RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 PPDPFLQ8WWR9 84 aa4.57□□□□□ -1.68
COL4A5-204ENST00000477429 A8MWP4 228 aa4.56□□□□□ -1.68
COL4A5-204ENST00000477429 IGKV4-1P06312 121 aa4.56□□□□□ -1.68
COL4A5-204ENST00000477429 NDUFV3P56181 108 aaKnown RBP4.56□□□□□ -1.68
COL4A5-204ENST00000477429 IGKV2-30P06310 120 aa4.55□□□□□ -1.68
COL4A5-204ENST00000477429 SPINK7P58062 85 aa4.55□□□□□ -1.68
COL4A5-204ENST00000477429 IGHV6-1A0A0B4J1U7 121 aa4.53□□□□□ -1.68
COL4A5-204ENST00000477429 KRTAP4-8A0A0G2JLE6 195 aa4.53□□□□□ -1.68
COL4A5-204ENST00000477429 LINC00472Q9H8W2 130 aa4.52□□□□□ -1.69
COL4A5-204ENST00000477429 H3BMG7 143 aa4.51□□□□□ -1.69
COL4A5-204ENST00000477429 MT1BP07438 61 aa4.51□□□□□ -1.69
COL4A5-204ENST00000477429 SEC61GP60059 68 aa4.51□□□□□ -1.69
COL4A5-204ENST00000477429 LCE5AQ5TCM9 118 aa4.51□□□□□ -1.69
COL4A5-204ENST00000477429 ZCCHC13Q8WW36 166 aaKnown RBP4.51□□□□□ -1.69
COL4A5-204ENST00000477429 A0A1B0GV72 72 aa4.5□□□□□ -1.69
COL4A5-204ENST00000477429 BVES-AS1Q5T3Y7 98 aa4.5□□□□□ -1.69
COL4A5-204ENST00000477429 WFDC13Q8IUB5 93 aa4.5□□□□□ -1.69
COL4A5-204ENST00000477429 SPRR2EP22531 72 aa4.49□□□□□ -1.69
COL4A5-204ENST00000477429 SPRR2BP35325 72 aa4.49□□□□□ -1.69
COL4A5-204ENST00000477429 SPRR2AP35326 72 aa4.49□□□□□ -1.69
COL4A5-204ENST00000477429 MTURNQ8N3F0 131 aa4.49□□□□□ -1.69
COL4A5-204ENST00000477429 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
COL4A5-204ENST00000477429 A6NN06 94 aa4.48□□□□□ -1.69
COL4A5-204ENST00000477429 COA6Q5JTJ3 125 aaKnown RBP4.48□□□□□ -1.69
COL4A5-204ENST00000477429 PCP4L1A6NKN8 68 aa4.46□□□□□ -1.7
COL4A5-204ENST00000477429 FABP2P12104 132 aa4.46□□□□□ -1.7
COL4A5-204ENST00000477429 DSTQ03001 7570 aaKnown RBP4.44□□□□□ -1.7
COL4A5-204ENST00000477429 TRBV7-4A0A0J9YYF1 115 aa4.44□□□□□ -1.7
COL4A5-204ENST00000477429 A0A1B0GVX0 72 aa4.44□□□□□ -1.7
COL4A5-204ENST00000477429 S100A6P06703 90 aa4.43□□□□□ -1.7
COL4A5-204ENST00000477429 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
COL4A5-204ENST00000477429 HIST1H4GQ99525 98 aa4.42□□□□□ -1.7
COL4A5-204ENST00000477429 C8orf87E5RJ46 101 aa4.41□□□□□ -1.7
COL4A5-204ENST00000477429 H0YGX0 51 aa4.41□□□□□ -1.7
COL4A5-204ENST00000477429 ANKRD29Q8N6D5 301 aa4.41□□□□□ -1.7
COL4A5-204ENST00000477429 RAB37Q96AX2 223 aa4.41□□□□□ -1.7
COL4A5-204ENST00000477429 H1FX-AS1Q4G0G2 97 aa4.4□□□□□ -1.71
COL4A5-204ENST00000477429 CCKP06307 115 aa4.39□□□□□ -1.71
COL4A5-204ENST00000477429 KRTAP19-8Q3LI54 63 aa4.39□□□□□ -1.71
COL4A5-204ENST00000477429 KRTAP4-9Q9BYQ8 210 aa4.39□□□□□ -1.71
COL4A5-204ENST00000477429 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
COL4A5-204ENST00000477429 TRACP01848 142 aa4.37□□□□□ -1.71
COL4A5-204ENST00000477429 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
COL4A5-204ENST00000477429 KRTAP5-10Q6L8G5 202 aa4.37□□□□□ -1.71
COL4A5-204ENST00000477429 OCR1Q9BZK8 76 aa4.37□□□□□ -1.71
COL4A5-204ENST00000477429 A0A0B4J2C4 111 aa4.36□□□□□ -1.71
COL4A5-204ENST00000477429 HIST1H2BLQ99880 126 aa4.36□□□□□ -1.71
COL4A5-204ENST00000477429 HMCN1Q96RW7 5635 aa4.36□□□□□ -1.71
COL4A5-204ENST00000477429 A0A1B0GX51 115 aa4.35□□□□□ -1.71
COL4A5-204ENST00000477429 SPRR2DP22532 72 aa4.35□□□□□ -1.71
COL4A5-204ENST00000477429 Q5VV11 94 aa4.35□□□□□ -1.71
COL4A5-204ENST00000477429 HIST3H2BBQ8N257 126 aa4.35□□□□□ -1.71
COL4A5-204ENST00000477429 IGKV2D-30A0A075B6S6 120 aa4.34□□□□□ -1.71
COL4A5-204ENST00000477429 COX8AP10176 69 aa4.34□□□□□ -1.71
COL4A5-204ENST00000477429 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
COL4A5-204ENST00000477429 C2orf91Q6ZV80 131 aa4.33□□□□□ -1.72
COL4A5-204ENST00000477429 SPRR2GQ9BYE4 73 aa4.33□□□□□ -1.72
COL4A5-204ENST00000477429 C8orf17Q9NRJ1 99 aa4.33□□□□□ -1.72
COL4A5-204ENST00000477429 HSBP1L1C9JCN9 74 aa4.32□□□□□ -1.72
COL4A5-204ENST00000477429 SNCGO76070 127 aa4.32□□□□□ -1.72
COL4A5-204ENST00000477429 CEND1Q8N111 149 aa4.32□□□□□ -1.72
COL4A5-204ENST00000477429 C14orf144Q96I85 54 aa4.32□□□□□ -1.72
COL4A5-204ENST00000477429 VPS25Q9BRG1 176 aa4.32□□□□□ -1.72
COL4A5-204ENST00000477429 IGKV3D-7A0A0C4DH55 119 aa4.31□□□□□ -1.72
COL4A5-204ENST00000477429 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
COL4A5-204ENST00000477429 KRTAP5-7Q6L8G8 165 aa4.31□□□□□ -1.72
COL4A5-204ENST00000477429 SPRR2FQ96RM1 72 aa4.31□□□□□ -1.72
COL4A5-204ENST00000477429 ORMDL1Q9P0S3 153 aa4.31□□□□□ -1.72
COL4A5-204ENST00000477429 FXYD2P54710 66 aa4.3□□□□□ -1.72
COL4A5-204ENST00000477429 LYRM7Q5U5X0 104 aa4.3□□□□□ -1.72
COL4A5-204ENST00000477429 PRO1854Q9UHT4 67 aa4.3□□□□□ -1.72
COL4A5-204ENST00000477429 DLEU1O43261 78 aa4.29□□□□□ -1.72
COL4A5-204ENST00000477429 C5orf47Q569G3 176 aa4.29□□□□□ -1.72
COL4A5-204ENST00000477429 RBM3P98179 157 aaKnown RBP4.28□□□□□ -1.72
COL4A5-204ENST00000477429 Q6ZQT0 140 aa4.27□□□□□ -1.73
COL4A5-204ENST00000477429 FAM236AA0A1B0GUQ0 79 aa4.26□□□□□ -1.73
COL4A5-204ENST00000477429 FAM236BA0A1B0GV22 79 aa4.26□□□□□ -1.73
COL4A5-204ENST00000477429 J3KT08 172 aa4.26□□□□□ -1.73
COL4A5-204ENST00000477429 TMEM256-PLSCR3K7ERE1 68 aa4.26□□□□□ -1.73
COL4A5-204ENST00000477429 K7ERJ3 54 aa4.26□□□□□ -1.73
COL4A5-204ENST00000477429 Q5W150 140 aa4.26□□□□□ -1.73
COL4A5-204ENST00000477429 HIGD1BQ9P298 99 aa4.26□□□□□ -1.73
COL4A5-204ENST00000477429 DNAL4O96015 105 aa4.25□□□□□ -1.73
COL4A5-204ENST00000477429 MMP24-AS1A0A0U1RRL7 71 aa4.24□□□□□ -1.73
COL4A5-204ENST00000477429 C4orf26Q17RF5 130 aa4.24□□□□□ -1.73
COL4A5-204ENST00000477429 S100A2P29034 98 aa4.23□□□□□ -1.73
COL4A5-204ENST00000477429 NDUFB1O75438 58 aa4.22□□□□□ -1.73
COL4A5-204ENST00000477429 SPATA45Q537H7 98 aa4.21□□□□□ -1.74
COL4A5-204ENST00000477429 MRPL34Q9BQ48 92 aaKnown RBP4.21□□□□□ -1.74
COL4A5-204ENST00000477429 H3BQ85 93 aa4.2□□□□□ -1.74
COL4A5-204ENST00000477429 PSMB2P49721 201 aa4.2□□□□□ -1.74
COL4A5-204ENST00000477429 PRR15Q8IV56 129 aa4.2□□□□□ -1.74
COL4A5-204ENST00000477429 DSCR8Q96T75 97 aa4.2□□□□□ -1.74
COL4A5-204ENST00000477429 TMEM254Q8TBM7 123 aa4.19□□□□□ -1.74
COL4A5-204ENST00000477429 KRTAP4-2Q9BYR5 136 aa4.19□□□□□ -1.74
COL4A5-204ENST00000477429 C9JAW5 83 aa4.18□□□□□ -1.74
COL4A5-204ENST00000477429 KLKP1Q107X0 134 aa4.17□□□□□ -1.74
COL4A5-204ENST00000477429 C7orf65Q6ZTY9 151 aa4.17□□□□□ -1.74
COL4A5-204ENST00000477429 LCA10Q71F78 164 aa4.17□□□□□ -1.74
COL4A5-204ENST00000477429 K7EQZ3 153 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms