RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 WFDC13Q8IUB5 93 aa9.64□□□□□ -0.87
VARS2-207ENST00000476162 FRAS1Q86XX4 4008 aa9.63□□□□□ -0.87
VARS2-207ENST00000476162 ZNF706Q9Y5V0 76 aaPredicted RBP9.63□□□□□ -0.87
VARS2-207ENST00000476162 ANAPC11Q9NYG5 84 aa9.62□□□□□ -0.87
VARS2-207ENST00000476162 H3BPC8 53 aa9.62□□□□□ -0.87
VARS2-207ENST00000476162 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
VARS2-207ENST00000476162 WWC2-AS2Q96NR7 200 aa9.61□□□□□ -0.87
VARS2-207ENST00000476162 A8MWP4 228 aa9.6□□□□□ -0.87
VARS2-207ENST00000476162 KRTAP10-2P60368 255 aa9.59□□□□□ -0.87
VARS2-207ENST00000476162 H0Y9P7 68 aa9.59□□□□□ -0.87
VARS2-207ENST00000476162 MOBPQ13875 183 aa9.59□□□□□ -0.87
VARS2-207ENST00000476162 KRTAP29-1A8MX34 341 aaPredicted RBP9.58□□□□□ -0.88
VARS2-207ENST00000476162 COA5Q86WW8 74 aa9.57□□□□□ -0.88
VARS2-207ENST00000476162 DNAH6Q9C0G6 4158 aa9.56□□□□□ -0.88
VARS2-207ENST00000476162 IGLV7-43P04211 117 aa9.56□□□□□ -0.88
VARS2-207ENST00000476162 CASC2Q6XLA1 102 aa9.55□□□□□ -0.88
VARS2-207ENST00000476162 C8orf87E5RJ46 101 aa9.54□□□□□ -0.88
VARS2-207ENST00000476162 CIRBP-AS1Q8TBR5 109 aa9.54□□□□□ -0.88
VARS2-207ENST00000476162 Q96NJ1 140 aa9.54□□□□□ -0.88
VARS2-207ENST00000476162 DNAH5Q8TE73 4624 aa9.53□□□□□ -0.88
VARS2-207ENST00000476162 LINC01558Q9Y6Z2 57 aa9.52□□□□□ -0.89
VARS2-207ENST00000476162 DNAH11Q96DT5 4516 aa9.51□□□□□ -0.89
VARS2-207ENST00000476162 IGLV7-46A0A075B6I9 117 aa9.51□□□□□ -0.89
VARS2-207ENST00000476162 MMP24-AS1A0A0U1RRL7 71 aa9.48□□□□□ -0.89
VARS2-207ENST00000476162 KRTAP21-3Q3LHN1 58 aa9.48□□□□□ -0.89
VARS2-207ENST00000476162 HYDINQ4G0P3 5121 aa9.48□□□□□ -0.89
VARS2-207ENST00000476162 KRTAP10-1P60331 282 aa9.46□□□□□ -0.89
VARS2-207ENST00000476162 ALMS1Q8TCU4 4167 aa9.45□□□□□ -0.9
VARS2-207ENST00000476162 SPINK7P58062 85 aa9.44□□□□□ -0.9
VARS2-207ENST00000476162 SPAG11AQ6PDA7 123 aa9.44□□□□□ -0.9
VARS2-207ENST00000476162 Q6ZSA8 131 aa9.44□□□□□ -0.9
VARS2-207ENST00000476162 PKD1P98161 4303 aa9.42□□□□□ -0.9
VARS2-207ENST00000476162 FAT2Q9NYQ8 4349 aa9.41□□□□□ -0.9
VARS2-207ENST00000476162 IGHV6-1A0A0B4J1U7 121 aa9.4□□□□□ -0.9
VARS2-207ENST00000476162 C8orf17Q9NRJ1 99 aa9.4□□□□□ -0.9
VARS2-207ENST00000476162 A0A1B0GVX0 72 aa9.4□□□□□ -0.91
VARS2-207ENST00000476162 LINC00313P59037 77 aa9.39□□□□□ -0.91
VARS2-207ENST00000476162 ASB16-AS1Q495Z4 193 aa9.39□□□□□ -0.91
VARS2-207ENST00000476162 LRP1BQ9NZR2 4599 aa9.39□□□□□ -0.91
VARS2-207ENST00000476162 CDK2AP2O75956 126 aa9.39□□□□□ -0.91
VARS2-207ENST00000476162 SSBP3-AS1Q7Z2R9 100 aa9.36□□□□□ -0.91
VARS2-207ENST00000476162 SPINK6Q6UWN8 80 aa9.35□□□□□ -0.91
VARS2-207ENST00000476162 PCOTHQ58A44 107 aa9.35□□□□□ -0.91
VARS2-207ENST00000476162 A0A087X002 238 aa9.34□□□□□ -0.91
VARS2-207ENST00000476162 NOTCH2NLQ7Z3S9 236 aa9.34□□□□□ -0.91
VARS2-207ENST00000476162 PRAC1Q96KF2 57 aa9.33□□□□□ -0.92
VARS2-207ENST00000476162 TP53AIP1Q9HCN2 124 aa9.31□□□□□ -0.92
VARS2-207ENST00000476162 H3BS24 57 aa9.31□□□□□ -0.92
VARS2-207ENST00000476162 HRES1P13985 223 aa9.31□□□□□ -0.92
VARS2-207ENST00000476162 KRTAP13-2Q52LG2 175 aa9.31□□□□□ -0.92
VARS2-207ENST00000476162 MRPL34Q9BQ48 92 aaKnown RBP9.3□□□□□ -0.92
VARS2-207ENST00000476162 PLA2G1BP04054 148 aaKnown RBP9.29□□□□□ -0.92
VARS2-207ENST00000476162 LINC01554Q52M75 96 aa9.28□□□□□ -0.92
VARS2-207ENST00000476162 ADM2Q7Z4H4 148 aa9.27□□□□□ -0.93
VARS2-207ENST00000476162 KRTAP1-4P0C5Y4 121 aa9.25□□□□□ -0.93
VARS2-207ENST00000476162 VPS13BQ7Z7G8 4022 aa9.25□□□□□ -0.93
VARS2-207ENST00000476162 SACSQ9NZJ4 4579 aa9.23□□□□□ -0.93
VARS2-207ENST00000476162 PKHD1P08F94 4074 aa9.2□□□□□ -0.94
VARS2-207ENST00000476162 PRR26Q8N8Z3 221 aa9.16□□□□□ -0.94
VARS2-207ENST00000476162 Q5W150 140 aa9.15□□□□□ -0.95
VARS2-207ENST00000476162 TYMSOSQ8TAI1 123 aa9.12□□□□□ -0.95
VARS2-207ENST00000476162 KRTAP13-3Q3SY46 172 aa9.11□□□□□ -0.95
VARS2-207ENST00000476162 SMR3BP02814 79 aaPredicted RBP9.09□□□□□ -0.95
VARS2-207ENST00000476162 DYNC1H1Q14204 4646 aaKnown RBP9.09□□□□□ -0.95
VARS2-207ENST00000476162 SPATA8Q6RVD6 105 aa9.08□□□□□ -0.96
VARS2-207ENST00000476162 A0A1B0GVY2 172 aa9.07□□□□□ -0.96
VARS2-207ENST00000476162 SPINK1P00995 79 aa9.05□□□□□ -0.96
VARS2-207ENST00000476162 KRTAP16-1A8MUX0 517 aa9.03□□□□□ -0.96
VARS2-207ENST00000476162 RETNLBQ9BQ08 111 aa9.02□□□□□ -0.97
VARS2-207ENST00000476162 ACYP2P14621 99 aa9.01□□□□□ -0.97
VARS2-207ENST00000476162 FAM229AH3BQW9 127 aa9□□□□□ -0.97
VARS2-207ENST00000476162 CSAG1Q6PB30 78 aa8.99□□□□□ -0.97
VARS2-207ENST00000476162 LINC00304Q8N9R0 145 aa8.99□□□□□ -0.97
VARS2-207ENST00000476162 FAT1Q14517 4588 aa8.98□□□□□ -0.97
VARS2-207ENST00000476162 A0A1B0GU69 56 aa8.98□□□□□ -0.97
VARS2-207ENST00000476162 RYR2Q92736 4967 aa8.97□□□□□ -0.97
VARS2-207ENST00000476162 APOBP04114 4563 aaKnown RBP8.97□□□□□ -0.97
VARS2-207ENST00000476162 KRTAP10-4P60372 401 aaPredicted RBP8.96□□□□□ -0.98
VARS2-207ENST00000476162 MIR22HGQ0VDD5 57 aa8.96□□□□□ -0.98
VARS2-207ENST00000476162 KMT2CQ8NEZ4 4911 aaKnown RBP8.94□□□□□ -0.98
VARS2-207ENST00000476162 RPS29P62273 56 aaKnown RBP8.93□□□□□ -0.98
VARS2-207ENST00000476162 UQCR11O14957 56 aa8.92□□□□□ -0.98
VARS2-207ENST00000476162 IGKV2-30P06310 120 aa8.92□□□□□ -0.98
VARS2-207ENST00000476162 DMAC1Q96GE9 116 aa8.92□□□□□ -0.98
VARS2-207ENST00000476162 IGKV2D-30A0A075B6S6 120 aa8.84□□□□□ -0.99
VARS2-207ENST00000476162 PKHD1L1Q86WI1 4243 aa8.8□□□□□ -1
VARS2-207ENST00000476162 C9orf92A6NGG3 77 aa8.77□□□□□ -1.01
VARS2-207ENST00000476162 ROMO1P60602 79 aa8.7□□□□□ -1.02
VARS2-207ENST00000476162 C20orf166-AS1Q96NR2 134 aa8.69□□□□□ -1.02
VARS2-207ENST00000476162 A8MUU9 505 aa8.68□□□□□ -1.02
VARS2-207ENST00000476162 KRTAP25-1Q3LHN0 102 aa8.67□□□□□ -1.02
VARS2-207ENST00000476162 FLG2Q5D862 2391 aaPredicted RBP8.67□□□□□ -1.02
VARS2-207ENST00000476162 RYR3Q15413 4870 aa8.66□□□□□ -1.02
VARS2-207ENST00000476162 Q8N1X5 172 aa8.66□□□□□ -1.02
VARS2-207ENST00000476162 Q5VSD8 79 aa8.65□□□□□ -1.02
VARS2-207ENST00000476162 LRP1Q07954 4544 aaKnown RBP8.65□□□□□ -1.03
VARS2-207ENST00000476162 HSPG2P98160 4391 aa8.64□□□□□ -1.03
VARS2-207ENST00000476162 KRTAP10-8P60410 259 aa8.61□□□□□ -1.03
VARS2-207ENST00000476162 TNXBP22105 4242 aa8.58□□□□□ -1.04
VARS2-207ENST00000476162 RYR1P21817 5038 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms