RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 RAB37Q96AX2 223 aa1.7□□□□□ -2.14
SHQ1-208ENST00000482785 C20orf78Q9BR46 151 aa1.7□□□□□ -2.14
SHQ1-208ENST00000482785 I3L3M4 83 aa1.69□□□□□ -2.14
SHQ1-208ENST00000482785 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
SHQ1-208ENST00000482785 HBDP02042 147 aa1.69□□□□□ -2.14
SHQ1-208ENST00000482785 MRPL54Q6P161 138 aaKnown RBP1.69□□□□□ -2.14
SHQ1-208ENST00000482785 C2orf82Q6UX34 121 aa1.69□□□□□ -2.14
SHQ1-208ENST00000482785 ST20Q9HBF5 79 aa1.69□□□□□ -2.14
SHQ1-208ENST00000482785 D6R8Y8 96 aa1.68□□□□□ -2.14
SHQ1-208ENST00000482785 K7EMI3 77 aa1.68□□□□□ -2.14
SHQ1-208ENST00000482785 CCL25O15444 150 aa1.68□□□□□ -2.14
SHQ1-208ENST00000482785 ZNF25P17030 456 aaPredicted RBP1.68□□□□□ -2.14
SHQ1-208ENST00000482785 AKR1D1P51857 326 aa1.68□□□□□ -2.14
SHQ1-208ENST00000482785 POLR2KP53803 58 aaKnown RBP1.68□□□□□ -2.14
SHQ1-208ENST00000482785 C1orf137Q5JT78 98 aa1.68□□□□□ -2.14
SHQ1-208ENST00000482785 FP248Q71RG6 208 aaPredicted RBP1.68□□□□□ -2.14
SHQ1-208ENST00000482785 CLEC2BQ92478 149 aa1.68□□□□□ -2.14
SHQ1-208ENST00000482785 NXT2Q9NPJ8 142 aaKnown RBP1.68□□□□□ -2.14
SHQ1-208ENST00000482785 ERG28Q9UKR5 140 aa1.68□□□□□ -2.14
SHQ1-208ENST00000482785 GVQW2A0A096LPI5 108 aaPredicted RBP1.67□□□□□ -2.14
SHQ1-208ENST00000482785 LINC00959A0A1B0GUT2 108 aa1.67□□□□□ -2.14
SHQ1-208ENST00000482785 LINC01549A6NIU2 74 aa1.67□□□□□ -2.14
SHQ1-208ENST00000482785 ERC2-IT1O76042 136 aa1.67□□□□□ -2.14
SHQ1-208ENST00000482785 TRACP01848 142 aa1.67□□□□□ -2.14
SHQ1-208ENST00000482785 FCER1GP30273 86 aa1.67□□□□□ -2.14
SHQ1-208ENST00000482785 KRTAP8-1Q8IUC2 63 aa1.67□□□□□ -2.14
SHQ1-208ENST00000482785 Q8N8P6 123 aa1.67□□□□□ -2.14
SHQ1-208ENST00000482785 RPL39LQ96EH5 51 aaKnown RBP1.67□□□□□ -2.14
SHQ1-208ENST00000482785 SMIM2Q9BVW6 85 aa1.67□□□□□ -2.14
SHQ1-208ENST00000482785 CDC42SE2Q9NRR3 84 aa1.67□□□□□ -2.14
SHQ1-208ENST00000482785 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.66□□□□□ -2.14
SHQ1-208ENST00000482785 IGKV2-29A2NJV5 120 aaPredicted RBP1.66□□□□□ -2.14
SHQ1-208ENST00000482785 LINC01546A6NGU7 62 aa1.66□□□□□ -2.14
SHQ1-208ENST00000482785 IFI27P40305 119 aaPredicted RBP1.66□□□□□ -2.14
SHQ1-208ENST00000482785 CLPSL2Q6UWE3 100 aa1.66□□□□□ -2.14
SHQ1-208ENST00000482785 TEN1Q86WV5 123 aa1.66□□□□□ -2.14
SHQ1-208ENST00000482785 COA5Q86WW8 74 aa1.66□□□□□ -2.14
SHQ1-208ENST00000482785 TMEM141Q96I45 108 aa1.66□□□□□ -2.14
SHQ1-208ENST00000482785 LINC00474Q9P2X8 69 aa1.66□□□□□ -2.14
SHQ1-208ENST00000482785 K7ERU9 68 aa1.65□□□□□ -2.15
SHQ1-208ENST00000482785 COX6A2Q02221 97 aa1.65□□□□□ -2.15
SHQ1-208ENST00000482785 BAGE3Q86Y29 109 aa1.65□□□□□ -2.15
SHQ1-208ENST00000482785 C18orf32Q8TCD1 76 aa1.65□□□□□ -2.15
SHQ1-208ENST00000482785 UBE2D4Q9Y2X8 147 aa1.65□□□□□ -2.15
SHQ1-208ENST00000482785 IGIPA6NJ69 53 aa1.64□□□□□ -2.15
SHQ1-208ENST00000482785 SEC11AP67812 179 aa1.64□□□□□ -2.15
SHQ1-208ENST00000482785 C2orf88Q9BSF0 95 aa1.64□□□□□ -2.15
SHQ1-208ENST00000482785 A0A096LNI7 61 aa1.63□□□□□ -2.15
SHQ1-208ENST00000482785 IGKV3OR2-268A0A0C4DH90 116 aa1.63□□□□□ -2.15
SHQ1-208ENST00000482785 RPL39P62891 51 aaKnown RBP1.63□□□□□ -2.15
SHQ1-208ENST00000482785 AMELXQ99217 191 aa1.63□□□□□ -2.15
SHQ1-208ENST00000482785 LCE3DQ9BYE3 92 aa1.63□□□□□ -2.15
SHQ1-208ENST00000482785 MRPL35Q9NZE8 188 aaKnown RBP1.63□□□□□ -2.15
SHQ1-208ENST00000482785 FAM236AA0A1B0GUQ0 79 aa1.62□□□□□ -2.15
SHQ1-208ENST00000482785 FAM236BA0A1B0GV22 79 aa1.62□□□□□ -2.15
SHQ1-208ENST00000482785 NUPR1O60356 82 aa1.62□□□□□ -2.15
SHQ1-208ENST00000482785 LEPROTL1O95214 131 aa1.62□□□□□ -2.15
SHQ1-208ENST00000482785 PMCHL1Q16048 86 aa1.62□□□□□ -2.15
SHQ1-208ENST00000482785 CASC2Q6XLA1 102 aa1.62□□□□□ -2.15
SHQ1-208ENST00000482785 Q6ZUT4 128 aa1.62□□□□□ -2.15
SHQ1-208ENST00000482785 C5orf38Q86SI9 138 aa1.62□□□□□ -2.15
SHQ1-208ENST00000482785 FAM19A2Q8N3H0 131 aa1.62□□□□□ -2.15
SHQ1-208ENST00000482785 IFI27L1Q96BM0 104 aa1.62□□□□□ -2.15
SHQ1-208ENST00000482785 LINC00526Q96FQ7 95 aa1.62□□□□□ -2.15
SHQ1-208ENST00000482785 OBSCNQ5VST9 7968 aa1.61□□□□□ -2.15
SHQ1-208ENST00000482785 TRBV30A0A0K0K1B3 111 aa1.61□□□□□ -2.15
SHQ1-208ENST00000482785 A0A1B0GV90 55 aa1.61□□□□□ -2.15
SHQ1-208ENST00000482785 F8VRH5 84 aa1.61□□□□□ -2.15
SHQ1-208ENST00000482785 H3BRM9 83 aa1.61□□□□□ -2.15
SHQ1-208ENST00000482785 NDUFA1O15239 70 aa1.61□□□□□ -2.15
SHQ1-208ENST00000482785 IGLC3P0DOY3 106 aa1.61□□□□□ -2.15
SHQ1-208ENST00000482785 PLNP26678 52 aa1.61□□□□□ -2.15
SHQ1-208ENST00000482785 SPAG11BQ08648 103 aa1.61□□□□□ -2.15
SHQ1-208ENST00000482785 C9orf116Q5BN46 136 aaPredicted RBP1.61□□□□□ -2.15
SHQ1-208ENST00000482785 UNQ6190/PRO20217Q6UXQ8 127 aa1.61□□□□□ -2.15
SHQ1-208ENST00000482785 ATOH7Q8N100 152 aa1.61□□□□□ -2.15
SHQ1-208ENST00000482785 ORMDL1Q9P0S3 153 aa1.61□□□□□ -2.15
SHQ1-208ENST00000482785 C6orf48Q9UBA6 75 aa1.61□□□□□ -2.15
SHQ1-208ENST00000482785 TRBV20-1A0A075B6N2 111 aa1.6□□□□□ -2.15
SHQ1-208ENST00000482785 C20orf202A1L168 122 aa1.6□□□□□ -2.15
SHQ1-208ENST00000482785 LINC00587B1AMM8 73 aa1.6□□□□□ -2.15
SHQ1-208ENST00000482785 SYS1-DBNDD2H3BUS1 97 aa1.6□□□□□ -2.15
SHQ1-208ENST00000482785 DLEU1O43261 78 aa1.6□□□□□ -2.15
SHQ1-208ENST00000482785 COX7CP15954 63 aa1.6□□□□□ -2.15
SHQ1-208ENST00000482785 KRTDAPP60985 99 aa1.6□□□□□ -2.15
SHQ1-208ENST00000482785 MIR22HGQ0VDD5 57 aa1.6□□□□□ -2.15
SHQ1-208ENST00000482785 TMEM170BQ5T4T1 132 aa1.6□□□□□ -2.15
SHQ1-208ENST00000482785 LINC01545Q5VT33 79 aa1.6□□□□□ -2.15
SHQ1-208ENST00000482785 SFTA2Q6UW10 78 aa1.6□□□□□ -2.15
SHQ1-208ENST00000482785 Q8IZM0 81 aa1.6□□□□□ -2.15
SHQ1-208ENST00000482785 CDKN2A-AS1Q9UH64 79 aa1.6□□□□□ -2.15
SHQ1-208ENST00000482785 F8W1H4 67 aa1.59□□□□□ -2.15
SHQ1-208ENST00000482785 IGKCP01834 107 aa1.59□□□□□ -2.15
SHQ1-208ENST00000482785 SPINK8P0C7L1 97 aa1.59□□□□□ -2.15
SHQ1-208ENST00000482785 C3orf79P0CE67 100 aa1.59□□□□□ -2.15
SHQ1-208ENST00000482785 KRTAP13-4Q3LI77 160 aa1.59□□□□□ -2.15
SHQ1-208ENST00000482785 LCE3AQ5TA76 89 aa1.59□□□□□ -2.15
SHQ1-208ENST00000482785 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.59□□□□□ -2.15
SHQ1-208ENST00000482785 COX7B2Q8TF08 81 aa1.59□□□□□ -2.15
SHQ1-208ENST00000482785 LOC107984156A0A0G2JMH3 177 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms