RNA–Protein interactions for RNA: ENST00000474391.1

COL4A1-203, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 2

Gene COL4A1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-203ENST00000474391 A0A1B0GV72 72 aa5.49□□□□□ -1.53
COL4A1-203ENST00000474391 CCKP06307 115 aa5.49□□□□□ -1.53
COL4A1-203ENST00000474391 LCE2DQ5TA82 110 aaPredicted RBP5.49□□□□□ -1.53
COL4A1-203ENST00000474391 LINC00472Q9H8W2 130 aa5.48□□□□□ -1.53
COL4A1-203ENST00000474391 IGKV4-1P06312 121 aa5.47□□□□□ -1.53
COL4A1-203ENST00000474391 PCP4P48539 62 aa5.47□□□□□ -1.53
COL4A1-203ENST00000474391 DSCR10P59022 87 aa5.47□□□□□ -1.53
COL4A1-203ENST00000474391 RBM3P98179 157 aaKnown RBP5.47□□□□□ -1.53
COL4A1-203ENST00000474391 SIGMAR1Q99720 223 aa5.47□□□□□ -1.53
COL4A1-203ENST00000474391 PDE6GP18545 87 aa5.46□□□□□ -1.54
COL4A1-203ENST00000474391 COX6B2Q6YFQ2 88 aa5.46□□□□□ -1.54
COL4A1-203ENST00000474391 LOC110117498A0A087WWA1 95 aa5.45□□□□□ -1.54
COL4A1-203ENST00000474391 KRTAP16-1A8MUX0 517 aa5.45□□□□□ -1.54
COL4A1-203ENST00000474391 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
COL4A1-203ENST00000474391 LINC00313P59037 77 aa5.45□□□□□ -1.54
COL4A1-203ENST00000474391 FAM240AA0A1B0GVK7 77 aa5.44□□□□□ -1.54
COL4A1-203ENST00000474391 KRTAP10-6P60371 365 aaPredicted RBP5.44□□□□□ -1.54
COL4A1-203ENST00000474391 DSCR8Q96T75 97 aa5.44□□□□□ -1.54
COL4A1-203ENST00000474391 A0A1B0GW54 56 aa5.43□□□□□ -1.54
COL4A1-203ENST00000474391 DEFB116Q30KQ4 102 aa5.43□□□□□ -1.54
COL4A1-203ENST00000474391 NOTCH2NLQ7Z3S9 236 aa5.43□□□□□ -1.54
COL4A1-203ENST00000474391 FLGP20930 4061 aaPredicted RBP5.43□□□□□ -1.54
COL4A1-203ENST00000474391 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
COL4A1-203ENST00000474391 ACYP1P07311 99 aa5.41□□□□□ -1.54
COL4A1-203ENST00000474391 Q6ZQT0 140 aa5.41□□□□□ -1.54
COL4A1-203ENST00000474391 M0R2T5 61 aa5.4□□□□□ -1.54
COL4A1-203ENST00000474391 FSIP2Q5CZC0 6907 aa5.39□□□□□ -1.55
COL4A1-203ENST00000474391 IGHV6-1A0A0B4J1U7 121 aa5.39□□□□□ -1.55
COL4A1-203ENST00000474391 A0A1B0GVX0 72 aa5.39□□□□□ -1.55
COL4A1-203ENST00000474391 C14orf132Q9NPU4 83 aa5.39□□□□□ -1.55
COL4A1-203ENST00000474391 C8orf87E5RJ46 101 aa5.38□□□□□ -1.55
COL4A1-203ENST00000474391 J3KT08 172 aa5.38□□□□□ -1.55
COL4A1-203ENST00000474391 SCGB1A1P11684 91 aa5.35□□□□□ -1.55
COL4A1-203ENST00000474391 MPLKIPQ8TAP9 179 aa5.33□□□□□ -1.56
COL4A1-203ENST00000474391 A8MWP4 228 aa5.31□□□□□ -1.56
COL4A1-203ENST00000474391 NDUFB1O75438 58 aa5.31□□□□□ -1.56
COL4A1-203ENST00000474391 HRES1P13985 223 aa5.31□□□□□ -1.56
COL4A1-203ENST00000474391 Q8N9P0 234 aaPredicted RBP5.31□□□□□ -1.56
COL4A1-203ENST00000474391 CRCT1Q9UGL9 99 aa5.31□□□□□ -1.56
COL4A1-203ENST00000474391 LINC00846Q9NV44 126 aa5.3□□□□□ -1.56
COL4A1-203ENST00000474391 IGKV3D-7A0A0C4DH55 119 aa5.29□□□□□ -1.56
COL4A1-203ENST00000474391 ZCCHC13Q8WW36 166 aaKnown RBP5.29□□□□□ -1.56
COL4A1-203ENST00000474391 ATP5EP2Q5VTU8 51 aa5.28□□□□□ -1.56
COL4A1-203ENST00000474391 LINC00643Q86TS7 51 aa5.28□□□□□ -1.56
COL4A1-203ENST00000474391 UBL5Q9BZL1 73 aa5.28□□□□□ -1.56
COL4A1-203ENST00000474391 C8orf17Q9NRJ1 99 aa5.28□□□□□ -1.56
COL4A1-203ENST00000474391 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
COL4A1-203ENST00000474391 RBM12B-AS1Q9P1G2 102 aa5.27□□□□□ -1.57
COL4A1-203ENST00000474391 NREPQ16612 68 aa5.26□□□□□ -1.57
COL4A1-203ENST00000474391 Q6ZVQ6 151 aa5.26□□□□□ -1.57
COL4A1-203ENST00000474391 PRR15Q8IV56 129 aa5.26□□□□□ -1.57
COL4A1-203ENST00000474391 FAM236DA0A1B0GTK5 79 aa5.25□□□□□ -1.57
COL4A1-203ENST00000474391 FAM236CP0DP71 79 aa5.25□□□□□ -1.57
COL4A1-203ENST00000474391 SPINK7P58062 85 aa5.24□□□□□ -1.57
COL4A1-203ENST00000474391 CXCL6P80162 114 aa5.24□□□□□ -1.57
COL4A1-203ENST00000474391 IMUPQ9GZP8 106 aa5.24□□□□□ -1.57
COL4A1-203ENST00000474391 MMP24-AS1A0A0U1RRL7 71 aa5.22□□□□□ -1.57
COL4A1-203ENST00000474391 TMEM254Q8TBM7 123 aa5.21□□□□□ -1.58
COL4A1-203ENST00000474391 K7EQZ3 153 aa5.2□□□□□ -1.58
COL4A1-203ENST00000474391 MRPL34Q9BQ48 92 aaKnown RBP5.2□□□□□ -1.58
COL4A1-203ENST00000474391 MT2AP02795 61 aa5.19□□□□□ -1.58
COL4A1-203ENST00000474391 MT-ATP8P03928 68 aa5.19□□□□□ -1.58
COL4A1-203ENST00000474391 ANAPC13Q9BS18 74 aa5.18□□□□□ -1.58
COL4A1-203ENST00000474391 hDV103S1A0JD37 113 aa5.17□□□□□ -1.58
COL4A1-203ENST00000474391 BPY2O14599 106 aa5.17□□□□□ -1.58
COL4A1-203ENST00000474391 WFDC13Q8IUB5 93 aa5.15□□□□□ -1.59
COL4A1-203ENST00000474391 MT1FP04733 61 aa5.14□□□□□ -1.59
COL4A1-203ENST00000474391 NDUFS5O43920 106 aa5.11□□□□□ -1.59
COL4A1-203ENST00000474391 HIST1H4AP62805 103 aaKnown RBP5.11□□□□□ -1.59
COL4A1-203ENST00000474391 Q8N9L7 120 aa5.11□□□□□ -1.59
COL4A1-203ENST00000474391 Q5W150 140 aa5.1□□□□□ -1.59
COL4A1-203ENST00000474391 CASC2Q6XLA1 102 aa5.1□□□□□ -1.59
COL4A1-203ENST00000474391 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
COL4A1-203ENST00000474391 KRTAP10-10P60014 251 aa5.09□□□□□ -1.59
COL4A1-203ENST00000474391 USH2AO75445 5202 aa5.08□□□□□ -1.6
COL4A1-203ENST00000474391 FAM236AA0A1B0GUQ0 79 aa5.08□□□□□ -1.6
COL4A1-203ENST00000474391 FAM236BA0A1B0GV22 79 aa5.08□□□□□ -1.6
COL4A1-203ENST00000474391 ATOX1O00244 68 aa5.08□□□□□ -1.6
COL4A1-203ENST00000474391 LCE2BO14633 110 aa5.07□□□□□ -1.6
COL4A1-203ENST00000474391 A0A087WVE0 104 aa5.06□□□□□ -1.6
COL4A1-203ENST00000474391 HCG22E2RYF7 251 aa5.06□□□□□ -1.6
COL4A1-203ENST00000474391 C7orf65Q6ZTY9 151 aa5.06□□□□□ -1.6
COL4A1-203ENST00000474391 IGKV2D-30A0A075B6S6 120 aa5.05□□□□□ -1.6
COL4A1-203ENST00000474391 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
COL4A1-203ENST00000474391 H1FX-AS1Q4G0G2 97 aa5.05□□□□□ -1.6
COL4A1-203ENST00000474391 SMIM20Q8N5G0 67 aa5.03□□□□□ -1.6
COL4A1-203ENST00000474391 SVIPQ8NHG7 77 aa5.03□□□□□ -1.6
COL4A1-203ENST00000474391 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
COL4A1-203ENST00000474391 UQCRQO14949 82 aa5.01□□□□□ -1.61
COL4A1-203ENST00000474391 C4orf26Q17RF5 130 aa4.98□□□□□ -1.61
COL4A1-203ENST00000474391 OCR1Q9BZK8 76 aa4.98□□□□□ -1.61
COL4A1-203ENST00000474391 TRAV7A0A075B6U4 112 aa4.97□□□□□ -1.61
COL4A1-203ENST00000474391 COX7CP15954 63 aa4.97□□□□□ -1.61
COL4A1-203ENST00000474391 TP53AIP1Q9HCN2 124 aa4.97□□□□□ -1.61
COL4A1-203ENST00000474391 KRTAP19-1Q8IUB9 90 aa4.96□□□□□ -1.62
COL4A1-203ENST00000474391 SERP2Q8N6R1 65 aa4.96□□□□□ -1.62
COL4A1-203ENST00000474391 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
COL4A1-203ENST00000474391 CCDC179H3BU77 68 aa4.94□□□□□ -1.62
COL4A1-203ENST00000474391 KRTAP3-1Q9BYR8 98 aa4.94□□□□□ -1.62
COL4A1-203ENST00000474391 FCGBPQ9Y6R7 5405 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms