RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 C1orf195Q5TG92 126 aa7.4□□□□□ -1.22
HLA-DPA1-246ENST00000476642 A0A087WSZ3 146 aa7.38□□□□□ -1.23
HLA-DPA1-246ENST00000476642 A0A1W2PNM2 257 aa7.38□□□□□ -1.23
HLA-DPA1-246ENST00000476642 COX7CP15954 63 aa7.38□□□□□ -1.23
HLA-DPA1-246ENST00000476642 KRTAP13-3Q3SY46 172 aa7.37□□□□□ -1.23
HLA-DPA1-246ENST00000476642 A0A1B0GW54 56 aa7.36□□□□□ -1.23
HLA-DPA1-246ENST00000476642 J3KT08 172 aa7.36□□□□□ -1.23
HLA-DPA1-246ENST00000476642 LOC110117498A0A087WWA1 95 aa7.35□□□□□ -1.23
HLA-DPA1-246ENST00000476642 HIST1H4AP62805 103 aaKnown RBP7.35□□□□□ -1.23
HLA-DPA1-246ENST00000476642 RPS28P62857 69 aaKnown RBP7.35□□□□□ -1.23
HLA-DPA1-246ENST00000476642 ATP5EP2Q5VTU8 51 aa7.34□□□□□ -1.23
HLA-DPA1-246ENST00000476642 OBSCN-AS1Q96MR7 158 aa7.33□□□□□ -1.24
HLA-DPA1-246ENST00000476642 TMEM258P61165 79 aa7.32□□□□□ -1.24
HLA-DPA1-246ENST00000476642 Q6ZQT0 140 aa7.31□□□□□ -1.24
HLA-DPA1-246ENST00000476642 C14orf132Q9NPU4 83 aa7.3□□□□□ -1.24
HLA-DPA1-246ENST00000476642 SERP2Q8N6R1 65 aa7.29□□□□□ -1.24
HLA-DPA1-246ENST00000476642 C5orf47Q569G3 176 aa7.27□□□□□ -1.25
HLA-DPA1-246ENST00000476642 C9orf92A6NGG3 77 aa7.26□□□□□ -1.25
HLA-DPA1-246ENST00000476642 IGKV4-1P06312 121 aa7.25□□□□□ -1.25
HLA-DPA1-246ENST00000476642 SEC61BP60468 96 aaKnown RBP7.25□□□□□ -1.25
HLA-DPA1-246ENST00000476642 XP32Q5T750 250 aa7.25□□□□□ -1.25
HLA-DPA1-246ENST00000476642 Q96NJ1 140 aa7.25□□□□□ -1.25
HLA-DPA1-246ENST00000476642 MUC2Q02817 5179 aa7.25□□□□□ -1.25
HLA-DPA1-246ENST00000476642 LINC00472Q9H8W2 130 aa7.24□□□□□ -1.25
HLA-DPA1-246ENST00000476642 KRTAP9-2Q9BYQ4 174 aa7.21□□□□□ -1.26
HLA-DPA1-246ENST00000476642 LINC00846Q9NV44 126 aa7.21□□□□□ -1.26
HLA-DPA1-246ENST00000476642 NREPQ16612 68 aa7.2□□□□□ -1.26
HLA-DPA1-246ENST00000476642 UBL5Q9BZL1 73 aa7.2□□□□□ -1.26
HLA-DPA1-246ENST00000476642 IGKV3D-7A0A0C4DH55 119 aa7.19□□□□□ -1.26
HLA-DPA1-246ENST00000476642 NDUFB1O75438 58 aa7.19□□□□□ -1.26
HLA-DPA1-246ENST00000476642 DEFB116Q30KQ4 102 aa7.17□□□□□ -1.26
HLA-DPA1-246ENST00000476642 LINC00313P59037 77 aa7.16□□□□□ -1.26
HLA-DPA1-246ENST00000476642 C8orf87E5RJ46 101 aa7.15□□□□□ -1.26
HLA-DPA1-246ENST00000476642 RPL37P61927 97 aaKnown RBP7.15□□□□□ -1.26
HLA-DPA1-246ENST00000476642 A0A1B0GVX0 72 aa7.14□□□□□ -1.27
HLA-DPA1-246ENST00000476642 LCE2AQ5TA79 106 aaPredicted RBP7.14□□□□□ -1.27
HLA-DPA1-246ENST00000476642 IGHV6-1A0A0B4J1U7 121 aa7.13□□□□□ -1.27
HLA-DPA1-246ENST00000476642 Q75L30 129 aa7.13□□□□□ -1.27
HLA-DPA1-246ENST00000476642 TRAV7A0A075B6U4 112 aa7.12□□□□□ -1.27
HLA-DPA1-246ENST00000476642 A8MWP4 228 aa7.12□□□□□ -1.27
HLA-DPA1-246ENST00000476642 DSCR10P59022 87 aa7.12□□□□□ -1.27
HLA-DPA1-246ENST00000476642 FAT4Q6V0I7 4981 aa7.11□□□□□ -1.27
HLA-DPA1-246ENST00000476642 MUC17Q685J3 4493 aa7.1□□□□□ -1.27
HLA-DPA1-246ENST00000476642 A0A087WVE0 104 aa7.1□□□□□ -1.27
HLA-DPA1-246ENST00000476642 NDUFC1O43677 76 aa7.1□□□□□ -1.27
HLA-DPA1-246ENST00000476642 ATP5EP56381 51 aaPredicted RBP7.1□□□□□ -1.27
HLA-DPA1-246ENST00000476642 ATP11AUNQ6ZP68 121 aa7.1□□□□□ -1.27
HLA-DPA1-246ENST00000476642 C20orf166-AS1Q96NR2 134 aa7.1□□□□□ -1.27
HLA-DPA1-246ENST00000476642 FAM236DA0A1B0GTK5 79 aa7.09□□□□□ -1.27
HLA-DPA1-246ENST00000476642 BPY2O14599 106 aa7.09□□□□□ -1.27
HLA-DPA1-246ENST00000476642 FAM236CP0DP71 79 aa7.09□□□□□ -1.27
HLA-DPA1-246ENST00000476642 CXCL6P80162 114 aa7.09□□□□□ -1.27
HLA-DPA1-246ENST00000476642 PCOTHQ58A44 107 aa7.09□□□□□ -1.27
HLA-DPA1-246ENST00000476642 Q6ZVQ6 151 aa7.09□□□□□ -1.27
HLA-DPA1-246ENST00000476642 SERP1Q9Y6X1 66 aa7.09□□□□□ -1.27
HLA-DPA1-246ENST00000476642 A8MUU9 505 aa7.08□□□□□ -1.28
HLA-DPA1-246ENST00000476642 KLKP1Q107X0 134 aa7.06□□□□□ -1.28
HLA-DPA1-246ENST00000476642 PRR15Q8IV56 129 aa7.06□□□□□ -1.28
HLA-DPA1-246ENST00000476642 KRTAP9-6A0A140TA67 174 aa7.05□□□□□ -1.28
HLA-DPA1-246ENST00000476642 KRTAP16-1A8MUX0 517 aa7.04□□□□□ -1.28
HLA-DPA1-246ENST00000476642 C20orf197Q8N268 126 aa7.04□□□□□ -1.28
HLA-DPA1-246ENST00000476642 C8orf17Q9NRJ1 99 aa7.04□□□□□ -1.28
HLA-DPA1-246ENST00000476642 NOTCH2NLQ7Z3S9 236 aa7.03□□□□□ -1.28
HLA-DPA1-246ENST00000476642 CYSTM1Q9H1C7 97 aa7.03□□□□□ -1.28
HLA-DPA1-246ENST00000476642 SMIM26A0A096LP01 95 aa7□□□□□ -1.29
HLA-DPA1-246ENST00000476642 K7EQZ3 153 aa7□□□□□ -1.29
HLA-DPA1-246ENST00000476642 H7BZZ5 65 aa6.98□□□□□ -1.29
HLA-DPA1-246ENST00000476642 Q8N9P0 234 aaPredicted RBP6.97□□□□□ -1.29
HLA-DPA1-246ENST00000476642 TMEM254Q8TBM7 123 aa6.97□□□□□ -1.29
HLA-DPA1-246ENST00000476642 MMP24-AS1A0A0U1RRL7 71 aa6.96□□□□□ -1.3
HLA-DPA1-246ENST00000476642 hDV103S1A0JD37 113 aa6.96□□□□□ -1.3
HLA-DPA1-246ENST00000476642 MRPL34Q9BQ48 92 aaKnown RBP6.96□□□□□ -1.3
HLA-DPA1-246ENST00000476642 KRTAP4-1Q9BYQ7 146 aa6.96□□□□□ -1.3
HLA-DPA1-246ENST00000476642 C4orf26Q17RF5 130 aa6.94□□□□□ -1.3
HLA-DPA1-246ENST00000476642 PRO0628Q9UI54 55 aa6.94□□□□□ -1.3
HLA-DPA1-246ENST00000476642 CASC2Q6XLA1 102 aa6.92□□□□□ -1.3
HLA-DPA1-246ENST00000476642 Q8N9L7 120 aa6.92□□□□□ -1.3
HLA-DPA1-246ENST00000476642 ZCCHC13Q8WW36 166 aaKnown RBP6.91□□□□□ -1.3
HLA-DPA1-246ENST00000476642 NDUFS5O43920 106 aa6.9□□□□□ -1.3
HLA-DPA1-246ENST00000476642 HCG22E2RYF7 251 aa6.89□□□□□ -1.31
HLA-DPA1-246ENST00000476642 WFDC13Q8IUB5 93 aa6.88□□□□□ -1.31
HLA-DPA1-246ENST00000476642 SNURFQ9Y675 71 aa6.86□□□□□ -1.31
HLA-DPA1-246ENST00000476642 COX6B2Q6YFQ2 88 aa6.83□□□□□ -1.32
HLA-DPA1-246ENST00000476642 OCR1Q9BZK8 76 aa6.82□□□□□ -1.32
HLA-DPA1-246ENST00000476642 LCE2BO14633 110 aa6.8□□□□□ -1.32
HLA-DPA1-246ENST00000476642 TP53AIP1Q9HCN2 124 aa6.8□□□□□ -1.32
HLA-DPA1-246ENST00000476642 SPINK7P58062 85 aa6.79□□□□□ -1.32
HLA-DPA1-246ENST00000476642 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
HLA-DPA1-246ENST00000476642 CRCT1Q9UGL9 99 aa6.79□□□□□ -1.32
HLA-DPA1-246ENST00000476642 KRTAP19-2Q3LHN2 52 aa6.77□□□□□ -1.33
HLA-DPA1-246ENST00000476642 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
HLA-DPA1-246ENST00000476642 HRES1P13985 223 aa6.73□□□□□ -1.33
HLA-DPA1-246ENST00000476642 MT1HP80294 61 aa6.73□□□□□ -1.33
HLA-DPA1-246ENST00000476642 C7orf65Q6ZTY9 151 aa6.73□□□□□ -1.33
HLA-DPA1-246ENST00000476642 FSIP2Q5CZC0 6907 aa6.73□□□□□ -1.33
HLA-DPA1-246ENST00000476642 Q5W150 140 aa6.71□□□□□ -1.34
HLA-DPA1-246ENST00000476642 MPLKIPQ8TAP9 179 aa6.71□□□□□ -1.34
HLA-DPA1-246ENST00000476642 BRK1Q8WUW1 75 aa6.71□□□□□ -1.34
HLA-DPA1-246ENST00000476642 V9GYY9 64 aa6.71□□□□□ -1.34
HLA-DPA1-246ENST00000476642 M0R2T5 61 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms