RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 NDUFV3P56181 108 aaKnown RBP8.59□□□□□ -1.03
VIM-204ENST00000478746 A8MUU9 505 aa8.58□□□□□ -1.04
VIM-204ENST00000478746 BAALC-AS2P0C853 105 aa8.58□□□□□ -1.04
VIM-204ENST00000478746 C9JAW5 83 aa8.57□□□□□ -1.04
VIM-204ENST00000478746 H3BMG7 143 aa8.55□□□□□ -1.04
VIM-204ENST00000478746 UBE2V1Q13404 147 aa8.55□□□□□ -1.04
VIM-204ENST00000478746 KRTAP19-6Q3LI70 58 aa8.55□□□□□ -1.04
VIM-204ENST00000478746 K7EP34 96 aa8.53□□□□□ -1.04
VIM-204ENST00000478746 ANKRD29Q8N6D5 301 aa8.53□□□□□ -1.04
VIM-204ENST00000478746 A0A1B0GV72 72 aa8.51□□□□□ -1.05
VIM-204ENST00000478746 KRTAP6-3Q3LI67 103 aa8.51□□□□□ -1.05
VIM-204ENST00000478746 GTF2H5Q6ZYL4 71 aa8.51□□□□□ -1.05
VIM-204ENST00000478746 H3BT86 120 aa8.5□□□□□ -1.05
VIM-204ENST00000478746 MTURNQ8N3F0 131 aa8.5□□□□□ -1.05
VIM-204ENST00000478746 RBM12B-AS1Q9P1G2 102 aa8.5□□□□□ -1.05
VIM-204ENST00000478746 SS18L2Q9UHA2 77 aa8.5□□□□□ -1.05
VIM-204ENST00000478746 KRTAP16-1A8MUX0 517 aa8.47□□□□□ -1.05
VIM-204ENST00000478746 RBM3P98179 157 aaKnown RBP8.47□□□□□ -1.05
VIM-204ENST00000478746 JMJD7-PLA2G4BH0Y9G9 81 aa8.46□□□□□ -1.06
VIM-204ENST00000478746 MPLKIPQ8TAP9 179 aa8.45□□□□□ -1.06
VIM-204ENST00000478746 DSCR8Q96T75 97 aa8.44□□□□□ -1.06
VIM-204ENST00000478746 DSCR10P59022 87 aa8.43□□□□□ -1.06
VIM-204ENST00000478746 HRES1P13985 223 aa8.42□□□□□ -1.06
VIM-204ENST00000478746 TEN1Q86WV5 123 aa8.42□□□□□ -1.06
VIM-204ENST00000478746 TRBV7-4A0A0J9YYF1 115 aa8.41□□□□□ -1.06
VIM-204ENST00000478746 SMCPP49901 116 aaPredicted RBP8.4□□□□□ -1.06
VIM-204ENST00000478746 PRO0461Q9UI25 63 aa8.4□□□□□ -1.06
VIM-204ENST00000478746 A0A087WSZ3 146 aa8.39□□□□□ -1.07
VIM-204ENST00000478746 A0A1B0GV90 55 aa8.39□□□□□ -1.07
VIM-204ENST00000478746 A0A1W2PNM2 257 aa8.39□□□□□ -1.07
VIM-204ENST00000478746 CCKP06307 115 aa8.39□□□□□ -1.07
VIM-204ENST00000478746 VPS25Q9BRG1 176 aa8.39□□□□□ -1.07
VIM-204ENST00000478746 F8W1H4 67 aa8.38□□□□□ -1.07
VIM-204ENST00000478746 PDE6GP18545 87 aa8.38□□□□□ -1.07
VIM-204ENST00000478746 C14orf132Q9NPU4 83 aa8.38□□□□□ -1.07
VIM-204ENST00000478746 LOC110117498A0A087WWA1 95 aa8.37□□□□□ -1.07
VIM-204ENST00000478746 NOTCH2NLQ7Z3S9 236 aa8.36□□□□□ -1.07
VIM-204ENST00000478746 LINC00313P59037 77 aa8.35□□□□□ -1.07
VIM-204ENST00000478746 Q6ZQT0 140 aa8.34□□□□□ -1.07
VIM-204ENST00000478746 SIGMAR1Q99720 223 aa8.34□□□□□ -1.07
VIM-204ENST00000478746 C21orf62-AS1Q17RA5 79 aa8.33□□□□□ -1.08
VIM-204ENST00000478746 NEBP20929 6669 aa8.32□□□□□ -1.08
VIM-204ENST00000478746 ETDBQ3ZM63 59 aa8.29□□□□□ -1.08
VIM-204ENST00000478746 A0A1B0GW54 56 aa8.28□□□□□ -1.08
VIM-204ENST00000478746 A8MWP4 228 aa8.26□□□□□ -1.09
VIM-204ENST00000478746 IGKV4-1P06312 121 aa8.26□□□□□ -1.09
VIM-204ENST00000478746 Q8N9P0 234 aaPredicted RBP8.24□□□□□ -1.09
VIM-204ENST00000478746 MUC12Q9UKN1 5478 aa8.18□□□□□ -1.1
VIM-204ENST00000478746 IGHV6-1A0A0B4J1U7 121 aa8.18□□□□□ -1.1
VIM-204ENST00000478746 NREPQ16612 68 aa8.18□□□□□ -1.1
VIM-204ENST00000478746 DEFB116Q30KQ4 102 aa8.18□□□□□ -1.1
VIM-204ENST00000478746 LINC00472Q9H8W2 130 aa8.18□□□□□ -1.1
VIM-204ENST00000478746 SPINK7P58062 85 aa8.15□□□□□ -1.1
VIM-204ENST00000478746 KRTAP20-1Q3LI63 56 aa8.15□□□□□ -1.1
VIM-204ENST00000478746 J3KT08 172 aa8.14□□□□□ -1.11
VIM-204ENST00000478746 UBL5Q9BZL1 73 aa8.12□□□□□ -1.11
VIM-204ENST00000478746 Q6ZVQ6 151 aa8.11□□□□□ -1.11
VIM-204ENST00000478746 C8orf87E5RJ46 101 aa8.1□□□□□ -1.11
VIM-204ENST00000478746 ZCCHC13Q8WW36 166 aaKnown RBP8.1□□□□□ -1.11
VIM-204ENST00000478746 NDUFB1O75438 58 aa8.08□□□□□ -1.12
VIM-204ENST00000478746 ACYP1P07311 99 aa8.08□□□□□ -1.12
VIM-204ENST00000478746 A0A1B0GVX0 72 aa8.07□□□□□ -1.12
VIM-204ENST00000478746 BPY2O14599 106 aa8.07□□□□□ -1.12
VIM-204ENST00000478746 FAM240AA0A1B0GVK7 77 aa8.06□□□□□ -1.12
VIM-204ENST00000478746 J3QR89 54 aa8.04□□□□□ -1.12
VIM-204ENST00000478746 WFDC13Q8IUB5 93 aa8.04□□□□□ -1.12
VIM-204ENST00000478746 IGKV3D-7A0A0C4DH55 119 aa8.01□□□□□ -1.13
VIM-204ENST00000478746 PRR15Q8IV56 129 aa8□□□□□ -1.13
VIM-204ENST00000478746 A6NN06 94 aa7.99□□□□□ -1.13
VIM-204ENST00000478746 K7EQZ3 153 aa7.98□□□□□ -1.13
VIM-204ENST00000478746 C8orf17Q9NRJ1 99 aa7.97□□□□□ -1.13
VIM-204ENST00000478746 CXCL6P80162 114 aa7.95□□□□□ -1.14
VIM-204ENST00000478746 Q8N9L7 120 aa7.95□□□□□ -1.14
VIM-204ENST00000478746 K7ERU9 68 aa7.93□□□□□ -1.14
VIM-204ENST00000478746 H1FX-AS1Q4G0G2 97 aa7.93□□□□□ -1.14
VIM-204ENST00000478746 ATP5EP2Q5VTU8 51 aa7.92□□□□□ -1.14
VIM-204ENST00000478746 MMP24-AS1A0A0U1RRL7 71 aa7.91□□□□□ -1.14
VIM-204ENST00000478746 LINC00643Q86TS7 51 aa7.91□□□□□ -1.14
VIM-204ENST00000478746 MDN1Q9NU22 5596 aa7.9□□□□□ -1.14
VIM-204ENST00000478746 hDV103S1A0JD37 113 aa7.88□□□□□ -1.15
VIM-204ENST00000478746 TMEM254Q8TBM7 123 aa7.88□□□□□ -1.15
VIM-204ENST00000478746 KRTAP5-9P26371 169 aa7.87□□□□□ -1.15
VIM-204ENST00000478746 KMT2DO14686 5537 aa7.86□□□□□ -1.15
VIM-204ENST00000478746 CASC2Q6XLA1 102 aa7.86□□□□□ -1.15
VIM-204ENST00000478746 MRPL34Q9BQ48 92 aaKnown RBP7.86□□□□□ -1.15
VIM-204ENST00000478746 HCG22E2RYF7 251 aa7.84□□□□□ -1.15
VIM-204ENST00000478746 HIST1H4AP62805 103 aaKnown RBP7.83□□□□□ -1.16
VIM-204ENST00000478746 MT1BP07438 61 aa7.82□□□□□ -1.16
VIM-204ENST00000478746 NDUFS5O43920 106 aa7.81□□□□□ -1.16
VIM-204ENST00000478746 KRTAP2-3P0C7H8 128 aa7.81□□□□□ -1.16
VIM-204ENST00000478746 KRTAP2-4Q9BYR9 128 aa7.81□□□□□ -1.16
VIM-204ENST00000478746 Q5VV11 94 aa7.8□□□□□ -1.16
VIM-204ENST00000478746 KRTAP10-5P60370 271 aa7.77□□□□□ -1.17
VIM-204ENST00000478746 FAM236AA0A1B0GUQ0 79 aa7.74□□□□□ -1.17
VIM-204ENST00000478746 FAM236BA0A1B0GV22 79 aa7.74□□□□□ -1.17
VIM-204ENST00000478746 A0A087WVE0 104 aa7.73□□□□□ -1.17
VIM-204ENST00000478746 KRTAP19-8Q3LI54 63 aa7.72□□□□□ -1.17
VIM-204ENST00000478746 MT-ATP8P03928 68 aa7.69□□□□□ -1.18
VIM-204ENST00000478746 IGKV2D-30A0A075B6S6 120 aa7.68□□□□□ -1.18
VIM-204ENST00000478746 IGKV2-30P06310 120 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms