RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 RPL37P61927 97 aaKnown RBP9.11□□□□□ -0.95
SCAF11-206ENST00000474828 KRTAP4-1Q9BYQ7 146 aa9.09□□□□□ -0.95
SCAF11-206ENST00000474828 IGKV4-1P06312 121 aa9.08□□□□□ -0.96
SCAF11-206ENST00000474828 Q75L30 129 aa9.07□□□□□ -0.96
SCAF11-206ENST00000474828 J3KT08 172 aa9.06□□□□□ -0.96
SCAF11-206ENST00000474828 GTF2H5Q6ZYL4 71 aa9.06□□□□□ -0.96
SCAF11-206ENST00000474828 C20orf166-AS1Q96NR2 134 aa9.05□□□□□ -0.96
SCAF11-206ENST00000474828 DEFB116Q30KQ4 102 aa9.04□□□□□ -0.96
SCAF11-206ENST00000474828 SIGMAR1Q99720 223 aa9.04□□□□□ -0.96
SCAF11-206ENST00000474828 PCOTHQ58A44 107 aa9.03□□□□□ -0.96
SCAF11-206ENST00000474828 A8MUU9 505 aa9.02□□□□□ -0.97
SCAF11-206ENST00000474828 KRTAP16-1A8MUX0 517 aa9.02□□□□□ -0.97
SCAF11-206ENST00000474828 F8W1H4 67 aa9.01□□□□□ -0.97
SCAF11-206ENST00000474828 KRTAP9-2Q9BYQ4 174 aa9.01□□□□□ -0.97
SCAF11-206ENST00000474828 FAT4Q6V0I7 4981 aa9□□□□□ -0.97
SCAF11-206ENST00000474828 LINC00313P59037 77 aa9□□□□□ -0.97
SCAF11-206ENST00000474828 A0A1B0GVX0 72 aa8.99□□□□□ -0.97
SCAF11-206ENST00000474828 DSCR10P59022 87 aa8.99□□□□□ -0.97
SCAF11-206ENST00000474828 NOTCH2NLQ7Z3S9 236 aa8.98□□□□□ -0.97
SCAF11-206ENST00000474828 C8orf87E5RJ46 101 aa8.97□□□□□ -0.97
SCAF11-206ENST00000474828 NREPQ16612 68 aa8.96□□□□□ -0.98
SCAF11-206ENST00000474828 A8MWP4 228 aa8.95□□□□□ -0.98
SCAF11-206ENST00000474828 IGHV6-1A0A0B4J1U7 121 aa8.94□□□□□ -0.98
SCAF11-206ENST00000474828 IGKV3D-7A0A0C4DH55 119 aa8.92□□□□□ -0.98
SCAF11-206ENST00000474828 NDUFB1O75438 58 aa8.91□□□□□ -0.98
SCAF11-206ENST00000474828 ATP11AUNQ6ZP68 121 aa8.91□□□□□ -0.98
SCAF11-206ENST00000474828 KRTAP19-2Q3LHN2 52 aa8.9□□□□□ -0.98
SCAF11-206ENST00000474828 ETDBQ3ZM63 59 aa8.89□□□□□ -0.99
SCAF11-206ENST00000474828 PRR15Q8IV56 129 aa8.89□□□□□ -0.99
SCAF11-206ENST00000474828 Q6ZVQ6 151 aa8.88□□□□□ -0.99
SCAF11-206ENST00000474828 Q8N9P0 234 aaPredicted RBP8.86□□□□□ -0.99
SCAF11-206ENST00000474828 C8orf17Q9NRJ1 99 aa8.86□□□□□ -0.99
SCAF11-206ENST00000474828 LINC00846Q9NV44 126 aa8.86□□□□□ -0.99
SCAF11-206ENST00000474828 BPY2O14599 106 aa8.82□□□□□ -1
SCAF11-206ENST00000474828 K7EQZ3 153 aa8.81□□□□□ -1
SCAF11-206ENST00000474828 MMP24-AS1A0A0U1RRL7 71 aa8.8□□□□□ -1
SCAF11-206ENST00000474828 KRTAP9-6A0A140TA67 174 aa8.79□□□□□ -1
SCAF11-206ENST00000474828 UBL5Q9BZL1 73 aa8.79□□□□□ -1
SCAF11-206ENST00000474828 A0A1B0GV90 55 aa8.77□□□□□ -1.01
SCAF11-206ENST00000474828 TMEM254Q8TBM7 123 aa8.77□□□□□ -1.01
SCAF11-206ENST00000474828 FAM240AA0A1B0GVK7 77 aa8.74□□□□□ -1.01
SCAF11-206ENST00000474828 ZCCHC13Q8WW36 166 aaKnown RBP8.73□□□□□ -1.01
SCAF11-206ENST00000474828 MRPL34Q9BQ48 92 aaKnown RBP8.73□□□□□ -1.01
SCAF11-206ENST00000474828 ACYP1P07311 99 aa8.72□□□□□ -1.01
SCAF11-206ENST00000474828 hDV103S1A0JD37 113 aa8.71□□□□□ -1.02
SCAF11-206ENST00000474828 CXCL6P80162 114 aa8.7□□□□□ -1.02
SCAF11-206ENST00000474828 Q8N9L7 120 aa8.7□□□□□ -1.02
SCAF11-206ENST00000474828 MPLKIPQ8TAP9 179 aa8.67□□□□□ -1.02
SCAF11-206ENST00000474828 FLGP20930 4061 aaPredicted RBP8.66□□□□□ -1.02
SCAF11-206ENST00000474828 MT1HP80294 61 aa8.66□□□□□ -1.02
SCAF11-206ENST00000474828 HRES1P13985 223 aa8.64□□□□□ -1.03
SCAF11-206ENST00000474828 CASC2Q6XLA1 102 aa8.63□□□□□ -1.03
SCAF11-206ENST00000474828 HCG22E2RYF7 251 aa8.6□□□□□ -1.03
SCAF11-206ENST00000474828 WFDC13Q8IUB5 93 aa8.59□□□□□ -1.03
SCAF11-206ENST00000474828 SPINK7P58062 85 aa8.58□□□□□ -1.04
SCAF11-206ENST00000474828 ATP5EP2Q5VTU8 51 aa8.57□□□□□ -1.04
SCAF11-206ENST00000474828 COX6B2Q6YFQ2 88 aa8.57□□□□□ -1.04
SCAF11-206ENST00000474828 KRTAP4-8Q9BYQ9 185 aa8.56□□□□□ -1.04
SCAF11-206ENST00000474828 Q5W150 140 aa8.55□□□□□ -1.04
SCAF11-206ENST00000474828 NDUFS5O43920 106 aa8.53□□□□□ -1.04
SCAF11-206ENST00000474828 LINC00643Q86TS7 51 aa8.52□□□□□ -1.05
SCAF11-206ENST00000474828 RBM12B-AS1Q9P1G2 102 aa8.5□□□□□ -1.05
SCAF11-206ENST00000474828 TP53AIP1Q9HCN2 124 aa8.47□□□□□ -1.05
SCAF11-206ENST00000474828 CRCT1Q9UGL9 99 aa8.47□□□□□ -1.05
SCAF11-206ENST00000474828 J3QR89 54 aa8.46□□□□□ -1.06
SCAF11-206ENST00000474828 KRTAP10-6P60371 365 aaPredicted RBP8.45□□□□□ -1.06
SCAF11-206ENST00000474828 C7orf65Q6ZTY9 151 aa8.42□□□□□ -1.06
SCAF11-206ENST00000474828 FSIP2Q5CZC0 6907 aa8.39□□□□□ -1.07
SCAF11-206ENST00000474828 FAM236DA0A1B0GTK5 79 aa8.38□□□□□ -1.07
SCAF11-206ENST00000474828 FAM236CP0DP71 79 aa8.38□□□□□ -1.07
SCAF11-206ENST00000474828 M0R2T5 61 aa8.37□□□□□ -1.07
SCAF11-206ENST00000474828 HIST1H4AP62805 103 aaKnown RBP8.37□□□□□ -1.07
SCAF11-206ENST00000474828 IGKV2D-30A0A075B6S6 120 aa8.36□□□□□ -1.07
SCAF11-206ENST00000474828 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.36□□□□□ -1.07
SCAF11-206ENST00000474828 IGKV2-30P06310 120 aa8.36□□□□□ -1.07
SCAF11-206ENST00000474828 A0A087WVE0 104 aa8.33□□□□□ -1.08
SCAF11-206ENST00000474828 KRTAP4-12Q9BQ66 201 aa8.31□□□□□ -1.08
SCAF11-206ENST00000474828 K7ERU9 68 aa8.29□□□□□ -1.08
SCAF11-206ENST00000474828 KRTAP9-8Q9BYQ0 159 aa8.29□□□□□ -1.08
SCAF11-206ENST00000474828 TRAV22A0A0B4J277 110 aa8.28□□□□□ -1.08
SCAF11-206ENST00000474828 UQCRQO14949 82 aa8.28□□□□□ -1.08
SCAF11-206ENST00000474828 H3BS24 57 aa8.26□□□□□ -1.09
SCAF11-206ENST00000474828 H1FX-AS1Q4G0G2 97 aa8.26□□□□□ -1.09
SCAF11-206ENST00000474828 CYP4F30PQ9H0H9 118 aa8.25□□□□□ -1.09
SCAF11-206ENST00000474828 KRTAP19-1Q8IUB9 90 aa8.24□□□□□ -1.09
SCAF11-206ENST00000474828 OCR1Q9BZK8 76 aa8.24□□□□□ -1.09
SCAF11-206ENST00000474828 IMUPQ9GZP8 106 aa8.24□□□□□ -1.09
SCAF11-206ENST00000474828 C4orf26Q17RF5 130 aa8.23□□□□□ -1.09
SCAF11-206ENST00000474828 LOC101927531A0A1B0GV80 90 aa8.22□□□□□ -1.09
SCAF11-206ENST00000474828 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
SCAF11-206ENST00000474828 ATOX1O00244 68 aa8.2□□□□□ -1.1
SCAF11-206ENST00000474828 H0Y9P7 68 aa8.17□□□□□ -1.1
SCAF11-206ENST00000474828 MT2AP02795 61 aa8.16□□□□□ -1.1
SCAF11-206ENST00000474828 MT-ATP8P03928 68 aa8.15□□□□□ -1.1
SCAF11-206ENST00000474828 LCE3BQ5TA77 95 aa8.14□□□□□ -1.11
SCAF11-206ENST00000474828 C1orf64Q8NEQ6 169 aa8.13□□□□□ -1.11
SCAF11-206ENST00000474828 C5orf47Q569G3 176 aa8.11□□□□□ -1.11
SCAF11-206ENST00000474828 MT1FP04733 61 aa8.09□□□□□ -1.11
SCAF11-206ENST00000474828 H3BPC8 53 aa8.07□□□□□ -1.12
SCAF11-206ENST00000474828 MP68P56378 58 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms