RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 M0R143 59 aa2.69□□□□□ -1.98
PTCD3-213ENST00000480102 Q1RN00 199 aa2.69□□□□□ -1.98
PTCD3-213ENST00000480102 C1orf195Q5TG92 126 aa2.69□□□□□ -1.98
PTCD3-213ENST00000480102 IGFL1Q6UW32 110 aa2.69□□□□□ -1.98
PTCD3-213ENST00000480102 DEFB105AQ8NG35 78 aa2.69□□□□□ -1.98
PTCD3-213ENST00000480102 RETNLBQ9BQ08 111 aa2.69□□□□□ -1.98
PTCD3-213ENST00000480102 SNHG12Q9BXW3 62 aa2.69□□□□□ -1.98
PTCD3-213ENST00000480102 TRBV7-4A0A0J9YYF1 115 aa2.68□□□□□ -1.98
PTCD3-213ENST00000480102 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
PTCD3-213ENST00000480102 OCR1Q9BZK8 76 aa2.68□□□□□ -1.98
PTCD3-213ENST00000480102 V9GYY9 64 aa2.68□□□□□ -1.98
PTCD3-213ENST00000480102 LST1O00453 97 aa2.67□□□□□ -1.98
PTCD3-213ENST00000480102 DNAL4O96015 105 aa2.67□□□□□ -1.98
PTCD3-213ENST00000480102 LYRM7Q5U5X0 104 aa2.67□□□□□ -1.98
PTCD3-213ENST00000480102 ORMDL1Q9P0S3 153 aa2.67□□□□□ -1.98
PTCD3-213ENST00000480102 H3BMG7 143 aa2.66□□□□□ -1.98
PTCD3-213ENST00000480102 PDE6GP18545 87 aa2.66□□□□□ -1.98
PTCD3-213ENST00000480102 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
PTCD3-213ENST00000480102 TRBV20-1A0A075B6N2 111 aa2.65□□□□□ -1.99
PTCD3-213ENST00000480102 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
PTCD3-213ENST00000480102 TSTD3H0UI37 97 aa2.65□□□□□ -1.99
PTCD3-213ENST00000480102 C5orf47Q569G3 176 aa2.65□□□□□ -1.99
PTCD3-213ENST00000480102 JMJD7-PLA2G4BH0Y9G9 81 aa2.64□□□□□ -1.99
PTCD3-213ENST00000480102 PSMB2P49721 201 aa2.64□□□□□ -1.99
PTCD3-213ENST00000480102 RPL37P61927 97 aaKnown RBP2.64□□□□□ -1.99
PTCD3-213ENST00000480102 A0A1W2PNM2 257 aa2.63□□□□□ -1.99
PTCD3-213ENST00000480102 K7ERJ3 54 aa2.63□□□□□ -1.99
PTCD3-213ENST00000480102 ATXN8Q156A1 80 aa2.63□□□□□ -1.99
PTCD3-213ENST00000480102 ANKRD29Q8N6D5 301 aa2.63□□□□□ -1.99
PTCD3-213ENST00000480102 A0A087WSZ3 146 aa2.62□□□□□ -1.99
PTCD3-213ENST00000480102 LOC110117498A0A087WWA1 95 aa2.62□□□□□ -1.99
PTCD3-213ENST00000480102 H3BUT2 72 aa2.62□□□□□ -1.99
PTCD3-213ENST00000480102 FABP2P12104 132 aa2.62□□□□□ -1.99
PTCD3-213ENST00000480102 RBM3P98179 157 aaKnown RBP2.62□□□□□ -1.99
PTCD3-213ENST00000480102 HRCT1Q6UXD1 115 aa2.62□□□□□ -1.99
PTCD3-213ENST00000480102 OBSCN-AS1Q96MR7 158 aa2.62□□□□□ -1.99
PTCD3-213ENST00000480102 Q96NJ1 140 aa2.62□□□□□ -1.99
PTCD3-213ENST00000480102 C20orf166-AS1Q96NR2 134 aa2.62□□□□□ -1.99
PTCD3-213ENST00000480102 LINC00472Q9H8W2 130 aa2.62□□□□□ -1.99
PTCD3-213ENST00000480102 LOC105371267A0A1B0GV96 52 aa2.61□□□□□ -1.99
PTCD3-213ENST00000480102 A8MUU9 505 aa2.61□□□□□ -1.99
PTCD3-213ENST00000480102 J3KT08 172 aa2.61□□□□□ -1.99
PTCD3-213ENST00000480102 SCGB1C2P0DMR2 95 aa2.61□□□□□ -1.99
PTCD3-213ENST00000480102 DSCR8Q96T75 97 aa2.61□□□□□ -1.99
PTCD3-213ENST00000480102 C9JAW5 83 aa2.6□□□□□ -1.99
PTCD3-213ENST00000480102 H3BT86 120 aa2.6□□□□□ -1.99
PTCD3-213ENST00000480102 CCKP06307 115 aa2.6□□□□□ -1.99
PTCD3-213ENST00000480102 BAALC-AS2P0C853 105 aa2.6□□□□□ -1.99
PTCD3-213ENST00000480102 A0A0G2JQZ4 141 aa2.59□□□□□ -1.99
PTCD3-213ENST00000480102 C8orf87E5RJ46 101 aa2.59□□□□□ -1.99
PTCD3-213ENST00000480102 KRTAP19-2Q3LHN2 52 aa2.59□□□□□ -1.99
PTCD3-213ENST00000480102 Q6ZQT0 140 aa2.59□□□□□ -1.99
PTCD3-213ENST00000480102 KRTAP16-1A8MUX0 517 aa2.58□□□□□ -2
PTCD3-213ENST00000480102 KRTAP9-6A8MVA2 160 aa2.58□□□□□ -2
PTCD3-213ENST00000480102 PCOTHQ58A44 107 aa2.58□□□□□ -2
PTCD3-213ENST00000480102 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
PTCD3-213ENST00000480102 ATP11AUNQ6ZP68 121 aa2.58□□□□□ -2
PTCD3-213ENST00000480102 KRTAP4-1Q9BYQ7 146 aa2.58□□□□□ -2
PTCD3-213ENST00000480102 A0A1W2PPM0 123 aa2.57□□□□□ -2
PTCD3-213ENST00000480102 C9orf92A6NGG3 77 aa2.57□□□□□ -2
PTCD3-213ENST00000480102 LINC00313P59037 77 aa2.57□□□□□ -2
PTCD3-213ENST00000480102 CXCL6P80162 114 aa2.57□□□□□ -2
PTCD3-213ENST00000480102 TAX1BP3O14907 124 aa2.56□□□□□ -2
PTCD3-213ENST00000480102 A8MWP4 228 aa2.55□□□□□ -2
PTCD3-213ENST00000480102 NDUFB1O75438 58 aa2.55□□□□□ -2
PTCD3-213ENST00000480102 IGKV4-1P06312 121 aa2.55□□□□□ -2
PTCD3-213ENST00000480102 COL5A1-AS1Q5SY13 56 aa2.55□□□□□ -2
PTCD3-213ENST00000480102 FAM240AA0A1B0GVK7 77 aa2.54□□□□□ -2
PTCD3-213ENST00000480102 A0A1B0GVX0 72 aa2.54□□□□□ -2
PTCD3-213ENST00000480102 MT1HP80294 61 aa2.53□□□□□ -2
PTCD3-213ENST00000480102 PRR15Q8IV56 129 aa2.53□□□□□ -2
PTCD3-213ENST00000480102 SIGMAR1Q99720 223 aa2.53□□□□□ -2
PTCD3-213ENST00000480102 FLGP20930 4061 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-213ENST00000480102 F8W1H4 67 aa2.51□□□□□ -2.01
PTCD3-213ENST00000480102 NREPQ16612 68 aa2.51□□□□□ -2.01
PTCD3-213ENST00000480102 C14orf132Q9NPU4 83 aa2.51□□□□□ -2.01
PTCD3-213ENST00000480102 PRO0461Q9UI25 63 aa2.51□□□□□ -2.01
PTCD3-213ENST00000480102 SPCS1Q9Y6A9 102 aa2.51□□□□□ -2.01
PTCD3-213ENST00000480102 SMIM26A0A096LP01 95 aa2.5□□□□□ -2.01
PTCD3-213ENST00000480102 IGKV3D-7A0A0C4DH55 119 aa2.5□□□□□ -2.01
PTCD3-213ENST00000480102 K7EP34 96 aa2.5□□□□□ -2.01
PTCD3-213ENST00000480102 DSCR10P59022 87 aa2.5□□□□□ -2.01
PTCD3-213ENST00000480102 BATFQ16520 125 aa2.5□□□□□ -2.01
PTCD3-213ENST00000480102 GTF2H5Q6ZYL4 71 aa2.5□□□□□ -2.01
PTCD3-213ENST00000480102 VPS25Q9BRG1 176 aa2.5□□□□□ -2.01
PTCD3-213ENST00000480102 C8orf17Q9NRJ1 99 aa2.5□□□□□ -2.01
PTCD3-213ENST00000480102 IGHV6-1A0A0B4J1U7 121 aa2.49□□□□□ -2.01
PTCD3-213ENST00000480102 TMEM254Q8TBM7 123 aa2.49□□□□□ -2.01
PTCD3-213ENST00000480102 ZCCHC13Q8WW36 166 aaKnown RBP2.49□□□□□ -2.01
PTCD3-213ENST00000480102 NAA38Q9BRA0 125 aaKnown RBP2.49□□□□□ -2.01
PTCD3-213ENST00000480102 WFDC13Q8IUB5 93 aa2.48□□□□□ -2.01
PTCD3-213ENST00000480102 MMP24-AS1A0A0U1RRL7 71 aa2.47□□□□□ -2.01
PTCD3-213ENST00000480102 BPY2O14599 106 aa2.47□□□□□ -2.01
PTCD3-213ENST00000480102 HRES1P13985 223 aa2.47□□□□□ -2.01
PTCD3-213ENST00000480102 DEFB116Q30KQ4 102 aa2.47□□□□□ -2.01
PTCD3-213ENST00000480102 COX6B2Q6YFQ2 88 aa2.47□□□□□ -2.01
PTCD3-213ENST00000480102 MRPL34Q9BQ48 92 aaKnown RBP2.47□□□□□ -2.01
PTCD3-213ENST00000480102 UBL5Q9BZL1 73 aa2.47□□□□□ -2.01
PTCD3-213ENST00000480102 RBM12B-AS1Q9P1G2 102 aa2.47□□□□□ -2.01
PTCD3-213ENST00000480102 A0A1B0GV72 72 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms