RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 CCNB3Q8WWL7 1395 aa-1.1□□□□□ -2.59
HPS3-205ENST00000478525 ZFYVE16Q7Z3T8 1539 aa-1.1□□□□□ -2.59
HPS3-205ENST00000478525 KIAA0586Q9BVV6 1533 aa-1.1□□□□□ -2.59
HPS3-205ENST00000478525 ZC3H13Q5T200 1668 aaKnown RBP-1.1□□□□□ -2.59
HPS3-205ENST00000478525 A0A1B0GV90 55 aa-1.11□□□□□ -2.59
HPS3-205ENST00000478525 C20orf202A1L168 122 aa-1.11□□□□□ -2.59
HPS3-205ENST00000478525 MT2AP02795 61 aa-1.11□□□□□ -2.59
HPS3-205ENST00000478525 MT1BP07438 61 aa-1.11□□□□□ -2.59
HPS3-205ENST00000478525 URB2Q14146 1524 aaKnown RBP-1.11□□□□□ -2.59
HPS3-205ENST00000478525 DIP2BQ9P265 1576 aa-1.12□□□□□ -2.59
HPS3-205ENST00000478525 DEFB131BA0A096LNP1 70 aa-1.12□□□□□ -2.59
HPS3-205ENST00000478525 ACYP1P07311 99 aa-1.12□□□□□ -2.59
HPS3-205ENST00000478525 WT1-ASQ06250 92 aa-1.12□□□□□ -2.59
HPS3-205ENST00000478525 UBR1Q8IWV7 1749 aa-1.12□□□□□ -2.59
HPS3-205ENST00000478525 PLCH1Q4KWH8 1693 aa-1.13□□□□□ -2.59
HPS3-205ENST00000478525 TMEM131LA2VDJ0 1609 aa-1.13□□□□□ -2.59
HPS3-205ENST00000478525 GYPAP02724 150 aa-1.13□□□□□ -2.59
HPS3-205ENST00000478525 KIF1AQ12756 1690 aa-1.13□□□□□ -2.59
HPS3-205ENST00000478525 ITSN2Q9NZM3 1697 aa-1.13□□□□□ -2.59
HPS3-205ENST00000478525 PRUNE2Q8WUY3 3088 aa-1.14□□□□□ -2.59
HPS3-205ENST00000478525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.14□□□□□ -2.59
HPS3-205ENST00000478525 NRAPQ86VF7 1730 aa-1.14□□□□□ -2.59
HPS3-205ENST00000478525 MYMXA0A1B0GTQ4 84 aa-1.14□□□□□ -2.59
HPS3-205ENST00000478525 UMAD1C9J7I0 102 aa-1.14□□□□□ -2.59
HPS3-205ENST00000478525 KRTAP19-6Q3LI70 58 aa-1.14□□□□□ -2.59
HPS3-205ENST00000478525 C2orf88Q9BSF0 95 aa-1.14□□□□□ -2.59
HPS3-205ENST00000478525 CDC42BPGQ6DT37 1551 aa-1.14□□□□□ -2.59
HPS3-205ENST00000478525 LINC01546A6NGU7 62 aa-1.15□□□□□ -2.59
HPS3-205ENST00000478525 MT-ATP8P03928 68 aa-1.15□□□□□ -2.59
HPS3-205ENST00000478525 TJP1Q07157 1748 aa-1.15□□□□□ -2.59
HPS3-205ENST00000478525 LRRIQ1Q96JM4 1722 aa-1.15□□□□□ -2.59
HPS3-205ENST00000478525 CEBPZOSA8MTT3 80 aa-1.16□□□□□ -2.6
HPS3-205ENST00000478525 NDUFA4O00483 81 aa-1.16□□□□□ -2.6
HPS3-205ENST00000478525 S100A10P60903 97 aa-1.16□□□□□ -2.6
HPS3-205ENST00000478525 NCMAPQ5T1S8 102 aa-1.16□□□□□ -2.6
HPS3-205ENST00000478525 RABAC1Q9UI14 185 aa-1.16□□□□□ -2.6
HPS3-205ENST00000478525 MGAQ8IWI9 3026 aa-1.16□□□□□ -2.6
HPS3-205ENST00000478525 AKAP12Q02952 1782 aa-1.16□□□□□ -2.6
HPS3-205ENST00000478525 CFAP43Q8NDM7 1665 aa-1.16□□□□□ -2.6
HPS3-205ENST00000478525 NCOA2Q15596 1464 aa-1.17□□□□□ -2.6
HPS3-205ENST00000478525 M0QZ58 72 aa-1.17□□□□□ -2.6
HPS3-205ENST00000478525 SNRPFP62306 86 aaKnown RBP-1.17□□□□□ -2.6
HPS3-205ENST00000478525 A0A1B0GUL6 1792 aa-1.17□□□□□ -2.6
HPS3-205ENST00000478525 NEXMIFQ5QGS0 1516 aa-1.18□□□□□ -2.6
HPS3-205ENST00000478525 LINC00643Q86TS7 51 aa-1.18□□□□□ -2.6
HPS3-205ENST00000478525 TCEAL7Q9BRU2 100 aa-1.18□□□□□ -2.6
HPS3-205ENST00000478525 UBL5Q9BZL1 73 aa-1.18□□□□□ -2.6
HPS3-205ENST00000478525 HFM1A2PYH4 1435 aa-1.18□□□□□ -2.6
HPS3-205ENST00000478525 FREM2Q5SZK8 3169 aa-1.18□□□□□ -2.6
HPS3-205ENST00000478525 PIK3C2BO00750 1634 aa-1.18□□□□□ -2.6
HPS3-205ENST00000478525 PVALEFA0A1B0GWK0 134 aa-1.19□□□□□ -2.6
HPS3-205ENST00000478525 A8MTW9 85 aa-1.19□□□□□ -2.6
HPS3-205ENST00000478525 RBP2P50120 134 aa-1.19□□□□□ -2.6
HPS3-205ENST00000478525 MINOS1Q5TGZ0 78 aa-1.19□□□□□ -2.6
HPS3-205ENST00000478525 C20orf78Q9BR46 151 aa-1.19□□□□□ -2.6
HPS3-205ENST00000478525 INO80Q9ULG1 1556 aaPredicted RBP-1.19□□□□□ -2.6
HPS3-205ENST00000478525 ANKRD26Q9UPS8 1709 aa-1.19□□□□□ -2.6
HPS3-205ENST00000478525 MAST1Q9Y2H9 1570 aa-1.2□□□□□ -2.6
HPS3-205ENST00000478525 CEP162Q5TB80 1403 aa-1.2□□□□□ -2.6
HPS3-205ENST00000478525 MAP3K4Q9Y6R4 1608 aa-1.2□□□□□ -2.6
HPS3-205ENST00000478525 RNF17Q9BXT8 1623 aaKnown RBP-1.21□□□□□ -2.6
HPS3-205ENST00000478525 M0QY20 66 aa-1.21□□□□□ -2.6
HPS3-205ENST00000478525 ATP5EP2Q5VTU8 51 aa-1.21□□□□□ -2.6
HPS3-205ENST00000478525 RALGAPBQ86X10 1494 aa-1.21□□□□□ -2.6
HPS3-205ENST00000478525 RICTORQ6R327 1708 aa-1.21□□□□□ -2.6
HPS3-205ENST00000478525 MYO5CQ9NQX4 1742 aa-1.21□□□□□ -2.6
HPS3-205ENST00000478525 CD163L1Q9NR16 1453 aa-1.22□□□□□ -2.6
HPS3-205ENST00000478525 ARHGAP35Q9NRY4 1499 aa-1.22□□□□□ -2.6
HPS3-205ENST00000478525 RPS27P42677 84 aaKnown RBP-1.22□□□□□ -2.6
HPS3-205ENST00000478525 NREPQ16612 68 aa-1.22□□□□□ -2.6
HPS3-205ENST00000478525 PYY3Q5JQD4 70 aa-1.22□□□□□ -2.6
HPS3-205ENST00000478525 RPS27LQ71UM5 84 aaKnown RBP-1.22□□□□□ -2.6
HPS3-205ENST00000478525 KCNQ1DNQ9H478 68 aa-1.22□□□□□ -2.6
HPS3-205ENST00000478525 NHSQ6T4R5 1651 aa-1.23□□□□□ -2.61
HPS3-205ENST00000478525 CNTLNQ9NXG0 1405 aa-1.23□□□□□ -2.61
HPS3-205ENST00000478525 KANTRA0A1W2PQU2 76 aa-1.23□□□□□ -2.61
HPS3-205ENST00000478525 ATP6V1G2-DDX39BF2Z307 99 aa-1.23□□□□□ -2.61
HPS3-205ENST00000478525 SPART-AS1P0CW21 52 aa-1.23□□□□□ -2.61
HPS3-205ENST00000478525 SMARCA2P51531 1590 aa-1.23□□□□□ -2.61
HPS3-205ENST00000478525 ZFHX4Q86UP3 3567 aa-1.24□□□□□ -2.61
HPS3-205ENST00000478525 C6orf48Q9UBA6 75 aa-1.24□□□□□ -2.61
HPS3-205ENST00000478525 CRYBG3Q68DQ2 2970 aa-1.25□□□□□ -2.61
HPS3-205ENST00000478525 A0A087WXM4 84 aa-1.25□□□□□ -2.61
HPS3-205ENST00000478525 M0R143 59 aa-1.25□□□□□ -2.61
HPS3-205ENST00000478525 CSMD2Q7Z408 3487 aa-1.25□□□□□ -2.61
HPS3-205ENST00000478525 MYO15AQ9UKN7 3530 aa-1.26□□□□□ -2.61
HPS3-205ENST00000478525 CFAP54Q96N23 3096 aa-1.26□□□□□ -2.61
HPS3-205ENST00000478525 LINC00587B1AMM8 73 aa-1.26□□□□□ -2.61
HPS3-205ENST00000478525 FCER1GP30273 86 aa-1.26□□□□□ -2.61
HPS3-205ENST00000478525 ABCC3O15438 1527 aa-1.26□□□□□ -2.61
HPS3-205ENST00000478525 KIF14Q15058 1648 aa-1.26□□□□□ -2.61
HPS3-205ENST00000478525 ETDCA0A1B0GVM5 59 aa-1.27□□□□□ -2.61
HPS3-205ENST00000478525 DEFB4AO15263 64 aa-1.27□□□□□ -2.61
HPS3-205ENST00000478525 CRIP1P50238 77 aa-1.27□□□□□ -2.61
HPS3-205ENST00000478525 S100A16Q96FQ6 103 aaKnown RBP-1.27□□□□□ -2.61
HPS3-205ENST00000478525 MROH1Q8NDA8 1641 aa-1.27□□□□□ -2.61
HPS3-205ENST00000478525 KDM5DQ9BY66 1539 aa-1.28□□□□□ -2.61
HPS3-205ENST00000478525 C14orf144Q96I85 54 aa-1.28□□□□□ -2.61
HPS3-205ENST00000478525 PREX2Q70Z35 1606 aa-1.29□□□□□ -2.62
HPS3-205ENST00000478525 TTC37Q6PGP7 1564 aa-1.29□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms