RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 H3BPC8 53 aa4.95□□□□□ -1.62
USP54-212ENST00000480210 KRTAP1-4P0C5Y4 121 aa4.95□□□□□ -1.62
USP54-212ENST00000480210 SPRR4Q96PI1 79 aa4.95□□□□□ -1.62
USP54-212ENST00000480210 Q9BRP9 147 aa4.95□□□□□ -1.62
USP54-212ENST00000480210 OCR1Q9BZK8 76 aa4.95□□□□□ -1.62
USP54-212ENST00000480210 ABCA13Q86UQ4 5058 aa4.95□□□□□ -1.62
USP54-212ENST00000480210 KTN1-AS1Q86SY8 53 aa4.94□□□□□ -1.62
USP54-212ENST00000480210 MPLKIPQ8TAP9 179 aa4.94□□□□□ -1.62
USP54-212ENST00000480210 FAT3Q8TDW7 4589 aa4.94□□□□□ -1.62
USP54-212ENST00000480210 LCE2BO14633 110 aa4.93□□□□□ -1.62
USP54-212ENST00000480210 KRTAP10-8P60410 259 aa4.93□□□□□ -1.62
USP54-212ENST00000480210 LINC00483Q53H64 154 aa4.93□□□□□ -1.62
USP54-212ENST00000480210 ATP11AUNQ6ZP68 121 aa4.93□□□□□ -1.62
USP54-212ENST00000480210 SPRR1BP22528 89 aa4.92□□□□□ -1.62
USP54-212ENST00000480210 SSBP3-AS1Q7Z2R9 100 aa4.9□□□□□ -1.63
USP54-212ENST00000480210 PRR26Q8N8Z3 221 aa4.9□□□□□ -1.63
USP54-212ENST00000480210 SPANXA2-OT1Q8N9U9 137 aa4.9□□□□□ -1.63
USP54-212ENST00000480210 TYMSOSQ8TAI1 123 aa4.9□□□□□ -1.63
USP54-212ENST00000480210 LRP1Q07954 4544 aaKnown RBP4.9□□□□□ -1.63
USP54-212ENST00000480210 IGLV5-48A0A075B6I7 105 aa4.89□□□□□ -1.63
USP54-212ENST00000480210 MT1HL1P0DM35 61 aa4.89□□□□□ -1.63
USP54-212ENST00000480210 DMBT1Q9UGM3 2413 aaPredicted RBP4.88□□□□□ -1.63
USP54-212ENST00000480210 A0A087X002 238 aa4.88□□□□□ -1.63
USP54-212ENST00000480210 IGKV4-1P06312 121 aa4.88□□□□□ -1.63
USP54-212ENST00000480210 MP68P56378 58 aa4.88□□□□□ -1.63
USP54-212ENST00000480210 SPAG11AQ6PDA7 123 aa4.88□□□□□ -1.63
USP54-212ENST00000480210 Q6ZQY7 126 aa4.88□□□□□ -1.63
USP54-212ENST00000480210 PCLOQ9Y6V0 5065 aa4.88□□□□□ -1.63
USP54-212ENST00000480210 MYCBP2O75592 4640 aa4.87□□□□□ -1.63
USP54-212ENST00000480210 ST20-AS1Q8NBB2 130 aa4.87□□□□□ -1.63
USP54-212ENST00000480210 TRAV22A0A0B4J277 110 aa4.86□□□□□ -1.63
USP54-212ENST00000480210 HCG22E2RYF7 251 aa4.86□□□□□ -1.63
USP54-212ENST00000480210 KRTAP13-2Q52LG2 175 aa4.86□□□□□ -1.63
USP54-212ENST00000480210 C1orf64Q8NEQ6 169 aa4.86□□□□□ -1.63
USP54-212ENST00000480210 DEFB105AQ8NG35 78 aa4.86□□□□□ -1.63
USP54-212ENST00000480210 ANAPC11Q9NYG5 84 aa4.86□□□□□ -1.63
USP54-212ENST00000480210 TNXBP22105 4242 aa4.86□□□□□ -1.63
USP54-212ENST00000480210 ASB16-AS1Q495Z4 193 aa4.85□□□□□ -1.63
USP54-212ENST00000480210 Q8N377 158 aa4.85□□□□□ -1.63
USP54-212ENST00000480210 Q8NBF4 154 aa4.85□□□□□ -1.63
USP54-212ENST00000480210 ZCCHC13Q8WW36 166 aaKnown RBP4.85□□□□□ -1.63
USP54-212ENST00000480210 LINC00304Q8N9R0 145 aa4.84□□□□□ -1.63
USP54-212ENST00000480210 IGLV9-49A0A0B4J1Y8 123 aa4.83□□□□□ -1.64
USP54-212ENST00000480210 RPS29P62273 56 aaKnown RBP4.83□□□□□ -1.64
USP54-212ENST00000480210 Q75L30 129 aa4.83□□□□□ -1.64
USP54-212ENST00000480210 SMIM29Q86T20 159 aa4.83□□□□□ -1.64
USP54-212ENST00000480210 SPINK1P00995 79 aa4.82□□□□□ -1.64
USP54-212ENST00000480210 MOBPQ13875 183 aa4.82□□□□□ -1.64
USP54-212ENST00000480210 IGLV8-61A0A075B6I0 122 aa4.81□□□□□ -1.64
USP54-212ENST00000480210 LOC101927531A0A1B0GV80 90 aa4.81□□□□□ -1.64
USP54-212ENST00000480210 C7orf65Q6ZTY9 151 aa4.81□□□□□ -1.64
USP54-212ENST00000480210 LCA10Q71F78 164 aa4.8□□□□□ -1.64
USP54-212ENST00000480210 LINC00208Q96KT6 92 aa4.8□□□□□ -1.64
USP54-212ENST00000480210 CDC42SE1Q9NRR8 79 aa4.8□□□□□ -1.64
USP54-212ENST00000480210 CHKB-CPT1BH3BT56 60 aa4.79□□□□□ -1.64
USP54-212ENST00000480210 RBM12B-AS1Q9P1G2 102 aa4.79□□□□□ -1.64
USP54-212ENST00000480210 PSPHP1O15172 72 aa4.77□□□□□ -1.65
USP54-212ENST00000480210 Q5VV11 94 aa4.76□□□□□ -1.65
USP54-212ENST00000480210 Q8N9P0 234 aaPredicted RBP4.76□□□□□ -1.65
USP54-212ENST00000480210 A6NED7 52 aa4.75□□□□□ -1.65
USP54-212ENST00000480210 A8MUN3 132 aa4.75□□□□□ -1.65
USP54-212ENST00000480210 IGFL1Q6UW32 110 aa4.74□□□□□ -1.65
USP54-212ENST00000480210 A6NN06 94 aa4.73□□□□□ -1.65
USP54-212ENST00000480210 PRR15LQ9BU68 103 aa4.72□□□□□ -1.65
USP54-212ENST00000480210 LINC01558Q9Y6Z2 57 aa4.72□□□□□ -1.65
USP54-212ENST00000480210 CASC2Q6XLA1 102 aa4.71□□□□□ -1.66
USP54-212ENST00000480210 SPTSSBQ8NFR3 76 aa4.71□□□□□ -1.66
USP54-212ENST00000480210 TP53AIP1Q9HCN2 124 aa4.71□□□□□ -1.66
USP54-212ENST00000480210 PRR4Q16378 134 aa4.7□□□□□ -1.66
USP54-212ENST00000480210 HERC1Q15751 4861 aa4.7□□□□□ -1.66
USP54-212ENST00000480210 IGLV7-46A0A075B6I9 117 aa4.69□□□□□ -1.66
USP54-212ENST00000480210 H0Y9P7 68 aa4.67□□□□□ -1.66
USP54-212ENST00000480210 DSCR10P59022 87 aa4.67□□□□□ -1.66
USP54-212ENST00000480210 Q8N9L7 120 aa4.67□□□□□ -1.66
USP54-212ENST00000480210 A0A0G2JQZ4 141 aa4.66□□□□□ -1.66
USP54-212ENST00000480210 A0A1W2PNM2 257 aa4.66□□□□□ -1.66
USP54-212ENST00000480210 LCE2CQ5TA81 110 aa4.66□□□□□ -1.66
USP54-212ENST00000480210 TPRXLQ17RH7 258 aa4.65□□□□□ -1.67
USP54-212ENST00000480210 LCE2AQ5TA79 106 aaPredicted RBP4.65□□□□□ -1.67
USP54-212ENST00000480210 RETNLBQ9BQ08 111 aa4.65□□□□□ -1.67
USP54-212ENST00000480210 A0A087WSZ3 146 aa4.64□□□□□ -1.67
USP54-212ENST00000480210 C8orf87E5RJ46 101 aa4.63□□□□□ -1.67
USP54-212ENST00000480210 K7EQZ3 153 aa4.63□□□□□ -1.67
USP54-212ENST00000480210 COA5Q86WW8 74 aa4.63□□□□□ -1.67
USP54-212ENST00000480210 HMCN2Q8NDA2 5059 aa4.62□□□□□ -1.67
USP54-212ENST00000480210 A8MWP4 228 aa4.61□□□□□ -1.67
USP54-212ENST00000480210 KRTAP13-3Q3SY46 172 aa4.6□□□□□ -1.67
USP54-212ENST00000480210 LINC01554Q52M75 96 aa4.6□□□□□ -1.67
USP54-212ENST00000480210 LINC00472Q9H8W2 130 aa4.58□□□□□ -1.68
USP54-212ENST00000480210 Q96NJ1 140 aa4.57□□□□□ -1.68
USP54-212ENST00000480210 WFDC13Q8IUB5 93 aa4.56□□□□□ -1.68
USP54-212ENST00000480210 ACYP2P14621 99 aa4.54□□□□□ -1.68
USP54-212ENST00000480210 LORP23490 312 aaPredicted RBP4.54□□□□□ -1.68
USP54-212ENST00000480210 XP32Q5T750 250 aa4.54□□□□□ -1.68
USP54-212ENST00000480210 LRP2P98164 4655 aa4.54□□□□□ -1.68
USP54-212ENST00000480210 LPAP08519 4548 aa4.54□□□□□ -1.68
USP54-212ENST00000480210 SEC61BP60468 96 aaKnown RBP4.53□□□□□ -1.68
USP54-212ENST00000480210 LINC00313P59037 77 aa4.52□□□□□ -1.69
USP54-212ENST00000480210 C9orf92A6NGG3 77 aa4.51□□□□□ -1.69
USP54-212ENST00000480210 A0A1B0GVX0 72 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms