RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 F8P00451 2351 aa0.94□□□□□ -2.26
SF3B1-210ENST00000482158 USP24Q9UPU5 2620 aa0.94□□□□□ -2.26
SF3B1-210ENST00000482158 FRYLO94915 3013 aa0.94□□□□□ -2.26
SF3B1-210ENST00000482158 CSPG4Q6UVK1 2322 aa0.93□□□□□ -2.26
SF3B1-210ENST00000482158 FREM2Q5SZK8 3169 aa0.93□□□□□ -2.26
SF3B1-210ENST00000482158 POLQO75417 2590 aa0.93□□□□□ -2.26
SF3B1-210ENST00000482158 USP9XQ93008 2570 aaPredicted RBP0.93□□□□□ -2.26
SF3B1-210ENST00000482158 SONP18583 2426 aaKnown RBP0.93□□□□□ -2.26
SF3B1-210ENST00000482158 DEFB133Q30KQ1 61 aa0.93□□□□□ -2.26
SF3B1-210ENST00000482158 LRRK2Q5S007 2527 aa0.93□□□□□ -2.26
SF3B1-210ENST00000482158 MGAQ8IWI9 3026 aa0.93□□□□□ -2.26
SF3B1-210ENST00000482158 ABCA2Q9BZC7 2435 aa0.93□□□□□ -2.26
SF3B1-210ENST00000482158 CELSR3Q9NYQ7 3312 aa0.92□□□□□ -2.26
SF3B1-210ENST00000482158 TLN1Q9Y490 2541 aaKnown RBP0.92□□□□□ -2.26
SF3B1-210ENST00000482158 CHD6Q8TD26 2715 aa0.92□□□□□ -2.26
SF3B1-210ENST00000482158 WT1-ASQ06250 92 aa0.92□□□□□ -2.26
SF3B1-210ENST00000482158 DEFB109BQ30KR1 87 aa0.92□□□□□ -2.26
SF3B1-210ENST00000482158 WFDC10BQ8IUB3 73 aa0.92□□□□□ -2.26
SF3B1-210ENST00000482158 DEFB106AQ8N104 65 aa0.92□□□□□ -2.26
SF3B1-210ENST00000482158 FRYQ5TBA9 3013 aa0.91□□□□□ -2.26
SF3B1-210ENST00000482158 ABCA12Q86UK0 2595 aa0.91□□□□□ -2.26
SF3B1-210ENST00000482158 TENM3Q9P273 2699 aa0.91□□□□□ -2.26
SF3B1-210ENST00000482158 KAAG1Q9UBP8 84 aa0.91□□□□□ -2.26
SF3B1-210ENST00000482158 U3KQA8 63 aa0.91□□□□□ -2.26
SF3B1-210ENST00000482158 DSPP15924 2871 aaKnown RBP0.91□□□□□ -2.26
SF3B1-210ENST00000482158 SPTBN5Q9NRC6 3674 aaKnown RBP0.9□□□□□ -2.27
SF3B1-210ENST00000482158 CCDC168Q8NDH2 2452 aa0.9□□□□□ -2.27
SF3B1-210ENST00000482158 LOC400499M0QZD8 3231 aa0.9□□□□□ -2.27
SF3B1-210ENST00000482158 IGLV5-48A0A075B6I7 105 aa0.9□□□□□ -2.27
SF3B1-210ENST00000482158 SPEGQ15772 3267 aa0.9□□□□□ -2.27
SF3B1-210ENST00000482158 ACANP16112 2415 aa0.9□□□□□ -2.27
SF3B1-210ENST00000482158 MEGF8Q7Z7M0 2845 aa0.9□□□□□ -2.27
SF3B1-210ENST00000482158 WNK1Q9H4A3 2382 aa0.9□□□□□ -2.27
SF3B1-210ENST00000482158 USP9YO00507 2555 aaPredicted RBP0.9□□□□□ -2.27
SF3B1-210ENST00000482158 ATMQ13315 3056 aa0.9□□□□□ -2.27
SF3B1-210ENST00000482158 COL12A1Q99715 3063 aa0.9□□□□□ -2.27
SF3B1-210ENST00000482158 TEP1Q99973 2627 aaKnown RBP0.89□□□□□ -2.27
SF3B1-210ENST00000482158 CEP295Q9C0D2 2601 aa0.89□□□□□ -2.27
SF3B1-210ENST00000482158 AKAP13Q12802 2813 aa0.89□□□□□ -2.27
SF3B1-210ENST00000482158 COX14Q96I36 57 aa0.89□□□□□ -2.27
SF3B1-210ENST00000482158 NBEAQ8NFP9 2946 aa0.89□□□□□ -2.27
SF3B1-210ENST00000482158 IGSF10Q6WRI0 2623 aa0.89□□□□□ -2.27
SF3B1-210ENST00000482158 SETXQ7Z333 2677 aaKnown RBP0.89□□□□□ -2.27
SF3B1-210ENST00000482158 GCN1Q92616 2671 aaKnown RBP0.89□□□□□ -2.27
SF3B1-210ENST00000482158 MMP24-AS1A0A0U1RRL7 71 aa0.88□□□□□ -2.27
SF3B1-210ENST00000482158 S4R3F8 94 aa0.88□□□□□ -2.27
SF3B1-210ENST00000482158 ITPR2Q14571 2701 aa0.88□□□□□ -2.27
SF3B1-210ENST00000482158 MYO15AQ9UKN7 3530 aa0.88□□□□□ -2.27
SF3B1-210ENST00000482158 MTORP42345 2549 aa0.88□□□□□ -2.27
SF3B1-210ENST00000482158 TLN2Q9Y4G6 2542 aa0.88□□□□□ -2.27
SF3B1-210ENST00000482158 KALRNO60229 2985 aa0.88□□□□□ -2.27
SF3B1-210ENST00000482158 CRYBG3Q68DQ2 2970 aa0.88□□□□□ -2.27
SF3B1-210ENST00000482158 ITPR3Q14573 2671 aa0.88□□□□□ -2.27
SF3B1-210ENST00000482158 ZZEF1O43149 2961 aa0.87□□□□□ -2.27
SF3B1-210ENST00000482158 HECTD1Q9ULT8 2610 aa0.87□□□□□ -2.27
SF3B1-210ENST00000482158 DNAH14Q0VDD8 3507 aa0.87□□□□□ -2.27
SF3B1-210ENST00000482158 BOD1L1Q8NFC6 3051 aa0.87□□□□□ -2.27
SF3B1-210ENST00000482158 H3BUA1 57 aa0.87□□□□□ -2.27
SF3B1-210ENST00000482158 POLR2KP53803 58 aaKnown RBP0.87□□□□□ -2.27
SF3B1-210ENST00000482158 ASPMQ8IZT6 3477 aa0.87□□□□□ -2.27
SF3B1-210ENST00000482158 MAST4O15021 2626 aa0.87□□□□□ -2.27
SF3B1-210ENST00000482158 ATRQ13535 2644 aa0.87□□□□□ -2.27
SF3B1-210ENST00000482158 PRRC2CQ9Y520 2896 aaKnown RBP0.87□□□□□ -2.27
SF3B1-210ENST00000482158 ANKHD1Q8IWZ3 2542 aaKnown RBP0.87□□□□□ -2.27
SF3B1-210ENST00000482158 H0YGG7 62 aa0.86□□□□□ -2.27
SF3B1-210ENST00000482158 DEFB131AP59861 70 aa0.86□□□□□ -2.27
SF3B1-210ENST00000482158 RPL39P62891 51 aaKnown RBP0.86□□□□□ -2.27
SF3B1-210ENST00000482158 PRLHP81277 87 aa0.86□□□□□ -2.27
SF3B1-210ENST00000482158 DEFB110Q30KQ9 67 aa0.86□□□□□ -2.27
SF3B1-210ENST00000482158 UTP20O75691 2785 aaKnown RBP0.85□□□□□ -2.27
SF3B1-210ENST00000482158 UBR5O95071 2799 aaPredicted RBP0.85□□□□□ -2.27
SF3B1-210ENST00000482158 STATHP02808 62 aa0.85□□□□□ -2.27
SF3B1-210ENST00000482158 TENM4Q6N022 2769 aa0.85□□□□□ -2.27
SF3B1-210ENST00000482158 ARHGAP5-AS1Q96IT6 56 aa0.85□□□□□ -2.27
SF3B1-210ENST00000482158 CELSR2Q9HCU4 2923 aa0.85□□□□□ -2.27
SF3B1-210ENST00000482158 CENPEQ02224 2701 aa0.85□□□□□ -2.27
SF3B1-210ENST00000482158 SETD2Q9BYW2 2564 aaPredicted RBP0.85□□□□□ -2.27
SF3B1-210ENST00000482158 UNC79Q9P2D8 2635 aa0.85□□□□□ -2.27
SF3B1-210ENST00000482158 APCP25054 2843 aa0.84□□□□□ -2.27
SF3B1-210ENST00000482158 HIVEP1P15822 2718 aa0.84□□□□□ -2.27
SF3B1-210ENST00000482158 TEX15Q9BXT5 2789 aa0.84□□□□□ -2.27
SF3B1-210ENST00000482158 ADGRG4Q8IZF6 3080 aa0.84□□□□□ -2.28
SF3B1-210ENST00000482158 CELSR1Q9NYQ6 3014 aa0.83□□□□□ -2.28
SF3B1-210ENST00000482158 COL6A5A8TX70 2615 aa0.83□□□□□ -2.28
SF3B1-210ENST00000482158 RPL39LQ96EH5 51 aaKnown RBP0.83□□□□□ -2.28
SF3B1-210ENST00000482158 SMR3AQ99954 134 aa0.83□□□□□ -2.28
SF3B1-210ENST00000482158 FLNCQ14315 2725 aa0.83□□□□□ -2.28
SF3B1-210ENST00000482158 NBPF19A0A087WUL8 3843 aa0.83□□□□□ -2.28
SF3B1-210ENST00000482158 FLNAP21333 2647 aaKnown RBP0.83□□□□□ -2.28
SF3B1-210ENST00000482158 DMDP11532 3685 aa0.82□□□□□ -2.28
SF3B1-210ENST00000482158 PDZD2O15018 2839 aa0.82□□□□□ -2.28
SF3B1-210ENST00000482158 NIPBLQ6KC79 2804 aaeCLIP0.82□□□□□ -2.28
SF3B1-210ENST00000482158 DEFB108AA8MXU0 73 aa0.82□□□□□ -2.28
SF3B1-210ENST00000482158 DCHS2Q6V1P9 2916 aa0.82□□□□□ -2.28
SF3B1-210ENST00000482158 MAP1AP78559 2803 aaPredicted RBP0.82□□□□□ -2.28
SF3B1-210ENST00000482158 ZFHX4Q86UP3 3567 aa0.82□□□□□ -2.28
SF3B1-210ENST00000482158 OTOGQ6ZRI0 2925 aa0.82□□□□□ -2.28
SF3B1-210ENST00000482158 RELNP78509 3460 aa0.81□□□□□ -2.28
SF3B1-210ENST00000482158 ITPR1Q14643 2758 aa0.81□□□□□ -2.28
SF3B1-210ENST00000482158 LAMA5O15230 3695 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms