RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 ACYP2P14621 99 aa7.12□□□□□ -1.27
SGSM3-209ENST00000478085 CD164Q04900 197 aa7.12□□□□□ -1.27
SGSM3-209ENST00000478085 IGLV8-61A0A075B6I0 122 aa7.11□□□□□ -1.27
SGSM3-209ENST00000478085 SRRM2Q9UQ35 2752 aaKnown RBP7.1□□□□□ -1.27
SGSM3-209ENST00000478085 COA5Q86WW8 74 aa7.08□□□□□ -1.28
SGSM3-209ENST00000478085 ANK3Q12955 4377 aaKnown RBP7.08□□□□□ -1.28
SGSM3-209ENST00000478085 LINC00472Q9H8W2 130 aa7.08□□□□□ -1.28
SGSM3-209ENST00000478085 Q5VSD8 79 aa7.07□□□□□ -1.28
SGSM3-209ENST00000478085 A0A087X002 238 aa7.06□□□□□ -1.28
SGSM3-209ENST00000478085 IGLV7-46A0A075B6I9 117 aa7.03□□□□□ -1.28
SGSM3-209ENST00000478085 MMP24-AS1A0A0U1RRL7 71 aa7.03□□□□□ -1.28
SGSM3-209ENST00000478085 K7ERS5 55 aa7.02□□□□□ -1.29
SGSM3-209ENST00000478085 LINC00483Q53H64 154 aa7.01□□□□□ -1.29
SGSM3-209ENST00000478085 AKAP9Q99996 3911 aa7□□□□□ -1.29
SGSM3-209ENST00000478085 A0A1B0GU69 56 aa7□□□□□ -1.29
SGSM3-209ENST00000478085 ZCCHC13Q8WW36 166 aaKnown RBP6.99□□□□□ -1.29
SGSM3-209ENST00000478085 Q8N1X5 172 aa6.98□□□□□ -1.29
SGSM3-209ENST00000478085 KTN1-AS1Q86SY8 53 aa6.97□□□□□ -1.29
SGSM3-209ENST00000478085 Q8N9P0 234 aaPredicted RBP6.97□□□□□ -1.29
SGSM3-209ENST00000478085 FBN3Q75N90 2809 aa6.95□□□□□ -1.3
SGSM3-209ENST00000478085 KRTAP13-1Q8IUC0 172 aa6.94□□□□□ -1.3
SGSM3-209ENST00000478085 COX6B2Q6YFQ2 88 aa6.94□□□□□ -1.3
SGSM3-209ENST00000478085 CDC42SE1Q9NRR8 79 aa6.93□□□□□ -1.3
SGSM3-209ENST00000478085 Q5VV11 94 aa6.93□□□□□ -1.3
SGSM3-209ENST00000478085 Q75L30 129 aa6.92□□□□□ -1.3
SGSM3-209ENST00000478085 KRTAP29-1A8MX34 341 aaPredicted RBP6.89□□□□□ -1.31
SGSM3-209ENST00000478085 NOTCH2NLQ7Z3S9 236 aa6.89□□□□□ -1.31
SGSM3-209ENST00000478085 KRTAP13-2Q52LG2 175 aa6.88□□□□□ -1.31
SGSM3-209ENST00000478085 HRES1P13985 223 aa6.87□□□□□ -1.31
SGSM3-209ENST00000478085 COL7A1Q02388 2944 aa6.87□□□□□ -1.31
SGSM3-209ENST00000478085 Q6ZSA8 131 aa6.87□□□□□ -1.31
SGSM3-209ENST00000478085 LINC01558Q9Y6Z2 57 aa6.86□□□□□ -1.31
SGSM3-209ENST00000478085 Q5W150 140 aa6.84□□□□□ -1.31
SGSM3-209ENST00000478085 RBM12B-AS1Q9P1G2 102 aa6.83□□□□□ -1.32
SGSM3-209ENST00000478085 SPINK7P58062 85 aa6.81□□□□□ -1.32
SGSM3-209ENST00000478085 LCA10Q71F78 164 aa6.81□□□□□ -1.32
SGSM3-209ENST00000478085 UQCR11O14957 56 aa6.8□□□□□ -1.32
SGSM3-209ENST00000478085 MEGF8Q7Z7M0 2845 aa6.79□□□□□ -1.32
SGSM3-209ENST00000478085 MIR22HGQ0VDD5 57 aa6.74□□□□□ -1.33
SGSM3-209ENST00000478085 ASB16-AS1Q495Z4 193 aa6.71□□□□□ -1.34
SGSM3-209ENST00000478085 KRTAP1-4P0C5Y4 121 aa6.7□□□□□ -1.34
SGSM3-209ENST00000478085 A8MU10 97 aa6.69□□□□□ -1.34
SGSM3-209ENST00000478085 LINC01554Q52M75 96 aa6.66□□□□□ -1.34
SGSM3-209ENST00000478085 SEC61BP60468 96 aaKnown RBP6.65□□□□□ -1.34
SGSM3-209ENST00000478085 RPS29P62273 56 aaKnown RBP6.64□□□□□ -1.35
SGSM3-209ENST00000478085 A0A0D9SG42 100 aa6.63□□□□□ -1.35
SGSM3-209ENST00000478085 A6NN06 94 aa6.62□□□□□ -1.35
SGSM3-209ENST00000478085 CSMD3Q7Z407 3707 aa6.61□□□□□ -1.35
SGSM3-209ENST00000478085 M0R2T5 61 aa6.6□□□□□ -1.35
SGSM3-209ENST00000478085 DMAC1Q96GE9 116 aa6.6□□□□□ -1.35
SGSM3-209ENST00000478085 CSAG1Q6PB30 78 aa6.57□□□□□ -1.36
SGSM3-209ENST00000478085 A0A1B0GVY2 172 aa6.56□□□□□ -1.36
SGSM3-209ENST00000478085 S4R3F8 94 aa6.55□□□□□ -1.36
SGSM3-209ENST00000478085 PRAC1Q96KF2 57 aa6.55□□□□□ -1.36
SGSM3-209ENST00000478085 SPINT4Q6UDR6 99 aa6.55□□□□□ -1.36
SGSM3-209ENST00000478085 A0A1B0GU33 70 aa6.54□□□□□ -1.36
SGSM3-209ENST00000478085 SPATA8Q6RVD6 105 aa6.49□□□□□ -1.37
SGSM3-209ENST00000478085 DNHD1Q96M86 4753 aa6.48□□□□□ -1.37
SGSM3-209ENST00000478085 ANK2Q01484 3957 aa6.48□□□□□ -1.37
SGSM3-209ENST00000478085 HUWE1Q7Z6Z7 4374 aaKnown RBP6.47□□□□□ -1.37
SGSM3-209ENST00000478085 RPL37P61927 97 aaKnown RBP6.46□□□□□ -1.37
SGSM3-209ENST00000478085 A8MUU9 505 aa6.44□□□□□ -1.38
SGSM3-209ENST00000478085 C20orf166-AS1Q96NR2 134 aa6.42□□□□□ -1.38
SGSM3-209ENST00000478085 H3BS24 57 aa6.42□□□□□ -1.38
SGSM3-209ENST00000478085 R4GN34 69 aa6.39□□□□□ -1.39
SGSM3-209ENST00000478085 XP32Q5T750 250 aa6.39□□□□□ -1.39
SGSM3-209ENST00000478085 KRTAP10-8P60410 259 aa6.36□□□□□ -1.39
SGSM3-209ENST00000478085 H1FX-AS1Q4G0G2 97 aa6.36□□□□□ -1.39
SGSM3-209ENST00000478085 CAMK2N1Q7Z7J9 78 aa6.35□□□□□ -1.39
SGSM3-209ENST00000478085 KRTAP16-1A8MUX0 517 aa6.34□□□□□ -1.39
SGSM3-209ENST00000478085 CRIPTQ9P021 101 aa6.34□□□□□ -1.39
SGSM3-209ENST00000478085 ADM2Q7Z4H4 148 aa6.33□□□□□ -1.4
SGSM3-209ENST00000478085 DNAH9Q9NYC9 4486 aa6.32□□□□□ -1.4
SGSM3-209ENST00000478085 M0QZ58 72 aa6.29□□□□□ -1.4
SGSM3-209ENST00000478085 KRTAP13-3Q3SY46 172 aa6.27□□□□□ -1.41
SGSM3-209ENST00000478085 TPRXLQ17RH7 258 aa6.26□□□□□ -1.41
SGSM3-209ENST00000478085 LYSTQ99698 3801 aa6.25□□□□□ -1.41
SGSM3-209ENST00000478085 PRKDCP78527 4128 aaKnown RBP6.24□□□□□ -1.41
SGSM3-209ENST00000478085 PLECQ15149 4684 aaKnown RBP6.21□□□□□ -1.41
SGSM3-209ENST00000478085 CMYA5Q8N3K9 4069 aa6.18□□□□□ -1.42
SGSM3-209ENST00000478085 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
SGSM3-209ENST00000478085 ROMO1P60602 79 aa6.14□□□□□ -1.43
SGSM3-209ENST00000478085 DNAH10Q8IVF4 4471 aa6.12□□□□□ -1.43
SGSM3-209ENST00000478085 KRTAP4-5Q9BYR2 181 aa6.09□□□□□ -1.43
SGSM3-209ENST00000478085 DNAH11Q96DT5 4516 aa6.08□□□□□ -1.44
SGSM3-209ENST00000478085 KRTAP10-4P60372 401 aaPredicted RBP6.08□□□□□ -1.44
SGSM3-209ENST00000478085 DNAH5Q8TE73 4624 aa6.08□□□□□ -1.44
SGSM3-209ENST00000478085 STARD9Q9P2P6 4700 aa6.07□□□□□ -1.44
SGSM3-209ENST00000478085 MT1HL1P0DM35 61 aa6.06□□□□□ -1.44
SGSM3-209ENST00000478085 DNAH1Q9P2D7 4330 aa6.05□□□□□ -1.44
SGSM3-209ENST00000478085 KMT2AQ03164 3969 aa6.03□□□□□ -1.44
SGSM3-209ENST00000478085 H0YAA0 97 aa6.03□□□□□ -1.44
SGSM3-209ENST00000478085 DNAH7Q8WXX0 4024 aa6.03□□□□□ -1.44
SGSM3-209ENST00000478085 PLAC4Q8WY50 150 aa6.02□□□□□ -1.45
SGSM3-209ENST00000478085 VPS13DQ5THJ4 4388 aa5.97□□□□□ -1.45
SGSM3-209ENST00000478085 P0C880 135 aa5.95□□□□□ -1.46
SGSM3-209ENST00000478085 DNAH3Q8TD57 4116 aa5.95□□□□□ -1.46
SGSM3-209ENST00000478085 FAT1Q14517 4588 aa5.95□□□□□ -1.46
SGSM3-209ENST00000478085 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
SGSM3-209ENST00000478085 DYNC1H1Q14204 4646 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms