RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 Q5W150 140 aa12.34□□□□□ -0.43
COL13A1-208ENST00000479733 WWC2-AS2Q96NR7 200 aa12.33□□□□□ -0.44
COL13A1-208ENST00000479733 C7orf65Q6ZTY9 151 aa12.3□□□□□ -0.44
COL13A1-208ENST00000479733 FRAS1Q86XX4 4008 aa12.29□□□□□ -0.44
COL13A1-208ENST00000479733 LINC00483Q53H64 154 aa12.29□□□□□ -0.44
COL13A1-208ENST00000479733 SPACA4Q8TDM5 124 aa12.29□□□□□ -0.44
COL13A1-208ENST00000479733 NBDYA0A0U1RRE5 68 aa12.28□□□□□ -0.44
COL13A1-208ENST00000479733 MDFIQ99750 246 aa12.28□□□□□ -0.44
COL13A1-208ENST00000479733 PSORS1C2Q9UIG4 136 aa12.28□□□□□ -0.44
COL13A1-208ENST00000479733 RETNLBQ9BQ08 111 aa12.24□□□□□ -0.45
COL13A1-208ENST00000479733 ZNF706Q9Y5V0 76 aaPredicted RBP12.24□□□□□ -0.45
COL13A1-208ENST00000479733 PLECQ15149 4684 aaKnown RBP12.23□□□□□ -0.45
COL13A1-208ENST00000479733 Q6ZRN7 208 aaPredicted RBP12.22□□□□□ -0.45
COL13A1-208ENST00000479733 CIRBP-AS1Q8TBR5 109 aa12.21□□□□□ -0.45
COL13A1-208ENST00000479733 IGLV5-52A0A0A0MRZ9 124 aa12.18□□□□□ -0.46
COL13A1-208ENST00000479733 ACYP2P14621 99 aa12.17□□□□□ -0.46
COL13A1-208ENST00000479733 DNAH8Q96JB1 4490 aa12.17□□□□□ -0.46
COL13A1-208ENST00000479733 ZNF861PO60384 105 aa12.16□□□□□ -0.46
COL13A1-208ENST00000479733 PRAC1Q96KF2 57 aa12.16□□□□□ -0.46
COL13A1-208ENST00000479733 KRTAP13-3Q3SY46 172 aa12.14□□□□□ -0.47
COL13A1-208ENST00000479733 LINC00313P59037 77 aa12.12□□□□□ -0.47
COL13A1-208ENST00000479733 A0A087WTM6 91 aa12.1□□□□□ -0.47
COL13A1-208ENST00000479733 ADM2Q7Z4H4 148 aa12.1□□□□□ -0.47
COL13A1-208ENST00000479733 RTL8CO15255 209 aa12.1□□□□□ -0.47
COL13A1-208ENST00000479733 A0A1B0GU69 56 aa12.06□□□□□ -0.48
COL13A1-208ENST00000479733 TGP01266 2768 aa12.05□□□□□ -0.48
COL13A1-208ENST00000479733 HECTD4Q9Y4D8 3996 aa12.04□□□□□ -0.48
COL13A1-208ENST00000479733 DMAC1Q96GE9 116 aa12.03□□□□□ -0.48
COL13A1-208ENST00000479733 ALMS1Q8TCU4 4167 aa12□□□□□ -0.49
COL13A1-208ENST00000479733 C4orf48Q5BLP8 95 aa11.98□□□□□ -0.49
COL13A1-208ENST00000479733 DYNC2H1Q8NCM8 4307 aaKnown RBP11.98□□□□□ -0.49
COL13A1-208ENST00000479733 MEGF8Q7Z7M0 2845 aa11.97□□□□□ -0.49
COL13A1-208ENST00000479733 IGLV7-43P04211 117 aa11.97□□□□□ -0.49
COL13A1-208ENST00000479733 DNAH17Q9UFH2 4485 aa11.96□□□□□ -0.49
COL13A1-208ENST00000479733 FBN3Q75N90 2809 aa11.95□□□□□ -0.5
COL13A1-208ENST00000479733 STARD9Q9P2P6 4700 aa11.95□□□□□ -0.5
COL13A1-208ENST00000479733 NUPR2A6NF83 97 aa11.95□□□□□ -0.5
COL13A1-208ENST00000479733 C8orf87E5RJ46 101 aa11.94□□□□□ -0.5
COL13A1-208ENST00000479733 KMT2AQ03164 3969 aa11.94□□□□□ -0.5
COL13A1-208ENST00000479733 FAM229AH3BQW9 127 aa11.93□□□□□ -0.5
COL13A1-208ENST00000479733 IGKV2D-30A0A075B6S6 120 aa11.9□□□□□ -0.5
COL13A1-208ENST00000479733 IGKV2-30P06310 120 aa11.9□□□□□ -0.5
COL13A1-208ENST00000479733 MIR22HGQ0VDD5 57 aa11.9□□□□□ -0.51
COL13A1-208ENST00000479733 SPATA8Q6RVD6 105 aa11.87□□□□□ -0.51
COL13A1-208ENST00000479733 DNAH2Q9P225 4427 aa11.86□□□□□ -0.51
COL13A1-208ENST00000479733 PLA2G1BP04054 148 aaKnown RBP11.86□□□□□ -0.51
COL13A1-208ENST00000479733 SSBP3-AS1Q7Z2R9 100 aa11.85□□□□□ -0.51
COL13A1-208ENST00000479733 DNHD1Q96M86 4753 aa11.85□□□□□ -0.51
COL13A1-208ENST00000479733 UQCR11O14957 56 aa11.85□□□□□ -0.51
COL13A1-208ENST00000479733 VPS13DQ5THJ4 4388 aa11.84□□□□□ -0.51
COL13A1-208ENST00000479733 PRKDCP78527 4128 aaKnown RBP11.83□□□□□ -0.52
COL13A1-208ENST00000479733 SPINK1P00995 79 aa11.8□□□□□ -0.52
COL13A1-208ENST00000479733 KRTAP13-2Q52LG2 175 aa11.76□□□□□ -0.53
COL13A1-208ENST00000479733 DNAH6Q9C0G6 4158 aa11.75□□□□□ -0.53
COL13A1-208ENST00000479733 LINC01554Q52M75 96 aa11.75□□□□□ -0.53
COL13A1-208ENST00000479733 KRTAP16-1A8MUX0 517 aa11.73□□□□□ -0.53
COL13A1-208ENST00000479733 C1orf134Q5TEV5 83 aa11.71□□□□□ -0.53
COL13A1-208ENST00000479733 DNAH11Q96DT5 4516 aa11.68□□□□□ -0.54
COL13A1-208ENST00000479733 CSAG1Q6PB30 78 aa11.68□□□□□ -0.54
COL13A1-208ENST00000479733 Q8N1X5 172 aa11.68□□□□□ -0.54
COL13A1-208ENST00000479733 H3BS24 57 aa11.66□□□□□ -0.54
COL13A1-208ENST00000479733 KRTAP10-2P60368 255 aa11.63□□□□□ -0.55
COL13A1-208ENST00000479733 LY6G6CO95867 125 aa11.61□□□□□ -0.55
COL13A1-208ENST00000479733 LRP1BQ9NZR2 4599 aa11.58□□□□□ -0.56
COL13A1-208ENST00000479733 DNAH5Q8TE73 4624 aa11.54□□□□□ -0.56
COL13A1-208ENST00000479733 KRTAP1-4P0C5Y4 121 aa11.49□□□□□ -0.57
COL13A1-208ENST00000479733 KRTAP10-1P60331 282 aa11.46□□□□□ -0.57
COL13A1-208ENST00000479733 TYMSOSQ8TAI1 123 aa11.44□□□□□ -0.58
COL13A1-208ENST00000479733 Q6ZSA8 131 aa11.42□□□□□ -0.58
COL13A1-208ENST00000479733 FLG2Q5D862 2391 aaPredicted RBP11.41□□□□□ -0.58
COL13A1-208ENST00000479733 H0YAA0 97 aa11.4□□□□□ -0.58
COL13A1-208ENST00000479733 VPS13BQ7Z7G8 4022 aa11.4□□□□□ -0.58
COL13A1-208ENST00000479733 C9orf92A6NGG3 77 aa11.31□□□□□ -0.6
COL13A1-208ENST00000479733 A8MUU9 505 aa11.3□□□□□ -0.6
COL13A1-208ENST00000479733 A0A1B0GU33 70 aa11.29□□□□□ -0.6
COL13A1-208ENST00000479733 LINC00304Q8N9R0 145 aa11.29□□□□□ -0.6
COL13A1-208ENST00000479733 FAT2Q9NYQ8 4349 aa11.26□□□□□ -0.61
COL13A1-208ENST00000479733 CRIPTQ9P021 101 aa11.25□□□□□ -0.61
COL13A1-208ENST00000479733 PKD1P98161 4303 aa11.23□□□□□ -0.61
COL13A1-208ENST00000479733 KRTAP3-1Q9BYR8 98 aa11.22□□□□□ -0.61
COL13A1-208ENST00000479733 HYDINQ4G0P3 5121 aa11.2□□□□□ -0.62
COL13A1-208ENST00000479733 KRTAP25-1Q3LHN0 102 aa11.2□□□□□ -0.62
COL13A1-208ENST00000479733 H1FX-AS1Q4G0G2 97 aa11.18□□□□□ -0.62
COL13A1-208ENST00000479733 KRTAP21-3Q3LHN1 58 aa11.12□□□□□ -0.63
COL13A1-208ENST00000479733 SMR3BP02814 79 aaPredicted RBP11.08□□□□□ -0.64
COL13A1-208ENST00000479733 C20orf166-AS1Q96NR2 134 aa11.04□□□□□ -0.64
COL13A1-208ENST00000479733 ROMO1P60602 79 aa11.03□□□□□ -0.64
COL13A1-208ENST00000479733 PKHD1P08F94 4074 aa11.03□□□□□ -0.64
COL13A1-208ENST00000479733 DMBT1Q9UGM3 2413 aaPredicted RBP11.03□□□□□ -0.64
COL13A1-208ENST00000479733 COX6B2Q6YFQ2 88 aa11.02□□□□□ -0.65
COL13A1-208ENST00000479733 K7ERS5 55 aa11□□□□□ -0.65
COL13A1-208ENST00000479733 RPS29P62273 56 aaKnown RBP10.96□□□□□ -0.65
COL13A1-208ENST00000479733 FAT1Q14517 4588 aa10.91□□□□□ -0.66
COL13A1-208ENST00000479733 A0A0D9SG42 100 aa10.88□□□□□ -0.67
COL13A1-208ENST00000479733 SACSQ9NZJ4 4579 aa10.87□□□□□ -0.67
COL13A1-208ENST00000479733 KRTAP13-4Q3LI77 160 aa10.78□□□□□ -0.68
COL13A1-208ENST00000479733 P0C880 135 aa10.76□□□□□ -0.69
COL13A1-208ENST00000479733 RPL37P61927 97 aaKnown RBP10.76□□□□□ -0.69
COL13A1-208ENST00000479733 DYNC1H1Q14204 4646 aaKnown RBP10.75□□□□□ -0.69
COL13A1-208ENST00000479733 KRTAP10-6P60371 365 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms