RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 H0Y9P7 68 aa1.28□□□□□ -2.2
COPA-203ENST00000481040 PDCD5O14737 125 aa1.28□□□□□ -2.2
COPA-203ENST00000481040 Q5BKY6 102 aa1.28□□□□□ -2.2
COPA-203ENST00000481040 DEFB121Q5J5C9 76 aa1.28□□□□□ -2.2
COPA-203ENST00000481040 CD163L1Q9NR16 1453 aa1.27□□□□□ -2.21
COPA-203ENST00000481040 STAB2Q8WWQ8 2551 aa1.27□□□□□ -2.21
COPA-203ENST00000481040 HSPG2P98160 4391 aa1.26□□□□□ -2.21
COPA-203ENST00000481040 SMIM31A0A1B0GVY4 71 aa1.26□□□□□ -2.21
COPA-203ENST00000481040 C6orf201Q7Z4U5 140 aa1.26□□□□□ -2.21
COPA-203ENST00000481040 PKHD1P08F94 4074 aa1.25□□□□□ -2.21
COPA-203ENST00000481040 TRBV6-1A0A0K0K1D8 114 aa1.25□□□□□ -2.21
COPA-203ENST00000481040 GNGT1P63211 74 aa1.25□□□□□ -2.21
COPA-203ENST00000481040 COX6A2Q02221 97 aa1.25□□□□□ -2.21
COPA-203ENST00000481040 FAT2Q9NYQ8 4349 aa1.25□□□□□ -2.21
COPA-203ENST00000481040 HUWE1Q7Z6Z7 4374 aaKnown RBP1.25□□□□□ -2.21
COPA-203ENST00000481040 SYNE2Q8WXH0 6885 aaKnown RBP1.25□□□□□ -2.21
COPA-203ENST00000481040 MYCBP2O75592 4640 aa1.24□□□□□ -2.21
COPA-203ENST00000481040 SMIM13P0DJ93 91 aa1.24□□□□□ -2.21
COPA-203ENST00000481040 S100A3P33764 101 aa1.24□□□□□ -2.21
COPA-203ENST00000481040 PKDREJQ9NTG1 2253 aa1.24□□□□□ -2.21
COPA-203ENST00000481040 ANKRD50Q9ULJ7 1429 aa1.23□□□□□ -2.21
COPA-203ENST00000481040 DNAH9Q9NYC9 4486 aa1.23□□□□□ -2.21
COPA-203ENST00000481040 DNAJC13O75165 2243 aa1.23□□□□□ -2.21
COPA-203ENST00000481040 MYH4Q9Y623 1939 aa1.23□□□□□ -2.21
COPA-203ENST00000481040 DYNC1H1Q14204 4646 aaKnown RBP1.22□□□□□ -2.21
COPA-203ENST00000481040 A0A0D9SFI3 127 aa1.22□□□□□ -2.21
COPA-203ENST00000481040 TRBV7-4A0A0J9YYF1 115 aa1.22□□□□□ -2.21
COPA-203ENST00000481040 RGPD2P0DJD1 1756 aa1.21□□□□□ -2.22
COPA-203ENST00000481040 A0A1B0GU69 56 aa1.21□□□□□ -2.22
COPA-203ENST00000481040 A0A1B0GUT8 65 aa1.21□□□□□ -2.22
COPA-203ENST00000481040 HEPN1Q6WQI6 88 aa1.21□□□□□ -2.22
COPA-203ENST00000481040 DEFB124Q8NES8 71 aa1.21□□□□□ -2.22
COPA-203ENST00000481040 CNFNQ9BYD5 112 aa1.2□□□□□ -2.22
COPA-203ENST00000481040 UMAD1C9J7I0 102 aa1.19□□□□□ -2.22
COPA-203ENST00000481040 KRTAP20-1Q3LI63 56 aa1.19□□□□□ -2.22
COPA-203ENST00000481040 LRP2P98164 4655 aa1.19□□□□□ -2.22
COPA-203ENST00000481040 PLECQ15149 4684 aaKnown RBP1.19□□□□□ -2.22
COPA-203ENST00000481040 FAT1Q14517 4588 aa1.18□□□□□ -2.22
COPA-203ENST00000481040 LINC00959A0A1B0GUT2 108 aa1.18□□□□□ -2.22
COPA-203ENST00000481040 KRTAP19-3Q7Z4W3 81 aa1.18□□□□□ -2.22
COPA-203ENST00000481040 SMR3AQ99954 134 aa1.18□□□□□ -2.22
COPA-203ENST00000481040 DNAH10Q8IVF4 4471 aa1.18□□□□□ -2.22
COPA-203ENST00000481040 DNAH7Q8WXX0 4024 aa1.18□□□□□ -2.22
COPA-203ENST00000481040 SRRM2Q9UQ35 2752 aaKnown RBP1.18□□□□□ -2.22
COPA-203ENST00000481040 MACF1Q9UPN3 7388 aaKnown RBP1.18□□□□□ -2.22
COPA-203ENST00000481040 KNL1Q8NG31 2342 aa1.17□□□□□ -2.22
COPA-203ENST00000481040 ATP5EP2Q5VTU8 51 aa1.17□□□□□ -2.22
COPA-203ENST00000481040 DNAH11Q96DT5 4516 aa1.17□□□□□ -2.22
COPA-203ENST00000481040 FAT3Q8TDW7 4589 aa1.17□□□□□ -2.22
COPA-203ENST00000481040 A0A087WXM4 84 aa1.16□□□□□ -2.22
COPA-203ENST00000481040 IFI27P40305 119 aaPredicted RBP1.16□□□□□ -2.22
COPA-203ENST00000481040 DEFB112Q30KQ8 113 aa1.16□□□□□ -2.22
COPA-203ENST00000481040 LRP1BQ9NZR2 4599 aa1.16□□□□□ -2.22
COPA-203ENST00000481040 TRAV21A0A0B4J279 112 aa1.15□□□□□ -2.23
COPA-203ENST00000481040 TP53AIP1Q9HCN2 124 aa1.15□□□□□ -2.23
COPA-203ENST00000481040 PRO0255Q9UI72 69 aa1.15□□□□□ -2.23
COPA-203ENST00000481040 VPS13DQ5THJ4 4388 aa1.15□□□□□ -2.23
COPA-203ENST00000481040 AHNAK2Q8IVF2 5795 aa1.15□□□□□ -2.23
COPA-203ENST00000481040 STARD9Q9P2P6 4700 aa1.14□□□□□ -2.23
COPA-203ENST00000481040 AKAP6Q13023 2319 aa1.14□□□□□ -2.23
COPA-203ENST00000481040 I3L2K1 104 aa1.14□□□□□ -2.23
COPA-203ENST00000481040 IFI6P09912 130 aa1.14□□□□□ -2.23
COPA-203ENST00000481040 LCE6AA0A183 80 aa1.13□□□□□ -2.23
COPA-203ENST00000481040 NDUFB1O75438 58 aa1.13□□□□□ -2.23
COPA-203ENST00000481040 ALMS1Q8TCU4 4167 aa1.13□□□□□ -2.23
COPA-203ENST00000481040 GOLGA4Q13439 2230 aaKnown RBP1.13□□□□□ -2.23
COPA-203ENST00000481040 AHNAKQ09666 5890 aaKnown RBP1.13□□□□□ -2.23
COPA-203ENST00000481040 APOBP04114 4563 aaKnown RBP1.13□□□□□ -2.23
COPA-203ENST00000481040 USH2AO75445 5202 aa1.12□□□□□ -2.23
COPA-203ENST00000481040 HMGA1P17096 107 aaKnown RBP1.12□□□□□ -2.23
COPA-203ENST00000481040 GAFA1Q96PS6 74 aa1.12□□□□□ -2.23
COPA-203ENST00000481040 KIF20BQ96Q89 1820 aa1.12□□□□□ -2.23
COPA-203ENST00000481040 LRP1Q07954 4544 aaKnown RBP1.12□□□□□ -2.23
COPA-203ENST00000481040 PLCE1Q9P212 2302 aa1.11□□□□□ -2.23
COPA-203ENST00000481040 KMT2DO14686 5537 aa1.11□□□□□ -2.23
COPA-203ENST00000481040 DNAH6Q9C0G6 4158 aa1.11□□□□□ -2.23
COPA-203ENST00000481040 WFDC9Q8NEX5 89 aa1.11□□□□□ -2.23
COPA-203ENST00000481040 MUC12Q9UKN1 5478 aa1.11□□□□□ -2.23
COPA-203ENST00000481040 ANKRD36A6QL64 1941 aa1.11□□□□□ -2.23
COPA-203ENST00000481040 PKHD1L1Q86WI1 4243 aa1.1□□□□□ -2.23
COPA-203ENST00000481040 COX7BP24311 80 aa1.1□□□□□ -2.23
COPA-203ENST00000481040 ANKRD36CQ5JPF3 1778 aa1.09□□□□□ -2.23
COPA-203ENST00000481040 DNAH5Q8TE73 4624 aa1.09□□□□□ -2.23
COPA-203ENST00000481040 H3BVH4 76 aa1.09□□□□□ -2.23
COPA-203ENST00000481040 COX8AP10176 69 aa1.09□□□□□ -2.23
COPA-203ENST00000481040 LELP1Q5T871 98 aa1.09□□□□□ -2.23
COPA-203ENST00000481040 HILPDAQ9Y5L2 63 aa1.09□□□□□ -2.23
COPA-203ENST00000481040 DNAH2Q9P225 4427 aa1.09□□□□□ -2.24
COPA-203ENST00000481040 PIGYQ3MUY2 71 aa1.08□□□□□ -2.24
COPA-203ENST00000481040 DNAH3Q8TD57 4116 aa1.08□□□□□ -2.24
COPA-203ENST00000481040 PKD1P98161 4303 aa1.07□□□□□ -2.24
COPA-203ENST00000481040 A0A087WWC5 75 aa1.07□□□□□ -2.24
COPA-203ENST00000481040 NREPQ16612 68 aa1.07□□□□□ -2.24
COPA-203ENST00000481040 Q8IZM0 81 aa1.07□□□□□ -2.24
COPA-203ENST00000481040 K7EQZ3 153 aa1.06□□□□□ -2.24
COPA-203ENST00000481040 S100ZQ8WXG8 99 aa1.06□□□□□ -2.24
COPA-203ENST00000481040 CRIPTQ9P021 101 aa1.06□□□□□ -2.24
COPA-203ENST00000481040 SPINK6Q6UWN8 80 aa1.05□□□□□ -2.24
COPA-203ENST00000481040 MUC5BQ9HC84 5762 aaPredicted RBP1.05□□□□□ -2.24
COPA-203ENST00000481040 DNAH17Q9UFH2 4485 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms