RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 UPK3BQ9BT76 320 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 DAZ1Q9NQZ3 744 aaKnown RBP2.36□□□□□ -2.03
CCDC171-207ENST00000478913 KLK9Q9UKQ9 250 aa2.36□□□□□ -2.03
CCDC171-207ENST00000478913 FLGP20930 4061 aaPredicted RBP2.35□□□□□ -2.03
CCDC171-207ENST00000478913 JMJD7-PLA2G4BH0Y9G9 81 aa2.35□□□□□ -2.03
CCDC171-207ENST00000478913 M0QY20 66 aa2.35□□□□□ -2.03
CCDC171-207ENST00000478913 UBE2L6O14933 153 aa2.35□□□□□ -2.03
CCDC171-207ENST00000478913 BCE1O60756 84 aa2.35□□□□□ -2.03
CCDC171-207ENST00000478913 IGLV7-43P04211 117 aa2.35□□□□□ -2.03
CCDC171-207ENST00000478913 TSPEAR-AS2P59090 65 aa2.35□□□□□ -2.03
CCDC171-207ENST00000478913 Q6JHZ5 121 aa2.35□□□□□ -2.03
CCDC171-207ENST00000478913 CLEC2BQ92478 149 aa2.35□□□□□ -2.03
CCDC171-207ENST00000478913 RHPN1-AS1Q9BWJ2 59 aa2.35□□□□□ -2.03
CCDC171-207ENST00000478913 UBL5Q9BZL1 73 aa2.35□□□□□ -2.03
CCDC171-207ENST00000478913 NDUFC1O43677 76 aa2.34□□□□□ -2.03
CCDC171-207ENST00000478913 RNASE3P12724 160 aaKnown RBP2.34□□□□□ -2.03
CCDC171-207ENST00000478913 ATP5EP56381 51 aaPredicted RBP2.34□□□□□ -2.03
CCDC171-207ENST00000478913 DAD1P61803 113 aa2.34□□□□□ -2.03
CCDC171-207ENST00000478913 HIST1H4AP62805 103 aaKnown RBP2.34□□□□□ -2.03
CCDC171-207ENST00000478913 SS18Q15532 418 aa2.34□□□□□ -2.03
CCDC171-207ENST00000478913 SDIM1Q6ZPB5 146 aa2.34□□□□□ -2.03
CCDC171-207ENST00000478913 DAZ4Q86SG3 579 aaKnown RBP2.34□□□□□ -2.03
CCDC171-207ENST00000478913 C5orf38Q86SI9 138 aa2.34□□□□□ -2.03
CCDC171-207ENST00000478913 LINC00308Q8TCZ7 52 aa2.34□□□□□ -2.03
CCDC171-207ENST00000478913 DCANP1Q8TF63 244 aa2.34□□□□□ -2.03
CCDC171-207ENST00000478913 FAM19A4Q96LR4 140 aa2.34□□□□□ -2.03
CCDC171-207ENST00000478913 AMELXQ99217 191 aa2.34□□□□□ -2.03
CCDC171-207ENST00000478913 ORMDL1Q9P0S3 153 aa2.34□□□□□ -2.03
CCDC171-207ENST00000478913 IGKV3-7A0A075B6H7 116 aa2.33□□□□□ -2.04
CCDC171-207ENST00000478913 KNCNA6PVL3 124 aa2.33□□□□□ -2.04
CCDC171-207ENST00000478913 ASB16-AS1Q495Z4 193 aa2.33□□□□□ -2.04
CCDC171-207ENST00000478913 SERP1Q9Y6X1 66 aa2.33□□□□□ -2.04
CCDC171-207ENST00000478913 TRBV10-3A0A0K0K1G6 114 aa2.32□□□□□ -2.04
CCDC171-207ENST00000478913 TMEM256-PLSCR3K7ERE1 68 aa2.32□□□□□ -2.04
CCDC171-207ENST00000478913 LECT2O14960 151 aa2.32□□□□□ -2.04
CCDC171-207ENST00000478913 P0C880 135 aa2.32□□□□□ -2.04
CCDC171-207ENST00000478913 HTN1P15515 57 aa2.32□□□□□ -2.04
CCDC171-207ENST00000478913 PDE6GP18545 87 aa2.32□□□□□ -2.04
CCDC171-207ENST00000478913 RPL28P46779 137 aaKnown RBP2.32□□□□□ -2.04
CCDC171-207ENST00000478913 LINC00158P58513 81 aa2.32□□□□□ -2.04
CCDC171-207ENST00000478913 DPH3Q96FX2 82 aa2.32□□□□□ -2.04
CCDC171-207ENST00000478913 PSORS1C2Q9UIG4 136 aa2.32□□□□□ -2.04
CCDC171-207ENST00000478913 TRAV12-2A0A075B6T6 113 aa2.31□□□□□ -2.04
CCDC171-207ENST00000478913 IGKV3D-7A0A0C4DH55 119 aa2.31□□□□□ -2.04
CCDC171-207ENST00000478913 TRBV10-1A0A0K0K1A3 114 aa2.31□□□□□ -2.04
CCDC171-207ENST00000478913 IGLV6-57P01721 117 aa2.31□□□□□ -2.04
CCDC171-207ENST00000478913 CCKP06307 115 aa2.31□□□□□ -2.04
CCDC171-207ENST00000478913 SPINK6Q6UWN8 80 aa2.31□□□□□ -2.04
CCDC171-207ENST00000478913 COX7B2Q8TF08 81 aa2.31□□□□□ -2.04
CCDC171-207ENST00000478913 SND1-IT1Q9HBX3 110 aa2.31□□□□□ -2.04
CCDC171-207ENST00000478913 UBE2D4Q9Y2X8 147 aa2.31□□□□□ -2.04
CCDC171-207ENST00000478913 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.3□□□□□ -2.04
CCDC171-207ENST00000478913 TRAV7A0A075B6U4 112 aa2.3□□□□□ -2.04
CCDC171-207ENST00000478913 IGHV3-73A0A0B4J1V6 119 aa2.3□□□□□ -2.04
CCDC171-207ENST00000478913 LOC107984640A0A0U1RRK4 108 aa2.3□□□□□ -2.04
CCDC171-207ENST00000478913 A0A1W2PNN7 141 aa2.3□□□□□ -2.04
CCDC171-207ENST00000478913 IGKV2-29A2NJV5 120 aaPredicted RBP2.3□□□□□ -2.04
CCDC171-207ENST00000478913 IBA57-AS1B1ANH7 110 aa2.3□□□□□ -2.04
CCDC171-207ENST00000478913 C8orf87E5RJ46 101 aa2.3□□□□□ -2.04
CCDC171-207ENST00000478913 IGHV3-53P01767 116 aa2.3□□□□□ -2.04
CCDC171-207ENST00000478913 SPINK13Q1W4C9 94 aa2.3□□□□□ -2.04
CCDC171-207ENST00000478913 HRCT1Q6UXD1 115 aa2.3□□□□□ -2.04
CCDC171-207ENST00000478913 ADM2Q7Z4H4 148 aa2.3□□□□□ -2.04
CCDC171-207ENST00000478913 KRTAP13-1Q8IUC0 172 aa2.3□□□□□ -2.04
CCDC171-207ENST00000478913 ZNF625Q96I27 306 aaPredicted RBP2.3□□□□□ -2.04
CCDC171-207ENST00000478913 LINC00467Q9BRT7 94 aa2.3□□□□□ -2.04
CCDC171-207ENST00000478913 C14orf132Q9NPU4 83 aa2.3□□□□□ -2.04
CCDC171-207ENST00000478913 CDKN2A-AS1Q9UH64 79 aa2.3□□□□□ -2.04
CCDC171-207ENST00000478913 IGHV6-1A0A0B4J1U7 121 aa2.29□□□□□ -2.04
CCDC171-207ENST00000478913 NDUFS5O43920 106 aa2.29□□□□□ -2.04
CCDC171-207ENST00000478913 RBM3P98179 157 aaKnown RBP2.29□□□□□ -2.04
CCDC171-207ENST00000478913 Q5XG85 94 aa2.29□□□□□ -2.04
CCDC171-207ENST00000478913 FAM19A3Q7Z5A8 133 aa2.29□□□□□ -2.04
CCDC171-207ENST00000478913 DSCR8Q96T75 97 aa2.29□□□□□ -2.04
CCDC171-207ENST00000478913 TOMM7Q9P0U1 55 aa2.29□□□□□ -2.04
CCDC171-207ENST00000478913 TRAV23DV6A0A075B6W5 121 aa2.28□□□□□ -2.04
CCDC171-207ENST00000478913 TRGV1A0A0A0MS02 117 aa2.28□□□□□ -2.04
CCDC171-207ENST00000478913 XCL1P47992 114 aa2.28□□□□□ -2.04
CCDC171-207ENST00000478913 C20orf197Q8N268 126 aa2.28□□□□□ -2.04
CCDC171-207ENST00000478913 SMIM11BQ8TCY0 68 aa2.28□□□□□ -2.04
CCDC171-207ENST00000478913 SMCR5Q8TEV8 140 aa2.28□□□□□ -2.04
CCDC171-207ENST00000478913 RETNLBQ9BQ08 111 aa2.28□□□□□ -2.04
CCDC171-207ENST00000478913 RBM12B-AS1Q9P1G2 102 aa2.28□□□□□ -2.04
CCDC171-207ENST00000478913 TRGV2A0A075B6R0 118 aa2.27□□□□□ -2.05
CCDC171-207ENST00000478913 TRGV4A0A0C4DH28 118 aa2.27□□□□□ -2.05
CCDC171-207ENST00000478913 DEFB131AP59861 70 aa2.27□□□□□ -2.05
CCDC171-207ENST00000478913 COX17Q14061 63 aa2.27□□□□□ -2.05
CCDC171-207ENST00000478913 TPRXLQ17RH7 258 aa2.27□□□□□ -2.05
CCDC171-207ENST00000478913 ENHOQ6UWT2 76 aa2.27□□□□□ -2.05
CCDC171-207ENST00000478913 PRR15Q8IV56 129 aa2.27□□□□□ -2.05
CCDC171-207ENST00000478913 ZCCHC13Q8WW36 166 aaKnown RBP2.27□□□□□ -2.05
CCDC171-207ENST00000478913 OBSCN-AS1Q96MR7 158 aa2.27□□□□□ -2.05
CCDC171-207ENST00000478913 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
CCDC171-207ENST00000478913 LOC110117498A0A087WWA1 95 aa2.26□□□□□ -2.05
CCDC171-207ENST00000478913 TRBV6-4A0A1B0GX49 114 aa2.26□□□□□ -2.05
CCDC171-207ENST00000478913 NCR3O14931 201 aa2.26□□□□□ -2.05
CCDC171-207ENST00000478913 ERC2-IT1O76042 136 aa2.26□□□□□ -2.05
CCDC171-207ENST00000478913 DEFB130BP0DP73 79 aa2.26□□□□□ -2.05
CCDC171-207ENST00000478913 DEFB130AP0DP74 79 aa2.26□□□□□ -2.05
CCDC171-207ENST00000478913 DEFB1P60022 68 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms