00000483122 ZNF861PO60384 105 aa6.81□□□□□ -1.32
VTI1A-205ENST00000483122 STARD9Q9P2P6 4700 aa6.81□□□□□ -1.32
VTI1A-205ENST00000483122 APLNQ9ULZ1 77 aa6.81□□□□□ -1.32
VTI1A-205ENST00000483122 CIRBP-AS1Q8TBR5 109 aa6.8□□□□□ -1.32
VTI1A-205ENST00000483122 FAM229AH3BQW9 127 aa6.8□□□□□ -1.32
VTI1A-205ENST00000483122 IGLV5-52A0A0A0MRZ9 124 aa6.79□□□□□ -1.32
VTI1A-205ENST00000483122 PLECQ15149 4684 aaKnown RBP6.77□□□□□ -1.33
VTI1A-205ENST00000483122 Q6ZRN7 208 aaPredicted RBP6.76□□□□□ -1.33
VTI1A-205ENST00000483122 IGLV7-43P04211 117 aa6.75□□□□□ -1.33
VTI1A-205ENST00000483122 NBDYA0A0U1RRE5 68 aa6.74□□□□□ -1.33
VTI1A-205ENST00000483122 HECTD4Q9Y4D8 3996 aa6.73□□□□□ -1.33
VTI1A-205ENST00000483122 IGKV2D-30A0A075B6S6 120 aa6.73□□□□□ -1.33
VTI1A-205ENST00000483122 C1orf134Q5TEV5 83 aa6.71□□□□□ -1.33
VTI1A-205ENST00000483122 DNAH17Q9UFH2 4485 aa6.7□□□□□ -1.34
VTI1A-205ENST00000483122 SPINK1P00995 79 aa6.7□□□□□ -1.34
VTI1A-205ENST00000483122 KRTAP16-1A8MUX0 517 aa6.69□□□□□ -1.34
VTI1A-205ENST00000483122 LY6G6CO95867 125 aa6.69□□□□□ -1.34
VTI1A-205ENST00000483122 VPS13DQ5THJ4 4388 aa6.68□□□□□ -1.34
VTI1A-205ENST00000483122 A0A087WTM6 91 aa6.66□□□□□ -1.34
VTI1A-205ENST00000483122 A8MUU9 505 aa6.65□□□□□ -1.34
VTI1A-205ENST00000483122 KRTAP25-1Q3LHN0 102 aa6.65□□□□□ -1.34
VTI1A-205ENST00000483122 SSBP3-AS1Q7Z2R9 100 aa6.65□□□□□ -1.35
VTI1A-205ENST00000483122 DNAH6Q9C0G6 4158 aa6.64□□□□□ -1.35
VTI1A-205ENST00000483122 H0YAA0 97 aa6.64□□□□□ -1.35
VTI1A-205ENST00000483122 Q6ZSA8 131 aa6.62□□□□□ -1.35
VTI1A-205ENST00000483122 Q8N1X5 172 aa6.62□□□□□ -1.35
VTI1A-205ENST00000483122 LINC00304Q8N9R0 145 aa6.62□□□□□ -1.35
VTI1A-205ENST00000483122 ROMO1P60602 79 aa6.61□□□□□ -1.35
VTI1A-205ENST00000483122 SACSQ9NZJ4 4579 aa6.61□□□□□ -1.35
VTI1A-205ENST00000483122 HYDINQ4G0P3 5121 aa6.59□□□□□ -1.36
VTI1A-205ENST00000483122 KMT2AQ03164 3969 aa6.58□□□□□ -1.36
VTI1A-205ENST00000483122 KRTAP13-2Q52LG2 175 aa6.58□□□□□ -1.36
VTI1A-205ENST00000483122 TYMSOSQ8TAI1 123 aa6.57□□□□□ -1.36
VTI1A-205ENST00000483122 KMT2CQ8NEZ4 4911 aaKnown RBP6.57□□□□□ -1.36
VTI1A-205ENST00000483122 RYR2Q92736 4967 aa6.56□□□□□ -1.36
VTI1A-205ENST00000483122 DNAH2Q9P225 4427 aa6.56□□□□□ -1.36
VTI1A-205ENST00000483122 CRIPTQ9P021 101 aa6.54□□□□□ -1.36
VTI1A-205ENST00000483122 DNAH11Q96DT5 4516 aa6.52□□□□□ -1.37
VTI1A-205ENST00000483122 FLG2Q5D862 2391 aaPredicted RBP6.51□□□□□ -1.37
VTI1A-205ENST00000483122 A0A1B0GU33 70 aa6.5□□□□□ -1.37
VTI1A-205ENST00000483122 P0C880 135 aa6.48□□□□□ -1.37
VTI1A-205ENST00000483122 RYR3Q15413 4870 aa6.48□□□□□ -1.37
VTI1A-205ENST00000483122 H1FX-AS1Q4G0G2 97 aa6.47□□□□□ -1.37
VTI1A-205ENST00000483122 LCE2DQ5TA82 110 aaPredicted RBP6.47□□□□□ -1.37
VTI1A-205ENST00000483122 DNAH5Q8TE73 4624 aa6.43□□□□□ -1.38
VTI1A-205ENST00000483122 FAT2Q9NYQ8 4349 aa6.42□□□□□ -1.38
VTI1A-205ENST00000483122 KRTAP3-1Q9BYR8 98 aa6.41□□□□□ -1.38
VTI1A-205ENST00000483122 KRTAP1-4P0C5Y4 121 aa6.39□□□□□ -1.39
VTI1A-205ENST00000483122 A0A1B0GVY2 172 aa6.38□□□□□ -1.39
VTI1A-205ENST00000483122 LRP1BQ9NZR2 4599 aa6.38□□□□□ -1.39
VTI1A-205ENST00000483122 PKD1P98161 4303 aa6.37□□□□□ -1.39
VTI1A-205ENST00000483122 KRTAP10-2P60368 255 aa6.36□□□□□ -1.39
VTI1A-205ENST00000483122 K7ERS5 55 aa6.35□□□□□ -1.39
VTI1A-205ENST00000483122 COX6B2Q6YFQ2 88 aa6.35□□□□□ -1.39
VTI1A-205ENST00000483122 VPS13BQ7Z7G8 4022 aa6.29□□□□□ -1.4
VTI1A-205ENST00000483122 TPRXLQ17RH7 258 aa6.28□□□□□ -1.4
VTI1A-205ENST00000483122 C9orf92A6NGG3 77 aa6.28□□□□□ -1.4
VTI1A-205ENST00000483122 SPINT4Q6UDR6 99 aa6.28□□□□□ -1.4
VTI1A-205ENST00000483122 KRTAP10-1P60331 282 aa6.27□□□□□ -1.41
VTI1A-205ENST00000483122 DYNC1H1Q14204 4646 aaKnown RBP6.27□□□□□ -1.41
VTI1A-205ENST00000483122 PKHD1P08F94 4074 aa6.27□□□□□ -1.41
VTI1A-205ENST00000483122 EPPK1P58107 5090 aaKnown RBP6.24□□□□□ -1.41
VTI1A-205ENST00000483122 C20orf166-AS1Q96NR2 134 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms