RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PRLHP81277 87 aa3.07□□□□□ -1.92
SF3B6-202ENST00000478050 IGFL1Q6UW32 110 aa3.07□□□□□ -1.92
SF3B6-202ENST00000478050 HIGD2AQ9BW72 106 aa3.07□□□□□ -1.92
SF3B6-202ENST00000478050 DNAH10Q8IVF4 4471 aa3.07□□□□□ -1.92
SF3B6-202ENST00000478050 ALMS1Q8TCU4 4167 aa3.06□□□□□ -1.92
SF3B6-202ENST00000478050 A0A0U1RQV1 116 aa3.06□□□□□ -1.92
SF3B6-202ENST00000478050 LRCOL1A6NCL2 159 aa3.06□□□□□ -1.92
SF3B6-202ENST00000478050 EPM2AB3EWF7 344 aa3.06□□□□□ -1.92
SF3B6-202ENST00000478050 OXTP01178 125 aa3.06□□□□□ -1.92
SF3B6-202ENST00000478050 FLG2Q5D862 2391 aaPredicted RBP3.06□□□□□ -1.92
SF3B6-202ENST00000478050 PHF5AQ7RTV0 110 aaKnown RBP3.06□□□□□ -1.92
SF3B6-202ENST00000478050 HCG22E2RYF7 251 aa3.05□□□□□ -1.92
SF3B6-202ENST00000478050 CHTF8P0CG12 524 aa3.05□□□□□ -1.92
SF3B6-202ENST00000478050 Q6ZRN7 208 aaPredicted RBP3.05□□□□□ -1.92
SF3B6-202ENST00000478050 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
SF3B6-202ENST00000478050 SRRM2Q9UQ35 2752 aaKnown RBP3.05□□□□□ -1.92
SF3B6-202ENST00000478050 PLECQ15149 4684 aaKnown RBP3.04□□□□□ -1.92
SF3B6-202ENST00000478050 A0A087WSZ3 146 aa3.04□□□□□ -1.92
SF3B6-202ENST00000478050 K7EQZ3 153 aa3.04□□□□□ -1.92
SF3B6-202ENST00000478050 VPS13DQ5THJ4 4388 aa3.04□□□□□ -1.92
SF3B6-202ENST00000478050 SMIM26A0A096LP01 95 aa3.03□□□□□ -1.92
SF3B6-202ENST00000478050 C5orf47Q569G3 176 aa3.03□□□□□ -1.92
SF3B6-202ENST00000478050 LINC00336Q6ZUF6 198 aa3.03□□□□□ -1.92
SF3B6-202ENST00000478050 KRTAP13-1Q8IUC0 172 aa3.03□□□□□ -1.92
SF3B6-202ENST00000478050 KRTAP11-1Q8IUC1 163 aa3.03□□□□□ -1.92
SF3B6-202ENST00000478050 DNAH6Q9C0G6 4158 aa3.02□□□□□ -1.93
SF3B6-202ENST00000478050 KRTAP10-5P60370 271 aa3.02□□□□□ -1.93
SF3B6-202ENST00000478050 RPL37AP61513 92 aaKnown RBP3.02□□□□□ -1.93
SF3B6-202ENST00000478050 Q5XG85 94 aa3.02□□□□□ -1.93
SF3B6-202ENST00000478050 SPACA4Q8TDM5 124 aa3.02□□□□□ -1.93
SF3B6-202ENST00000478050 PRAC1Q96KF2 57 aa3.02□□□□□ -1.93
SF3B6-202ENST00000478050 DNAH17Q9UFH2 4485 aa3.02□□□□□ -1.93
SF3B6-202ENST00000478050 A0A087WTM6 91 aa3.01□□□□□ -1.93
SF3B6-202ENST00000478050 A0A0G2JQZ4 141 aa3.01□□□□□ -1.93
SF3B6-202ENST00000478050 A8MWP4 228 aa3.01□□□□□ -1.93
SF3B6-202ENST00000478050 ZCCHC13Q8WW36 166 aaKnown RBP3.01□□□□□ -1.93
SF3B6-202ENST00000478050 ZNF706Q9Y5V0 76 aaPredicted RBP3.01□□□□□ -1.93
SF3B6-202ENST00000478050 H3BPC8 53 aa3□□□□□ -1.93
SF3B6-202ENST00000478050 PANO1I0J062 215 aa3□□□□□ -1.93
SF3B6-202ENST00000478050 NDUFB1O75438 58 aa3□□□□□ -1.93
SF3B6-202ENST00000478050 MP68P56378 58 aa3□□□□□ -1.93
SF3B6-202ENST00000478050 DEFB116Q30KQ4 102 aa3□□□□□ -1.93
SF3B6-202ENST00000478050 LINC00483Q53H64 154 aa3□□□□□ -1.93
SF3B6-202ENST00000478050 WFDC13Q8IUB5 93 aa3□□□□□ -1.93
SF3B6-202ENST00000478050 PRR15Q8IV56 129 aa3□□□□□ -1.93
SF3B6-202ENST00000478050 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
SF3B6-202ENST00000478050 LINC00472Q9H8W2 130 aa3□□□□□ -1.93
SF3B6-202ENST00000478050 RTL8CO15255 209 aa2.99□□□□□ -1.93
SF3B6-202ENST00000478050 C4orf26Q17RF5 130 aa2.99□□□□□ -1.93
SF3B6-202ENST00000478050 CASC2Q6XLA1 102 aa2.99□□□□□ -1.93
SF3B6-202ENST00000478050 HRCT1Q6UXD1 115 aa2.98□□□□□ -1.93
SF3B6-202ENST00000478050 Q6ZR54 194 aa2.98□□□□□ -1.93
SF3B6-202ENST00000478050 FP248Q71RG6 208 aaPredicted RBP2.98□□□□□ -1.93
SF3B6-202ENST00000478050 CYP4F30PQ9H0H9 118 aa2.98□□□□□ -1.93
SF3B6-202ENST00000478050 PLAC8Q9NZF1 115 aa2.98□□□□□ -1.93
SF3B6-202ENST00000478050 KMT2AQ03164 3969 aa2.98□□□□□ -1.93
SF3B6-202ENST00000478050 PKHD1P08F94 4074 aa2.98□□□□□ -1.93
SF3B6-202ENST00000478050 DNAH2Q9P225 4427 aa2.97□□□□□ -1.93
SF3B6-202ENST00000478050 DNAH11Q96DT5 4516 aa2.97□□□□□ -1.93
SF3B6-202ENST00000478050 HSPG2P98160 4391 aa2.97□□□□□ -1.93
SF3B6-202ENST00000478050 TRAV22A0A0B4J277 110 aa2.97□□□□□ -1.93
SF3B6-202ENST00000478050 A0A1B0GVY2 172 aa2.97□□□□□ -1.93
SF3B6-202ENST00000478050 hDV103S1A0JD37 113 aa2.97□□□□□ -1.93
SF3B6-202ENST00000478050 H0Y9P7 68 aa2.97□□□□□ -1.93
SF3B6-202ENST00000478050 MOBPQ13875 183 aa2.97□□□□□ -1.93
SF3B6-202ENST00000478050 DNAH8Q96JB1 4490 aa2.96□□□□□ -1.94
SF3B6-202ENST00000478050 MMP24-AS1A0A0U1RRL7 71 aa2.96□□□□□ -1.94
SF3B6-202ENST00000478050 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
SF3B6-202ENST00000478050 ZNF861PO60384 105 aa2.96□□□□□ -1.94
SF3B6-202ENST00000478050 C1orf134Q5TEV5 83 aa2.96□□□□□ -1.94
SF3B6-202ENST00000478050 SPANXA2-OT1Q8N9U9 137 aa2.96□□□□□ -1.94
SF3B6-202ENST00000478050 LINC00208Q96KT6 92 aa2.96□□□□□ -1.94
SF3B6-202ENST00000478050 PSORS1C2Q9UIG4 136 aa2.96□□□□□ -1.94
SF3B6-202ENST00000478050 DYNC1H1Q14204 4646 aaKnown RBP2.95□□□□□ -1.94
SF3B6-202ENST00000478050 FAM229BQ4G0N7 80 aa2.95□□□□□ -1.94
SF3B6-202ENST00000478050 Q96NJ1 140 aa2.95□□□□□ -1.94
SF3B6-202ENST00000478050 TP53AIP1Q9HCN2 124 aa2.95□□□□□ -1.94
SF3B6-202ENST00000478050 A0A1B0GVX0 72 aa2.94□□□□□ -1.94
SF3B6-202ENST00000478050 ASB16-AS1Q495Z4 193 aa2.94□□□□□ -1.94
SF3B6-202ENST00000478050 C1orf64Q8NEQ6 169 aa2.94□□□□□ -1.94
SF3B6-202ENST00000478050 C8orf17Q9NRJ1 99 aa2.94□□□□□ -1.94
SF3B6-202ENST00000478050 IGLV7-43P04211 117 aa2.93□□□□□ -1.94
SF3B6-202ENST00000478050 CD164Q04900 197 aa2.93□□□□□ -1.94
SF3B6-202ENST00000478050 Q1T7F1 81 aa2.92□□□□□ -1.94
SF3B6-202ENST00000478050 V9GYY9 64 aa2.92□□□□□ -1.94
SF3B6-202ENST00000478050 DNAH5Q8TE73 4624 aa2.91□□□□□ -1.94
SF3B6-202ENST00000478050 IGHV6-1A0A0B4J1U7 121 aa2.91□□□□□ -1.94
SF3B6-202ENST00000478050 SSBP3-AS1Q7Z2R9 100 aa2.91□□□□□ -1.94
SF3B6-202ENST00000478050 MRPL34Q9BQ48 92 aaKnown RBP2.91□□□□□ -1.94
SF3B6-202ENST00000478050 PRO0628Q9UI54 55 aa2.91□□□□□ -1.94
SF3B6-202ENST00000478050 PRR4Q16378 134 aa2.9□□□□□ -1.95
SF3B6-202ENST00000478050 HMCN2Q8NDA2 5059 aa2.9□□□□□ -1.95
SF3B6-202ENST00000478050 IGLV7-46A0A075B6I9 117 aa2.89□□□□□ -1.95
SF3B6-202ENST00000478050 C8orf87E5RJ46 101 aa2.89□□□□□ -1.95
SF3B6-202ENST00000478050 NDUFS5O43920 106 aa2.89□□□□□ -1.95
SF3B6-202ENST00000478050 C1orf195Q5TG92 126 aa2.89□□□□□ -1.95
SF3B6-202ENST00000478050 ANAPC11Q9NYG5 84 aa2.89□□□□□ -1.95
SF3B6-202ENST00000478050 MUC2Q02817 5179 aa2.88□□□□□ -1.95
SF3B6-202ENST00000478050 CIRBP-AS1Q8TBR5 109 aa2.88□□□□□ -1.95
SF3B6-202ENST00000478050 MYCBP2O75592 4640 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms