RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 IFITM1P13164 125 aa2.89□□□□□ -1.95
LINC00173-202ENST00000477702 SOSTDC1Q6X4U4 206 aa2.89□□□□□ -1.95
LINC00173-202ENST00000477702 YPEL4Q96NS1 127 aa2.89□□□□□ -1.95
LINC00173-202ENST00000477702 SNHG12Q9BXW3 62 aa2.89□□□□□ -1.95
LINC00173-202ENST00000477702 TRAV13-2A0A0B4J235 113 aa2.88□□□□□ -1.95
LINC00173-202ENST00000477702 SNCGO76070 127 aa2.88□□□□□ -1.95
LINC00173-202ENST00000477702 SPRR2EP22531 72 aa2.88□□□□□ -1.95
LINC00173-202ENST00000477702 SPRR2BP35325 72 aa2.88□□□□□ -1.95
LINC00173-202ENST00000477702 SPRR2AP35326 72 aa2.88□□□□□ -1.95
LINC00173-202ENST00000477702 MTURNQ8N3F0 131 aa2.88□□□□□ -1.95
LINC00173-202ENST00000477702 VPS25Q9BRG1 176 aa2.88□□□□□ -1.95
LINC00173-202ENST00000477702 RBM12B-AS1Q9P1G2 102 aa2.88□□□□□ -1.95
LINC00173-202ENST00000477702 HRES1P13985 223 aa2.87□□□□□ -1.95
LINC00173-202ENST00000477702 Q6JHZ5 121 aa2.87□□□□□ -1.95
LINC00173-202ENST00000477702 IGFL1Q6UW32 110 aa2.87□□□□□ -1.95
LINC00173-202ENST00000477702 K7ERU9 68 aa2.86□□□□□ -1.95
LINC00173-202ENST00000477702 COL5A1-AS1Q5SY13 56 aa2.86□□□□□ -1.95
LINC00173-202ENST00000477702 LINC01545Q5VT33 79 aa2.86□□□□□ -1.95
LINC00173-202ENST00000477702 IGLV5-48A0A075B6I7 105 aa2.85□□□□□ -1.95
LINC00173-202ENST00000477702 A8MUU9 505 aa2.85□□□□□ -1.95
LINC00173-202ENST00000477702 KRTDAPP60985 99 aa2.85□□□□□ -1.95
LINC00173-202ENST00000477702 OCIAD2Q56VL3 154 aa2.85□□□□□ -1.95
LINC00173-202ENST00000477702 hADV29S1A0JD25 119 aa2.84□□□□□ -1.95
LINC00173-202ENST00000477702 A8MWP4 228 aa2.84□□□□□ -1.95
LINC00173-202ENST00000477702 MUSTN1Q8IVN3 82 aa2.84□□□□□ -1.95
LINC00173-202ENST00000477702 HIST3H2BBQ8N257 126 aa2.84□□□□□ -1.95
LINC00173-202ENST00000477702 LST1O00453 97 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 HIST1H2BKO60814 126 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 HIST1H2BJP06899 126 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 C3orf79P0CE67 100 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 HIST1H2BOP23527 126 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 HIST1H2BBP33778 126 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 HIST1H2BDP58876 126 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 HIST1H2BCP62807 126 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 HIST2H2BEQ16778 126 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.83□□□□□ -1.96
LINC00173-202ENST00000477702 SMIM11BQ8TCY0 68 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 CLEC2BQ92478 149 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 HIST1H2BHQ93079 126 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 SPRR2FQ96RM1 72 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 HIST1H2BNQ99877 126 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 HIST1H2BMQ99879 126 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 SS18L2Q9UHA2 77 aa2.83□□□□□ -1.96
LINC00173-202ENST00000477702 TRBV7-7A0A0K0K1E9 115 aa2.82□□□□□ -1.96
LINC00173-202ENST00000477702 C5orf47Q569G3 176 aa2.82□□□□□ -1.96
LINC00173-202ENST00000477702 BVES-AS1Q5T3Y7 98 aa2.82□□□□□ -1.96
LINC00173-202ENST00000477702 PPDPFLQ8WWR9 84 aa2.82□□□□□ -1.96
LINC00173-202ENST00000477702 TTTY13Q9BZ97 58 aa2.82□□□□□ -1.96
LINC00173-202ENST00000477702 COA6Q5JTJ3 125 aaKnown RBP2.81□□□□□ -1.96
LINC00173-202ENST00000477702 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.81□□□□□ -1.96
LINC00173-202ENST00000477702 LINC00575Q6W349 94 aa2.81□□□□□ -1.96
LINC00173-202ENST00000477702 Q6ZQY7 126 aa2.81□□□□□ -1.96
LINC00173-202ENST00000477702 HIST1H2BLQ99880 126 aa2.81□□□□□ -1.96
LINC00173-202ENST00000477702 ATOH7Q8N100 152 aa2.8□□□□□ -1.96
LINC00173-202ENST00000477702 MT1BP07438 61 aa2.79□□□□□ -1.96
LINC00173-202ENST00000477702 SPRR2DP22532 72 aa2.78□□□□□ -1.96
LINC00173-202ENST00000477702 TEN1Q86WV5 123 aa2.78□□□□□ -1.96
LINC00173-202ENST00000477702 HIST1H4GQ99525 98 aa2.78□□□□□ -1.96
LINC00173-202ENST00000477702 SIGMAR1Q99720 223 aa2.78□□□□□ -1.96
LINC00173-202ENST00000477702 H0YGX0 51 aa2.77□□□□□ -1.97
LINC00173-202ENST00000477702 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
LINC00173-202ENST00000477702 RAB37Q96AX2 223 aa2.77□□□□□ -1.97
LINC00173-202ENST00000477702 H3BMG7 143 aa2.75□□□□□ -1.97
LINC00173-202ENST00000477702 H3BQ85 93 aa2.75□□□□□ -1.97
LINC00173-202ENST00000477702 H3BUT2 72 aa2.75□□□□□ -1.97
LINC00173-202ENST00000477702 FABP2P12104 132 aa2.75□□□□□ -1.97
LINC00173-202ENST00000477702 LINC00313P59037 77 aa2.75□□□□□ -1.97
LINC00173-202ENST00000477702 Q5VV11 94 aa2.75□□□□□ -1.97
LINC00173-202ENST00000477702 UQCR10Q9UDW1 63 aa2.75□□□□□ -1.97
LINC00173-202ENST00000477702 A0A087WSZ3 146 aa2.74□□□□□ -1.97
LINC00173-202ENST00000477702 BATFQ16520 125 aa2.74□□□□□ -1.97
LINC00173-202ENST00000477702 A0A1B0GX51 115 aa2.73□□□□□ -1.97
LINC00173-202ENST00000477702 A0A1W2PNM2 257 aa2.73□□□□□ -1.97
LINC00173-202ENST00000477702 J3QR89 54 aa2.73□□□□□ -1.97
LINC00173-202ENST00000477702 DNAL4O96015 105 aa2.73□□□□□ -1.97
LINC00173-202ENST00000477702 SMIM20Q8N5G0 67 aa2.73□□□□□ -1.97
LINC00173-202ENST00000477702 VAMP8Q9BV40 100 aa2.73□□□□□ -1.97
LINC00173-202ENST00000477702 IGKV4-1P06312 121 aa2.72□□□□□ -1.97
LINC00173-202ENST00000477702 HSD52Q0P140 79 aa2.72□□□□□ -1.97
LINC00173-202ENST00000477702 GTF2H5Q6ZYL4 71 aa2.72□□□□□ -1.97
LINC00173-202ENST00000477702 ANKRD29Q8N6D5 301 aa2.72□□□□□ -1.97
LINC00173-202ENST00000477702 PRO0461Q9UI25 63 aa2.72□□□□□ -1.97
LINC00173-202ENST00000477702 COX6CP09669 75 aa2.71□□□□□ -1.98
LINC00173-202ENST00000477702 COX8AP10176 69 aa2.71□□□□□ -1.98
LINC00173-202ENST00000477702 A0A0B4J2C4 111 aa2.7□□□□□ -1.98
LINC00173-202ENST00000477702 TRBV7-4A0A0J9YYF1 115 aa2.7□□□□□ -1.98
LINC00173-202ENST00000477702 TMEM256-PLSCR3K7ERE1 68 aa2.7□□□□□ -1.98
LINC00173-202ENST00000477702 TAX1BP3O14907 124 aa2.7□□□□□ -1.98
LINC00173-202ENST00000477702 TRACP01848 142 aa2.7□□□□□ -1.98
LINC00173-202ENST00000477702 SPINK7P58062 85 aa2.7□□□□□ -1.98
LINC00173-202ENST00000477702 SEC61GP60059 68 aa2.7□□□□□ -1.98
LINC00173-202ENST00000477702 KRTAP19-8Q3LI54 63 aa2.7□□□□□ -1.98
LINC00173-202ENST00000477702 ORMDL1Q9P0S3 153 aa2.7□□□□□ -1.98
LINC00173-202ENST00000477702 PRO1854Q9UHT4 67 aa2.7□□□□□ -1.98
LINC00173-202ENST00000477702 IGHV6-1A0A0B4J1U7 121 aa2.69□□□□□ -1.98
LINC00173-202ENST00000477702 PSMB2P49721 201 aa2.69□□□□□ -1.98
LINC00173-202ENST00000477702 LYRM7Q5U5X0 104 aa2.69□□□□□ -1.98
LINC00173-202ENST00000477702 WFDC13Q8IUB5 93 aa2.69□□□□□ -1.98
LINC00173-202ENST00000477702 C8orf87E5RJ46 101 aa2.68□□□□□ -1.98
LINC00173-202ENST00000477702 K7EP34 96 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms