RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 C20orf78Q9BR46 151 aa-1.47□□□□□ -2.64
ECHDC1-213ENST00000474240 DOT1LQ8TEK3 1739 aa-1.48□□□□□ -2.65
ECHDC1-213ENST00000474240 IAPPP10997 89 aa-1.48□□□□□ -2.65
ECHDC1-213ENST00000474240 DEFB106AQ8N104 65 aa-1.48□□□□□ -2.65
ECHDC1-213ENST00000474240 THOC2Q8NI27 1593 aaKnown RBP-1.48□□□□□ -2.65
ECHDC1-213ENST00000474240 FREM2Q5SZK8 3169 aa-1.49□□□□□ -2.65
ECHDC1-213ENST00000474240 CCDC88BA6NC98 1476 aa-1.49□□□□□ -2.65
ECHDC1-213ENST00000474240 EP400Q96L91 3159 aa-1.49□□□□□ -2.65
ECHDC1-213ENST00000474240 LCE6AA0A183 80 aa-1.49□□□□□ -2.65
ECHDC1-213ENST00000474240 S100A8P05109 93 aa-1.49□□□□□ -2.65
ECHDC1-213ENST00000474240 RABAC1Q9UI14 185 aa-1.49□□□□□ -2.65
ECHDC1-213ENST00000474240 DDX60LQ5H9U9 1706 aaKnown RBP-1.49□□□□□ -2.65
ECHDC1-213ENST00000474240 ABCC10Q5T3U5 1492 aa-1.5□□□□□ -2.65
ECHDC1-213ENST00000474240 LYNX1G3V0Z9 82 aa-1.5□□□□□ -2.65
ECHDC1-213ENST00000474240 SMR3BP02814 79 aaPredicted RBP-1.5□□□□□ -2.65
ECHDC1-213ENST00000474240 LINC00643Q86TS7 51 aa-1.5□□□□□ -2.65
ECHDC1-213ENST00000474240 Q9H521 79 aa-1.5□□□□□ -2.65
ECHDC1-213ENST00000474240 VPS8Q8N3P4 1428 aa-1.5□□□□□ -2.65
ECHDC1-213ENST00000474240 DMDP11532 3685 aa-1.51□□□□□ -2.65
ECHDC1-213ENST00000474240 PKIAP61925 76 aa-1.51□□□□□ -2.65
ECHDC1-213ENST00000474240 NCOA2Q15596 1464 aa-1.51□□□□□ -2.65
ECHDC1-213ENST00000474240 UMAD1C9J7I0 102 aa-1.52□□□□□ -2.65
ECHDC1-213ENST00000474240 PYY3Q5JQD4 70 aa-1.52□□□□□ -2.65
ECHDC1-213ENST00000474240 CCNB3Q8WWL7 1395 aa-1.52□□□□□ -2.65
ECHDC1-213ENST00000474240 DCHS1Q96JQ0 3298 aa-1.52□□□□□ -2.65
ECHDC1-213ENST00000474240 SPTBN5Q9NRC6 3674 aaKnown RBP-1.52□□□□□ -2.65
ECHDC1-213ENST00000474240 LOC400499M0QZD8 3231 aa-1.53□□□□□ -2.65
ECHDC1-213ENST00000474240 MT1FP04733 61 aa-1.53□□□□□ -2.65
ECHDC1-213ENST00000474240 DIP2BQ9P265 1576 aa-1.54□□□□□ -2.66
ECHDC1-213ENST00000474240 CEP350Q5VT06 3117 aa-1.54□□□□□ -2.66
ECHDC1-213ENST00000474240 DEFB130BP0DP73 79 aa-1.54□□□□□ -2.66
ECHDC1-213ENST00000474240 DEFB130AP0DP74 79 aa-1.54□□□□□ -2.66
ECHDC1-213ENST00000474240 ARFGEF2Q9Y6D5 1785 aa-1.54□□□□□ -2.66
ECHDC1-213ENST00000474240 TMEM131LA2VDJ0 1609 aa-1.55□□□□□ -2.66
ECHDC1-213ENST00000474240 SPEGQ15772 3267 aa-1.55□□□□□ -2.66
ECHDC1-213ENST00000474240 MRPL33O75394 65 aaKnown RBP-1.55□□□□□ -2.66
ECHDC1-213ENST00000474240 MT1LQ93083 61 aa-1.55□□□□□ -2.66
ECHDC1-213ENST00000474240 S100A16Q96FQ6 103 aaKnown RBP-1.55□□□□□ -2.66
ECHDC1-213ENST00000474240 SNHG12Q9BXW3 62 aa-1.55□□□□□ -2.66
ECHDC1-213ENST00000474240 MAP3K4Q9Y6R4 1608 aa-1.55□□□□□ -2.66
ECHDC1-213ENST00000474240 RANBP2P49792 3224 aaKnown RBP-1.55□□□□□ -2.66
ECHDC1-213ENST00000474240 ABCC3O15438 1527 aa-1.56□□□□□ -2.66
ECHDC1-213ENST00000474240 NDUFA4O00483 81 aa-1.56□□□□□ -2.66
ECHDC1-213ENST00000474240 MT1EP04732 61 aa-1.56□□□□□ -2.66
ECHDC1-213ENST00000474240 HMGA1P17096 107 aaKnown RBP-1.56□□□□□ -2.66
ECHDC1-213ENST00000474240 KRTAP19-5Q3LI72 72 aa-1.56□□□□□ -2.66
ECHDC1-213ENST00000474240 PIK3C2BO00750 1634 aa-1.57□□□□□ -2.66
ECHDC1-213ENST00000474240 PVALEFA0A1B0GWK0 134 aa-1.57□□□□□ -2.66
ECHDC1-213ENST00000474240 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.57□□□□□ -2.66
ECHDC1-213ENST00000474240 KANTRA0A1W2PQU2 76 aa-1.58□□□□□ -2.66
ECHDC1-213ENST00000474240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.58□□□□□ -2.66
ECHDC1-213ENST00000474240 KIF14Q15058 1648 aa-1.58□□□□□ -2.66
ECHDC1-213ENST00000474240 ANKRD36CQ5JPF3 1778 aa-1.59□□□□□ -2.66
ECHDC1-213ENST00000474240 ITSN1Q15811 1721 aa-1.59□□□□□ -2.66
ECHDC1-213ENST00000474240 ATP5EP2Q5VTU8 51 aa-1.59□□□□□ -2.66
ECHDC1-213ENST00000474240 V9GYS6 101 aa-1.6□□□□□ -2.67
ECHDC1-213ENST00000474240 PLCH1Q4KWH8 1693 aa-1.61□□□□□ -2.67
ECHDC1-213ENST00000474240 ZNF831Q5JPB2 1677 aa-1.61□□□□□ -2.67
ECHDC1-213ENST00000474240 WDFY4Q6ZS81 3184 aa-1.61□□□□□ -2.67
ECHDC1-213ENST00000474240 KIAA0586Q9BVV6 1533 aa-1.61□□□□□ -2.67
ECHDC1-213ENST00000474240 CDC42BPGQ6DT37 1551 aa-1.62□□□□□ -2.67
ECHDC1-213ENST00000474240 HFM1A2PYH4 1435 aa-1.63□□□□□ -2.67
ECHDC1-213ENST00000474240 DEFB131BA0A096LNP1 70 aa-1.63□□□□□ -2.67
ECHDC1-213ENST00000474240 NREPQ16612 68 aa-1.63□□□□□ -2.67
ECHDC1-213ENST00000474240 CFAP43Q8NDM7 1665 aa-1.64□□□□□ -2.67
ECHDC1-213ENST00000474240 A0A087WXM4 84 aa-1.64□□□□□ -2.67
ECHDC1-213ENST00000474240 CLPSL2Q6UWE3 100 aa-1.64□□□□□ -2.67
ECHDC1-213ENST00000474240 PPLO60437 1756 aa-1.64□□□□□ -2.67
ECHDC1-213ENST00000474240 CFAP54Q96N23 3096 aa-1.65□□□□□ -2.67
ECHDC1-213ENST00000474240 PARP4Q9UKK3 1724 aaKnown RBP-1.66□□□□□ -2.67
ECHDC1-213ENST00000474240 WDFY3Q8IZQ1 3526 aa-1.66□□□□□ -2.68
ECHDC1-213ENST00000474240 SZT2Q5T011 3432 aa-1.66□□□□□ -2.68
ECHDC1-213ENST00000474240 DEFB4AO15263 64 aa-1.67□□□□□ -2.68
ECHDC1-213ENST00000474240 UBL5Q9BZL1 73 aa-1.67□□□□□ -2.68
ECHDC1-213ENST00000474240 VPS13CQ709C8 3753 aa-1.68□□□□□ -2.68
ECHDC1-213ENST00000474240 MMP24-AS1A0A0U1RRL7 71 aa-1.68□□□□□ -2.68
ECHDC1-213ENST00000474240 VCANP13611 3396 aa-1.68□□□□□ -2.68
ECHDC1-213ENST00000474240 ZC3H13Q5T200 1668 aaKnown RBP-1.68□□□□□ -2.68
ECHDC1-213ENST00000474240 TOGARAM1Q9Y4F4 1720 aa-1.69□□□□□ -2.68
ECHDC1-213ENST00000474240 USP34Q70CQ2 3546 aa-1.69□□□□□ -2.68
ECHDC1-213ENST00000474240 MUC3AQ02505 3323 aa-1.69□□□□□ -2.68
ECHDC1-213ENST00000474240 TNP1P09430 55 aa-1.69□□□□□ -2.68
ECHDC1-213ENST00000474240 RALGAPBQ86X10 1494 aa-1.69□□□□□ -2.68
ECHDC1-213ENST00000474240 MKI67P46013 3256 aaKnown RBP-1.7□□□□□ -2.68
ECHDC1-213ENST00000474240 BVES-AS1Q5T3Y7 98 aa-1.7□□□□□ -2.68
ECHDC1-213ENST00000474240 RICTORQ6R327 1708 aa-1.7□□□□□ -2.68
ECHDC1-213ENST00000474240 UACAQ9BZF9 1416 aa-1.7□□□□□ -2.68
ECHDC1-213ENST00000474240 FRYLO94915 3013 aa-1.71□□□□□ -2.68
ECHDC1-213ENST00000474240 UNC80Q8N2C7 3258 aa-1.71□□□□□ -2.68
ECHDC1-213ENST00000474240 RPS29P62273 56 aaKnown RBP-1.71□□□□□ -2.68
ECHDC1-213ENST00000474240 WT1-ASQ06250 92 aa-1.71□□□□□ -2.68
ECHDC1-213ENST00000474240 TTC37Q6PGP7 1564 aa-1.72□□□□□ -2.68
ECHDC1-213ENST00000474240 KDM5DQ9BY66 1539 aa-1.72□□□□□ -2.69
ECHDC1-213ENST00000474240 ITSN2Q9NZM3 1697 aa-1.73□□□□□ -2.69
ECHDC1-213ENST00000474240 ARHGAP35Q9NRY4 1499 aa-1.73□□□□□ -2.69
ECHDC1-213ENST00000474240 DNAH14Q0VDD8 3507 aa-1.73□□□□□ -2.69
ECHDC1-213ENST00000474240 NRAPQ86VF7 1730 aa-1.73□□□□□ -2.69
ECHDC1-213ENST00000474240 KIF1AQ12756 1690 aa-1.74□□□□□ -2.69
ECHDC1-213ENST00000474240 H3BUA1 57 aa-1.75□□□□□ -2.69
ECHDC1-213ENST00000474240 MINOS1Q5TGZ0 78 aa-1.75□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms