RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 HIGD1BQ9P298 99 aa3.66□□□□□ -1.82
VPS50-211ENST00000474412 OCIAD2Q56VL3 154 aa3.65□□□□□ -1.83
VPS50-211ENST00000474412 BVES-AS1Q5T3Y7 98 aa3.65□□□□□ -1.83
VPS50-211ENST00000474412 RAB37Q96AX2 223 aa3.65□□□□□ -1.83
VPS50-211ENST00000474412 A0A1B0GV72 72 aa3.64□□□□□ -1.83
VPS50-211ENST00000474412 K7ERJ3 54 aa3.64□□□□□ -1.83
VPS50-211ENST00000474412 TCL1BO95988 128 aa3.64□□□□□ -1.83
VPS50-211ENST00000474412 PYY3Q5JQD4 70 aa3.64□□□□□ -1.83
VPS50-211ENST00000474412 Q6JHZ5 121 aa3.64□□□□□ -1.83
VPS50-211ENST00000474412 CEND1Q8N111 149 aa3.64□□□□□ -1.83
VPS50-211ENST00000474412 OBSCN-AS1Q96MR7 158 aa3.63□□□□□ -1.83
VPS50-211ENST00000474412 Q96NJ1 140 aa3.63□□□□□ -1.83
VPS50-211ENST00000474412 FLGP20930 4061 aaPredicted RBP3.63□□□□□ -1.83
VPS50-211ENST00000474412 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
VPS50-211ENST00000474412 PPDPFLQ8WWR9 84 aa3.62□□□□□ -1.83
VPS50-211ENST00000474412 A0A087WSZ3 146 aa3.61□□□□□ -1.83
VPS50-211ENST00000474412 SNHG12Q9BXW3 62 aa3.61□□□□□ -1.83
VPS50-211ENST00000474412 PRO0461Q9UI25 63 aa3.61□□□□□ -1.83
VPS50-211ENST00000474412 A0A1W2PNM2 257 aa3.6□□□□□ -1.83
VPS50-211ENST00000474412 PRO1854Q9UHT4 67 aa3.6□□□□□ -1.83
VPS50-211ENST00000474412 H0YGX0 51 aa3.59□□□□□ -1.83
VPS50-211ENST00000474412 LST1O00453 97 aa3.59□□□□□ -1.83
VPS50-211ENST00000474412 Q6Q795 121 aa3.59□□□□□ -1.83
VPS50-211ENST00000474412 H3BMG7 143 aa3.58□□□□□ -1.84
VPS50-211ENST00000474412 FABP2P12104 132 aa3.58□□□□□ -1.84
VPS50-211ENST00000474412 HSD52Q0P140 79 aa3.58□□□□□ -1.84
VPS50-211ENST00000474412 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
VPS50-211ENST00000474412 COX6B2Q6YFQ2 88 aa3.57□□□□□ -1.84
VPS50-211ENST00000474412 TEN1Q86WV5 123 aa3.57□□□□□ -1.84
VPS50-211ENST00000474412 SIGMAR1Q99720 223 aa3.57□□□□□ -1.84
VPS50-211ENST00000474412 SS18L2Q9UHA2 77 aa3.57□□□□□ -1.84
VPS50-211ENST00000474412 A0A1B0GX51 115 aa3.56□□□□□ -1.84
VPS50-211ENST00000474412 C20orf166-AS1Q96NR2 134 aa3.56□□□□□ -1.84
VPS50-211ENST00000474412 A8MUU9 505 aa3.55□□□□□ -1.84
VPS50-211ENST00000474412 PSMB2P49721 201 aa3.55□□□□□ -1.84
VPS50-211ENST00000474412 DEFB116Q30KQ4 102 aa3.55□□□□□ -1.84
VPS50-211ENST00000474412 ORMDL1Q9P0S3 153 aa3.55□□□□□ -1.84
VPS50-211ENST00000474412 M0R2T5 61 aa3.54□□□□□ -1.84
VPS50-211ENST00000474412 DNAL4O96015 105 aa3.54□□□□□ -1.84
VPS50-211ENST00000474412 SMIM6P0DI80 62 aa3.54□□□□□ -1.84
VPS50-211ENST00000474412 CRCT1Q9UGL9 99 aa3.54□□□□□ -1.84
VPS50-211ENST00000474412 FSIP2Q5CZC0 6907 aa3.53□□□□□ -1.84
VPS50-211ENST00000474412 ATP11AUNQ6ZP68 121 aa3.53□□□□□ -1.84
VPS50-211ENST00000474412 NAA38Q9BRA0 125 aaKnown RBP3.53□□□□□ -1.84
VPS50-211ENST00000474412 UQCR10Q9UDW1 63 aa3.53□□□□□ -1.84
VPS50-211ENST00000474412 SNCGO76070 127 aa3.52□□□□□ -1.85
VPS50-211ENST00000474412 CCKP06307 115 aa3.52□□□□□ -1.85
VPS50-211ENST00000474412 IGKV4-1P06312 121 aa3.52□□□□□ -1.85
VPS50-211ENST00000474412 ANKRD29Q8N6D5 301 aa3.52□□□□□ -1.85
VPS50-211ENST00000474412 TRBV7-4A0A0J9YYF1 115 aa3.51□□□□□ -1.85
VPS50-211ENST00000474412 VPS25Q9BRG1 176 aa3.51□□□□□ -1.85
VPS50-211ENST00000474412 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
VPS50-211ENST00000474412 LINC00472Q9H8W2 130 aa3.51□□□□□ -1.85
VPS50-211ENST00000474412 TRACP01848 142 aa3.5□□□□□ -1.85
VPS50-211ENST00000474412 IGHV6-1A0A0B4J1U7 121 aa3.49□□□□□ -1.85
VPS50-211ENST00000474412 A0A1B0GV90 55 aa3.48□□□□□ -1.85
VPS50-211ENST00000474412 TMEM256-PLSCR3K7ERE1 68 aa3.48□□□□□ -1.85
VPS50-211ENST00000474412 COX6CP09669 75 aa3.48□□□□□ -1.85
VPS50-211ENST00000474412 HRES1P13985 223 aa3.48□□□□□ -1.85
VPS50-211ENST00000474412 LINC00313P59037 77 aa3.48□□□□□ -1.85
VPS50-211ENST00000474412 CXCL6P80162 114 aa3.48□□□□□ -1.85
VPS50-211ENST00000474412 A0A1B0GVX0 72 aa3.46□□□□□ -1.86
VPS50-211ENST00000474412 SCGB1C2P0DMR2 95 aa3.46□□□□□ -1.86
VPS50-211ENST00000474412 BAALC-AS2P0C853 105 aa3.45□□□□□ -1.86
VPS50-211ENST00000474412 RBM3P98179 157 aaKnown RBP3.45□□□□□ -1.86
VPS50-211ENST00000474412 H3BQ85 93 aa3.44□□□□□ -1.86
VPS50-211ENST00000474412 MT2AP02795 61 aa3.44□□□□□ -1.86
VPS50-211ENST00000474412 Q6ZQT0 140 aa3.44□□□□□ -1.86
VPS50-211ENST00000474412 DSCR8Q96T75 97 aa3.44□□□□□ -1.86
VPS50-211ENST00000474412 C14orf132Q9NPU4 83 aa3.44□□□□□ -1.86
VPS50-211ENST00000474412 TRBV20-1A0A075B6N2 111 aa3.43□□□□□ -1.86
VPS50-211ENST00000474412 FAM236DA0A1B0GTK5 79 aa3.43□□□□□ -1.86
VPS50-211ENST00000474412 M0R143 59 aa3.43□□□□□ -1.86
VPS50-211ENST00000474412 FAM236CP0DP71 79 aa3.43□□□□□ -1.86
VPS50-211ENST00000474412 MTURNQ8N3F0 131 aa3.43□□□□□ -1.86
VPS50-211ENST00000474412 C9JAW5 83 aa3.42□□□□□ -1.86
VPS50-211ENST00000474412 C8orf87E5RJ46 101 aa3.42□□□□□ -1.86
VPS50-211ENST00000474412 MT1FP04733 61 aa3.42□□□□□ -1.86
VPS50-211ENST00000474412 ATXN8Q156A1 80 aa3.42□□□□□ -1.86
VPS50-211ENST00000474412 BATFQ16520 125 aa3.42□□□□□ -1.86
VPS50-211ENST00000474412 ZCCHC13Q8WW36 166 aaKnown RBP3.41□□□□□ -1.86
VPS50-211ENST00000474412 LOC110117498A0A087WWA1 95 aa3.4□□□□□ -1.87
VPS50-211ENST00000474412 IGKV3D-7A0A0C4DH55 119 aa3.4□□□□□ -1.87
VPS50-211ENST00000474412 TSTD3H0UI37 97 aa3.4□□□□□ -1.87
VPS50-211ENST00000474412 C8orf17Q9NRJ1 99 aa3.4□□□□□ -1.87
VPS50-211ENST00000474412 MMP24-AS1A0A0U1RRL7 71 aa3.38□□□□□ -1.87
VPS50-211ENST00000474412 A8MWP4 228 aa3.38□□□□□ -1.87
VPS50-211ENST00000474412 JMJD7-PLA2G4BH0Y9G9 81 aa3.38□□□□□ -1.87
VPS50-211ENST00000474412 J3KT08 172 aa3.38□□□□□ -1.87
VPS50-211ENST00000474412 WFDC13Q8IUB5 93 aa3.38□□□□□ -1.87
VPS50-211ENST00000474412 RBM12B-AS1Q9P1G2 102 aa3.38□□□□□ -1.87
VPS50-211ENST00000474412 K7EQZ3 153 aa3.37□□□□□ -1.87
VPS50-211ENST00000474412 TAX1BP3O14907 124 aa3.37□□□□□ -1.87
VPS50-211ENST00000474412 SPINK7P58062 85 aa3.37□□□□□ -1.87
VPS50-211ENST00000474412 USH2AO75445 5202 aa3.36□□□□□ -1.87
VPS50-211ENST00000474412 SSPOA2VEC9 5147 aa3.35□□□□□ -1.87
VPS50-211ENST00000474412 NDUFB1O75438 58 aa3.35□□□□□ -1.87
VPS50-211ENST00000474412 LYRM7Q5U5X0 104 aa3.35□□□□□ -1.87
VPS50-211ENST00000474412 PRR15Q8IV56 129 aa3.35□□□□□ -1.87
VPS50-211ENST00000474412 A0A1W2PPM0 123 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms