RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 LINC00313P59037 77 aa11.13□□□□□ -0.63
MAP1LC3A-204ENST00000476428 SMCPP49901 116 aaPredicted RBP11.12□□□□□ -0.63
MAP1LC3A-204ENST00000476428 NOTCH2NLQ7Z3S9 236 aa11.12□□□□□ -0.63
MAP1LC3A-204ENST00000476428 C20orf166-AS1Q96NR2 134 aa11.12□□□□□ -0.63
MAP1LC3A-204ENST00000476428 A8MUU9 505 aa11.11□□□□□ -0.63
MAP1LC3A-204ENST00000476428 IGHV6-1A0A0B4J1U7 121 aa11.1□□□□□ -0.63
MAP1LC3A-204ENST00000476428 K7EP34 96 aa11.1□□□□□ -0.63
MAP1LC3A-204ENST00000476428 ATP11AUNQ6ZP68 121 aa11.1□□□□□ -0.63
MAP1LC3A-204ENST00000476428 J3KT08 172 aa11.09□□□□□ -0.63
MAP1LC3A-204ENST00000476428 KRTAP16-1A8MUX0 517 aa11.07□□□□□ -0.64
MAP1LC3A-204ENST00000476428 PRO0461Q9UI25 63 aa11.07□□□□□ -0.64
MAP1LC3A-204ENST00000476428 A0A1B0GVX0 72 aa11.06□□□□□ -0.64
MAP1LC3A-204ENST00000476428 CRCT1Q9UGL9 99 aa11.06□□□□□ -0.64
MAP1LC3A-204ENST00000476428 FSIP2Q5CZC0 6907 aa11.05□□□□□ -0.64
MAP1LC3A-204ENST00000476428 NREPQ16612 68 aa11.03□□□□□ -0.64
MAP1LC3A-204ENST00000476428 LCE2DQ5TA82 110 aaPredicted RBP11.03□□□□□ -0.64
MAP1LC3A-204ENST00000476428 C8orf87E5RJ46 101 aa11.02□□□□□ -0.65
MAP1LC3A-204ENST00000476428 GTF2H5Q6ZYL4 71 aa11□□□□□ -0.65
MAP1LC3A-204ENST00000476428 NDUFB1O75438 58 aa10.99□□□□□ -0.65
MAP1LC3A-204ENST00000476428 KRTAP19-2Q3LHN2 52 aa10.99□□□□□ -0.65
MAP1LC3A-204ENST00000476428 A8MWP4 228 aa10.98□□□□□ -0.65
MAP1LC3A-204ENST00000476428 LCE2CQ5TA81 110 aa10.97□□□□□ -0.65
MAP1LC3A-204ENST00000476428 IGKV3D-7A0A0C4DH55 119 aa10.95□□□□□ -0.66
MAP1LC3A-204ENST00000476428 PRR15Q8IV56 129 aa10.91□□□□□ -0.66
MAP1LC3A-204ENST00000476428 C8orf17Q9NRJ1 99 aa10.91□□□□□ -0.66
MAP1LC3A-204ENST00000476428 F8W1H4 67 aa10.9□□□□□ -0.66
MAP1LC3A-204ENST00000476428 Q6ZVQ6 151 aa10.87□□□□□ -0.67
MAP1LC3A-204ENST00000476428 BPY2O14599 106 aa10.85□□□□□ -0.67
MAP1LC3A-204ENST00000476428 ETDBQ3ZM63 59 aa10.83□□□□□ -0.68
MAP1LC3A-204ENST00000476428 Q8N9P0 234 aaPredicted RBP10.83□□□□□ -0.68
MAP1LC3A-204ENST00000476428 K7EQZ3 153 aa10.82□□□□□ -0.68
MAP1LC3A-204ENST00000476428 LINC00846Q9NV44 126 aa10.82□□□□□ -0.68
MAP1LC3A-204ENST00000476428 MMP24-AS1A0A0U1RRL7 71 aa10.8□□□□□ -0.68
MAP1LC3A-204ENST00000476428 MT1HP80294 61 aa10.8□□□□□ -0.68
MAP1LC3A-204ENST00000476428 COX6B2Q6YFQ2 88 aa10.8□□□□□ -0.68
MAP1LC3A-204ENST00000476428 ZCCHC13Q8WW36 166 aaKnown RBP10.78□□□□□ -0.68
MAP1LC3A-204ENST00000476428 UBL5Q9BZL1 73 aa10.77□□□□□ -0.69
MAP1LC3A-204ENST00000476428 TMEM254Q8TBM7 123 aa10.76□□□□□ -0.69
MAP1LC3A-204ENST00000476428 Q8N9L7 120 aa10.74□□□□□ -0.69
MAP1LC3A-204ENST00000476428 MRPL34Q9BQ48 92 aaKnown RBP10.74□□□□□ -0.69
MAP1LC3A-204ENST00000476428 hDV103S1A0JD37 113 aa10.73□□□□□ -0.69
MAP1LC3A-204ENST00000476428 HRES1P13985 223 aa10.67□□□□□ -0.7
MAP1LC3A-204ENST00000476428 WFDC13Q8IUB5 93 aa10.65□□□□□ -0.7
MAP1LC3A-204ENST00000476428 A0A1B0GV90 55 aa10.64□□□□□ -0.71
MAP1LC3A-204ENST00000476428 SPINK7P58062 85 aa10.64□□□□□ -0.71
MAP1LC3A-204ENST00000476428 NDUFS5O43920 106 aa10.63□□□□□ -0.71
MAP1LC3A-204ENST00000476428 CASC2Q6XLA1 102 aa10.63□□□□□ -0.71
MAP1LC3A-204ENST00000476428 MPLKIPQ8TAP9 179 aa10.63□□□□□ -0.71
MAP1LC3A-204ENST00000476428 M0R2T5 61 aa10.61□□□□□ -0.71
MAP1LC3A-204ENST00000476428 FLGP20930 4061 aaPredicted RBP10.59□□□□□ -0.71
MAP1LC3A-204ENST00000476428 RBM12B-AS1Q9P1G2 102 aa10.58□□□□□ -0.72
MAP1LC3A-204ENST00000476428 FAM236DA0A1B0GTK5 79 aa10.56□□□□□ -0.72
MAP1LC3A-204ENST00000476428 FAM236CP0DP71 79 aa10.56□□□□□ -0.72
MAP1LC3A-204ENST00000476428 CXCL6P80162 114 aa10.56□□□□□ -0.72
MAP1LC3A-204ENST00000476428 HCG22E2RYF7 251 aa10.55□□□□□ -0.72
MAP1LC3A-204ENST00000476428 ACYP1P07311 99 aa10.55□□□□□ -0.72
MAP1LC3A-204ENST00000476428 KRTAP10-6P60371 365 aaPredicted RBP10.54□□□□□ -0.72
MAP1LC3A-204ENST00000476428 Q5W150 140 aa10.53□□□□□ -0.72
MAP1LC3A-204ENST00000476428 LORP23490 312 aaPredicted RBP10.52□□□□□ -0.73
MAP1LC3A-204ENST00000476428 FAM240AA0A1B0GVK7 77 aa10.51□□□□□ -0.73
MAP1LC3A-204ENST00000476428 IGKV2D-30A0A075B6S6 120 aa10.41□□□□□ -0.74
MAP1LC3A-204ENST00000476428 IGKV2-30P06310 120 aa10.41□□□□□ -0.74
MAP1LC3A-204ENST00000476428 KRTAP9-7A8MTY7 169 aa10.4□□□□□ -0.74
MAP1LC3A-204ENST00000476428 ATP5EP2Q5VTU8 51 aa10.38□□□□□ -0.75
MAP1LC3A-204ENST00000476428 C7orf65Q6ZTY9 151 aa10.37□□□□□ -0.75
MAP1LC3A-204ENST00000476428 TP53AIP1Q9HCN2 124 aa10.34□□□□□ -0.75
MAP1LC3A-204ENST00000476428 LINC00643Q86TS7 51 aa10.32□□□□□ -0.76
MAP1LC3A-204ENST00000476428 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.31□□□□□ -0.76
MAP1LC3A-204ENST00000476428 HIST1H4AP62805 103 aaKnown RBP10.3□□□□□ -0.76
MAP1LC3A-204ENST00000476428 KRTAP9-8Q9BYQ0 159 aa10.28□□□□□ -0.76
MAP1LC3A-204ENST00000476428 J3QR89 54 aa10.24□□□□□ -0.77
MAP1LC3A-204ENST00000476428 H1FX-AS1Q4G0G2 97 aa10.23□□□□□ -0.77
MAP1LC3A-204ENST00000476428 A0A087WVE0 104 aa10.21□□□□□ -0.77
MAP1LC3A-204ENST00000476428 C4orf26Q17RF5 130 aa10.21□□□□□ -0.77
MAP1LC3A-204ENST00000476428 MT2AP02795 61 aa10.15□□□□□ -0.78
MAP1LC3A-204ENST00000476428 TRAV22A0A0B4J277 110 aa10.13□□□□□ -0.79
MAP1LC3A-204ENST00000476428 UQCRQO14949 82 aa10.12□□□□□ -0.79
MAP1LC3A-204ENST00000476428 CYP4F30PQ9H0H9 118 aa10.11□□□□□ -0.79
MAP1LC3A-204ENST00000476428 KRTAP3-1Q9BYR8 98 aa10.09□□□□□ -0.79
MAP1LC3A-204ENST00000476428 MT1FP04733 61 aa10.07□□□□□ -0.8
MAP1LC3A-204ENST00000476428 LOC101927531A0A1B0GV80 90 aa10.06□□□□□ -0.8
MAP1LC3A-204ENST00000476428 C1orf64Q8NEQ6 169 aa10.06□□□□□ -0.8
MAP1LC3A-204ENST00000476428 H0Y9P7 68 aa10.04□□□□□ -0.8
MAP1LC3A-204ENST00000476428 KRTAP10-10P60014 251 aa10.03□□□□□ -0.8
MAP1LC3A-204ENST00000476428 ATOX1O00244 68 aa10.01□□□□□ -0.81
MAP1LC3A-204ENST00000476428 SSPOA2VEC9 5147 aa10□□□□□ -0.81
MAP1LC3A-204ENST00000476428 OCR1Q9BZK8 76 aa9.99□□□□□ -0.81
MAP1LC3A-204ENST00000476428 K7ERU9 68 aa9.98□□□□□ -0.81
MAP1LC3A-204ENST00000476428 USH2AO75445 5202 aa9.97□□□□□ -0.81
MAP1LC3A-204ENST00000476428 KRTAP9-3Q9BYQ3 159 aa9.95□□□□□ -0.82
MAP1LC3A-204ENST00000476428 LINC00208Q96KT6 92 aa9.92□□□□□ -0.82
MAP1LC3A-204ENST00000476428 S4R3F8 94 aa9.92□□□□□ -0.82
MAP1LC3A-204ENST00000476428 MT-ATP8P03928 68 aa9.9□□□□□ -0.82
MAP1LC3A-204ENST00000476428 SCGB1A1P11684 91 aa9.89□□□□□ -0.83
MAP1LC3A-204ENST00000476428 MP68P56378 58 aa9.89□□□□□ -0.83
MAP1LC3A-204ENST00000476428 C5orf47Q569G3 176 aa9.89□□□□□ -0.83
MAP1LC3A-204ENST00000476428 IMUPQ9GZP8 106 aa9.89□□□□□ -0.83
MAP1LC3A-204ENST00000476428 FCGBPQ9Y6R7 5405 aaPredicted RBP9.89□□□□□ -0.83
MAP1LC3A-204ENST00000476428 LCA10Q71F78 164 aa9.87□□□□□ -0.83
MAP1LC3A-204ENST00000476428 LCE2BO14633 110 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms