RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ERC2-IT1O76042 136 aa4.06□□□□□ -1.76
CSDE1-206ENST00000483030 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
CSDE1-206ENST00000483030 NOTCH2NLQ7Z3S9 236 aa4.06□□□□□ -1.76
CSDE1-206ENST00000483030 NHP2Q9NX24 153 aaKnown RBP4.06□□□□□ -1.76
CSDE1-206ENST00000483030 TRBV10-3A0A0K0K1G6 114 aa4.05□□□□□ -1.76
CSDE1-206ENST00000483030 MYMXA0A1B0GTQ4 84 aa4.05□□□□□ -1.76
CSDE1-206ENST00000483030 LEPROTL1O95214 131 aa4.05□□□□□ -1.76
CSDE1-206ENST00000483030 CFC1BP0CG36 223 aa4.05□□□□□ -1.76
CSDE1-206ENST00000483030 FXYD2P54710 66 aa4.05□□□□□ -1.76
CSDE1-206ENST00000483030 PCOTHQ58A44 107 aa4.05□□□□□ -1.76
CSDE1-206ENST00000483030 IGLV8-61A0A075B6I0 122 aa4.04□□□□□ -1.76
CSDE1-206ENST00000483030 PSPHP1O15172 72 aa4.04□□□□□ -1.76
CSDE1-206ENST00000483030 NDUFC1O43677 76 aa4.04□□□□□ -1.76
CSDE1-206ENST00000483030 CCKP06307 115 aa4.04□□□□□ -1.76
CSDE1-206ENST00000483030 CXCL6P80162 114 aa4.04□□□□□ -1.76
CSDE1-206ENST00000483030 MIR7-3HGQ8N6C7 128 aa4.04□□□□□ -1.76
CSDE1-206ENST00000483030 LINC00313P59037 77 aa4.03□□□□□ -1.76
CSDE1-206ENST00000483030 KRTAP10-6P60371 365 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-206ENST00000483030 TMEM223A0PJW6 202 aa4.02□□□□□ -1.77
CSDE1-206ENST00000483030 K7ERJ3 54 aa4.02□□□□□ -1.77
CSDE1-206ENST00000483030 IFI27L1Q96BM0 104 aa4.02□□□□□ -1.77
CSDE1-206ENST00000483030 Q9BRP9 147 aa4.02□□□□□ -1.77
CSDE1-206ENST00000483030 C9orf92A6NGG3 77 aa4.01□□□□□ -1.77
CSDE1-206ENST00000483030 C6orf99Q4VX62 202 aa4.01□□□□□ -1.77
CSDE1-206ENST00000483030 C7orf65Q6ZTY9 151 aa4.01□□□□□ -1.77
CSDE1-206ENST00000483030 CYSTM1Q9H1C7 97 aa4.01□□□□□ -1.77
CSDE1-206ENST00000483030 M0R2T5 61 aa4□□□□□ -1.77
CSDE1-206ENST00000483030 Q6ZRX8 168 aa4□□□□□ -1.77
CSDE1-206ENST00000483030 IGHV6-1A0A0B4J1U7 121 aa3.99□□□□□ -1.77
CSDE1-206ENST00000483030 ATP11AUNQ6ZP68 121 aa3.99□□□□□ -1.77
CSDE1-206ENST00000483030 A0A0B4J2C4 111 aa3.98□□□□□ -1.77
CSDE1-206ENST00000483030 TRBV10-2A0A0K0K1G8 114 aa3.98□□□□□ -1.77
CSDE1-206ENST00000483030 Q1T7F1 81 aa3.98□□□□□ -1.77
CSDE1-206ENST00000483030 LINC01554Q52M75 96 aa3.98□□□□□ -1.77
CSDE1-206ENST00000483030 ST20-AS1Q8NBB2 130 aa3.98□□□□□ -1.77
CSDE1-206ENST00000483030 TRAV12-1A0A0B4J245 112 aa3.97□□□□□ -1.77
CSDE1-206ENST00000483030 LOC107984156A0A0G2JMH3 177 aa3.97□□□□□ -1.77
CSDE1-206ENST00000483030 H7BZZ5 65 aa3.97□□□□□ -1.77
CSDE1-206ENST00000483030 RBM3P98179 157 aaKnown RBP3.97□□□□□ -1.77
CSDE1-206ENST00000483030 KLKP1Q107X0 134 aa3.97□□□□□ -1.77
CSDE1-206ENST00000483030 S100A7L2Q5SY68 101 aa3.97□□□□□ -1.77
CSDE1-206ENST00000483030 ARL17AQ8IVW1 177 aa3.97□□□□□ -1.77
CSDE1-206ENST00000483030 FAM218AQ96MZ4 157 aa3.97□□□□□ -1.77
CSDE1-206ENST00000483030 LIMD2Q9BT23 127 aa3.97□□□□□ -1.77
CSDE1-206ENST00000483030 TRAV13-2A0A0B4J235 113 aa3.96□□□□□ -1.78
CSDE1-206ENST00000483030 IGLV6-57P01721 117 aa3.96□□□□□ -1.78
CSDE1-206ENST00000483030 TRAV23DV6A0A075B6W5 121 aa3.95□□□□□ -1.78
CSDE1-206ENST00000483030 TSPEAR-AS2P59090 65 aa3.95□□□□□ -1.78
CSDE1-206ENST00000483030 ATXN8Q156A1 80 aa3.95□□□□□ -1.78
CSDE1-206ENST00000483030 COX6B2Q6YFQ2 88 aa3.95□□□□□ -1.78
CSDE1-206ENST00000483030 A6NN06 94 aa3.94□□□□□ -1.78
CSDE1-206ENST00000483030 HIST1H4GQ99525 98 aa3.94□□□□□ -1.78
CSDE1-206ENST00000483030 LEPROTO15243 131 aa3.93□□□□□ -1.78
CSDE1-206ENST00000483030 SPRR1BP22528 89 aa3.93□□□□□ -1.78
CSDE1-206ENST00000483030 Q6JHZ5 121 aa3.93□□□□□ -1.78
CSDE1-206ENST00000483030 TEX49A0A1B0GTD5 131 aa3.92□□□□□ -1.78
CSDE1-206ENST00000483030 A0A1B0GW54 56 aa3.92□□□□□ -1.78
CSDE1-206ENST00000483030 H7C2G1 150 aa3.92□□□□□ -1.78
CSDE1-206ENST00000483030 SOSTDC1Q6X4U4 206 aa3.92□□□□□ -1.78
CSDE1-206ENST00000483030 RPL37P61927 97 aaKnown RBP3.91□□□□□ -1.78
CSDE1-206ENST00000483030 TRAV7A0A075B6U4 112 aa3.9□□□□□ -1.79
CSDE1-206ENST00000483030 Q1RN00 199 aa3.9□□□□□ -1.79
CSDE1-206ENST00000483030 ADAMTSL4-AS1Q5T5F5 129 aa3.9□□□□□ -1.79
CSDE1-206ENST00000483030 DEFB105AQ8NG35 78 aa3.9□□□□□ -1.79
CSDE1-206ENST00000483030 DHRS4-AS1Q9P1J3 65 aa3.9□□□□□ -1.79
CSDE1-206ENST00000483030 PLNP26678 52 aa3.89□□□□□ -1.79
CSDE1-206ENST00000483030 C20orf197Q8N268 126 aa3.89□□□□□ -1.79
CSDE1-206ENST00000483030 A0A0G2JQZ4 141 aa3.88□□□□□ -1.79
CSDE1-206ENST00000483030 A0A0J9YXY3 114 aa3.88□□□□□ -1.79
CSDE1-206ENST00000483030 ATP5EP2Q5VTU8 51 aa3.88□□□□□ -1.79
CSDE1-206ENST00000483030 CLEC2BQ92478 149 aa3.88□□□□□ -1.79
CSDE1-206ENST00000483030 PRO1854Q9UHT4 67 aa3.88□□□□□ -1.79
CSDE1-206ENST00000483030 FLGP20930 4061 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-206ENST00000483030 COX7BP24311 80 aa3.86□□□□□ -1.79
CSDE1-206ENST00000483030 ELOF1P60002 83 aaKnown RBP3.86□□□□□ -1.79
CSDE1-206ENST00000483030 SMIM29Q86T20 159 aa3.86□□□□□ -1.79
CSDE1-206ENST00000483030 CYP4F30PQ9H0H9 118 aa3.86□□□□□ -1.79
CSDE1-206ENST00000483030 F8WEM9 126 aa3.85□□□□□ -1.79
CSDE1-206ENST00000483030 LINC00308Q8TCZ7 52 aa3.85□□□□□ -1.79
CSDE1-206ENST00000483030 COX6CP09669 75 aa3.84□□□□□ -1.79
CSDE1-206ENST00000483030 CFC1P0CG37 223 aa3.84□□□□□ -1.79
CSDE1-206ENST00000483030 LITAFQ99732 161 aa3.84□□□□□ -1.79
CSDE1-206ENST00000483030 IGLV5-48A0A075B6I7 105 aa3.82□□□□□ -1.8
CSDE1-206ENST00000483030 USH2AO75445 5202 aa3.81□□□□□ -1.8
CSDE1-206ENST00000483030 SSPOA2VEC9 5147 aa3.81□□□□□ -1.8
CSDE1-206ENST00000483030 hDV103S1A0JD37 113 aa3.8□□□□□ -1.8
CSDE1-206ENST00000483030 HCG22E2RYF7 251 aa3.8□□□□□ -1.8
CSDE1-206ENST00000483030 OBSCN-AS1Q96MR7 158 aa3.8□□□□□ -1.8
CSDE1-206ENST00000483030 TRAV22A0A0B4J277 110 aa3.79□□□□□ -1.8
CSDE1-206ENST00000483030 ZNF815PA8K554 130 aa3.79□□□□□ -1.8
CSDE1-206ENST00000483030 CDC42SE1Q9NRR8 79 aa3.79□□□□□ -1.8
CSDE1-206ENST00000483030 SPTSSBQ8NFR3 76 aa3.78□□□□□ -1.8
CSDE1-206ENST00000483030 TTTY13Q9BZ97 58 aa3.78□□□□□ -1.8
CSDE1-206ENST00000483030 KRTAP16-1A8MUX0 517 aa3.77□□□□□ -1.81
CSDE1-206ENST00000483030 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
CSDE1-206ENST00000483030 Q5VV11 94 aa3.76□□□□□ -1.81
CSDE1-206ENST00000483030 Q96NJ1 140 aa3.76□□□□□ -1.81
CSDE1-206ENST00000483030 MT2AP02795 61 aa3.75□□□□□ -1.81
CSDE1-206ENST00000483030 IGFL1Q6UW32 110 aa3.74□□□□□ -1.81
CSDE1-206ENST00000483030 MUSTN1Q8IVN3 82 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms