RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 TRAV22A0A0B4J277 110 aa3.58□□□□□ -1.84
CPS1-207ENST00000479988 C1orf64Q8NEQ6 169 aa3.58□□□□□ -1.84
CPS1-207ENST00000479988 FBN1P35555 2871 aaKnown RBP3.58□□□□□ -1.84
CPS1-207ENST00000479988 MRPL34Q9BQ48 92 aaKnown RBP3.57□□□□□ -1.84
CPS1-207ENST00000479988 A0A1B0GVX0 72 aa3.57□□□□□ -1.84
CPS1-207ENST00000479988 C8orf17Q9NRJ1 99 aa3.56□□□□□ -1.84
CPS1-207ENST00000479988 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
CPS1-207ENST00000479988 LINC00483Q53H64 154 aa3.56□□□□□ -1.84
CPS1-207ENST00000479988 LINC00472Q9H8W2 130 aa3.56□□□□□ -1.84
CPS1-207ENST00000479988 NBPF19A0A087WUL8 3843 aa3.55□□□□□ -1.84
CPS1-207ENST00000479988 NOTCH2NLQ7Z3S9 236 aa3.55□□□□□ -1.84
CPS1-207ENST00000479988 A0A0G2JQZ4 141 aa3.55□□□□□ -1.84
CPS1-207ENST00000479988 PCOTHQ58A44 107 aa3.55□□□□□ -1.84
CPS1-207ENST00000479988 SPANXA2-OT1Q8N9U9 137 aa3.55□□□□□ -1.84
CPS1-207ENST00000479988 LOC101927531A0A1B0GV80 90 aa3.53□□□□□ -1.84
CPS1-207ENST00000479988 KRTAP13-1Q8IUC0 172 aa3.53□□□□□ -1.84
CPS1-207ENST00000479988 CSMD2Q7Z408 3487 aa3.53□□□□□ -1.84
CPS1-207ENST00000479988 CYP4F30PQ9H0H9 118 aa3.52□□□□□ -1.85
CPS1-207ENST00000479988 PRR15LQ9BU68 103 aa3.52□□□□□ -1.85
CPS1-207ENST00000479988 CYSTM1Q9H1C7 97 aa3.52□□□□□ -1.85
CPS1-207ENST00000479988 A0A1B0GVY2 172 aa3.51□□□□□ -1.85
CPS1-207ENST00000479988 MMP24-AS1A0A0U1RRL7 71 aa3.5□□□□□ -1.85
CPS1-207ENST00000479988 A0A087X002 238 aa3.5□□□□□ -1.85
CPS1-207ENST00000479988 KRTAP29-1A8MX34 341 aaPredicted RBP3.5□□□□□ -1.85
CPS1-207ENST00000479988 KRTAP11-1Q8IUC1 163 aa3.5□□□□□ -1.85
CPS1-207ENST00000479988 ADM2Q7Z4H4 148 aa3.49□□□□□ -1.85
CPS1-207ENST00000479988 RPS29P62273 56 aaKnown RBP3.48□□□□□ -1.85
CPS1-207ENST00000479988 VPS13CQ709C8 3753 aa3.48□□□□□ -1.85
CPS1-207ENST00000479988 ZCCHC13Q8WW36 166 aaKnown RBP3.48□□□□□ -1.85
CPS1-207ENST00000479988 ACYP2P14621 99 aa3.47□□□□□ -1.85
CPS1-207ENST00000479988 ASB16-AS1Q495Z4 193 aa3.47□□□□□ -1.85
CPS1-207ENST00000479988 A6NN06 94 aa3.46□□□□□ -1.85
CPS1-207ENST00000479988 ZNF469Q96JG9 3925 aaPredicted RBP3.46□□□□□ -1.86
CPS1-207ENST00000479988 Q1T7F1 81 aa3.46□□□□□ -1.86
CPS1-207ENST00000479988 KRTAP23-1A1A580 65 aa3.45□□□□□ -1.86
CPS1-207ENST00000479988 COA5Q86WW8 74 aa3.44□□□□□ -1.86
CPS1-207ENST00000479988 AKAP9Q99996 3911 aa3.44□□□□□ -1.86
CPS1-207ENST00000479988 SRRM2Q9UQ35 2752 aaKnown RBP3.43□□□□□ -1.86
CPS1-207ENST00000479988 CAMK2N1Q7Z7J9 78 aa3.42□□□□□ -1.86
CPS1-207ENST00000479988 TRRAPQ9Y4A5 3859 aa3.42□□□□□ -1.86
CPS1-207ENST00000479988 CSAG1Q6PB30 78 aa3.41□□□□□ -1.86
CPS1-207ENST00000479988 SPINK7P58062 85 aa3.4□□□□□ -1.86
CPS1-207ENST00000479988 KRTAP13-2Q52LG2 175 aa3.4□□□□□ -1.87
CPS1-207ENST00000479988 KRTAP3-3Q9BYR6 98 aa3.4□□□□□ -1.87
CPS1-207ENST00000479988 KRTAP3-2Q9BYR7 98 aa3.4□□□□□ -1.87
CPS1-207ENST00000479988 CDC42SE1Q9NRR8 79 aa3.39□□□□□ -1.87
CPS1-207ENST00000479988 Q8N9P0 234 aaPredicted RBP3.36□□□□□ -1.87
CPS1-207ENST00000479988 TPRXLQ17RH7 258 aa3.36□□□□□ -1.87
CPS1-207ENST00000479988 MIR22HGQ0VDD5 57 aa3.36□□□□□ -1.87
CPS1-207ENST00000479988 A0A1B0GU69 56 aa3.35□□□□□ -1.87
CPS1-207ENST00000479988 RPL37P61927 97 aaKnown RBP3.35□□□□□ -1.87
CPS1-207ENST00000479988 Q5W150 140 aa3.35□□□□□ -1.87
CPS1-207ENST00000479988 LINC01558Q9Y6Z2 57 aa3.35□□□□□ -1.87
CPS1-207ENST00000479988 HRES1P13985 223 aa3.35□□□□□ -1.87
CPS1-207ENST00000479988 KRTAP1-4P0C5Y4 121 aa3.34□□□□□ -1.87
CPS1-207ENST00000479988 ROMO1P60602 79 aa3.34□□□□□ -1.87
CPS1-207ENST00000479988 S4R3F8 94 aa3.34□□□□□ -1.87
CPS1-207ENST00000479988 COL7A1Q02388 2944 aa3.34□□□□□ -1.87
CPS1-207ENST00000479988 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
CPS1-207ENST00000479988 DMAC1Q96GE9 116 aa3.32□□□□□ -1.88
CPS1-207ENST00000479988 HUWE1Q7Z6Z7 4374 aaKnown RBP3.31□□□□□ -1.88
CPS1-207ENST00000479988 CUBNO60494 3623 aa3.31□□□□□ -1.88
CPS1-207ENST00000479988 Q5VV11 94 aa3.31□□□□□ -1.88
CPS1-207ENST00000479988 C20orf166-AS1Q96NR2 134 aa3.3□□□□□ -1.88
CPS1-207ENST00000479988 UQCR11O14957 56 aa3.3□□□□□ -1.88
CPS1-207ENST00000479988 MEGF8Q7Z7M0 2845 aa3.29□□□□□ -1.88
CPS1-207ENST00000479988 XP32Q5T750 250 aa3.27□□□□□ -1.89
CPS1-207ENST00000479988 R4GN34 69 aa3.27□□□□□ -1.89
CPS1-207ENST00000479988 A8MU10 97 aa3.27□□□□□ -1.89
CPS1-207ENST00000479988 H1FX-AS1Q4G0G2 97 aa3.26□□□□□ -1.89
CPS1-207ENST00000479988 DNAH9Q9NYC9 4486 aa3.25□□□□□ -1.89
CPS1-207ENST00000479988 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
CPS1-207ENST00000479988 A8MUU9 505 aa3.24□□□□□ -1.89
CPS1-207ENST00000479988 KRTAP13-3Q3SY46 172 aa3.23□□□□□ -1.89
CPS1-207ENST00000479988 SPINT4Q6UDR6 99 aa3.23□□□□□ -1.89
CPS1-207ENST00000479988 PLAC4Q8WY50 150 aa3.23□□□□□ -1.89
CPS1-207ENST00000479988 DNAH3Q8TD57 4116 aa3.22□□□□□ -1.89
CPS1-207ENST00000479988 DNHD1Q96M86 4753 aa3.21□□□□□ -1.9
CPS1-207ENST00000479988 KRTAP4-5Q9BYR2 181 aa3.2□□□□□ -1.9
CPS1-207ENST00000479988 A0A0D9SG42 100 aa3.19□□□□□ -1.9
CPS1-207ENST00000479988 M0QZ58 72 aa3.18□□□□□ -1.9
CPS1-207ENST00000479988 VPS13DQ5THJ4 4388 aa3.17□□□□□ -1.9
CPS1-207ENST00000479988 A0A1B0GU33 70 aa3.16□□□□□ -1.9
CPS1-207ENST00000479988 SPATA8Q6RVD6 105 aa3.16□□□□□ -1.9
CPS1-207ENST00000479988 ANK2Q01484 3957 aa3.16□□□□□ -1.9
CPS1-207ENST00000479988 KRTAP10-10P60014 251 aa3.16□□□□□ -1.9
CPS1-207ENST00000479988 MT1HL1P0DM35 61 aa3.15□□□□□ -1.9
CPS1-207ENST00000479988 PLECQ15149 4684 aaKnown RBP3.14□□□□□ -1.91
CPS1-207ENST00000479988 CMYA5Q8N3K9 4069 aa3.14□□□□□ -1.91
CPS1-207ENST00000479988 KRTAP25-1Q3LHN0 102 aa3.13□□□□□ -1.91
CPS1-207ENST00000479988 DNAH1Q9P2D7 4330 aa3.12□□□□□ -1.91
CPS1-207ENST00000479988 P0C880 135 aa3.12□□□□□ -1.91
CPS1-207ENST00000479988 DYNC2H1Q8NCM8 4307 aaKnown RBP3.12□□□□□ -1.91
CPS1-207ENST00000479988 DNAH17Q9UFH2 4485 aa3.11□□□□□ -1.91
CPS1-207ENST00000479988 ALMS1Q8TCU4 4167 aa3.1□□□□□ -1.91
CPS1-207ENST00000479988 LCE2DQ5TA82 110 aaPredicted RBP3.09□□□□□ -1.91
CPS1-207ENST00000479988 CRIPTQ9P021 101 aa3.08□□□□□ -1.92
CPS1-207ENST00000479988 KRTAP10-4P60372 401 aaPredicted RBP3.08□□□□□ -1.92
CPS1-207ENST00000479988 DNAH10Q8IVF4 4471 aa3.07□□□□□ -1.92
CPS1-207ENST00000479988 STARD9Q9P2P6 4700 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms