RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 SIGMAR1Q99720 223 aa5.03□□□□□ -1.6
SMG5-203ENST00000473643 BPY2O14599 106 aa5.02□□□□□ -1.61
SMG5-203ENST00000473643 DSCR10P59022 87 aa5.02□□□□□ -1.61
SMG5-203ENST00000473643 KRTAP13-3Q3SY46 172 aa5.02□□□□□ -1.61
SMG5-203ENST00000473643 A8MWP4 228 aa5.01□□□□□ -1.61
SMG5-203ENST00000473643 K7ERU9 68 aa5.01□□□□□ -1.61
SMG5-203ENST00000473643 CDIP1Q9H305 208 aa5.01□□□□□ -1.61
SMG5-203ENST00000473643 NDUFB1O75438 58 aa5□□□□□ -1.61
SMG5-203ENST00000473643 IGKV3D-7A0A0C4DH55 119 aa4.99□□□□□ -1.61
SMG5-203ENST00000473643 A0A1B0GVX0 72 aa4.99□□□□□ -1.61
SMG5-203ENST00000473643 PCP4P48539 62 aa4.99□□□□□ -1.61
SMG5-203ENST00000473643 CXCL6P80162 114 aa4.99□□□□□ -1.61
SMG5-203ENST00000473643 LINC00643Q86TS7 51 aa4.99□□□□□ -1.61
SMG5-203ENST00000473643 PRR15Q8IV56 129 aa4.99□□□□□ -1.61
SMG5-203ENST00000473643 C8orf87E5RJ46 101 aa4.98□□□□□ -1.61
SMG5-203ENST00000473643 LINC00313P59037 77 aa4.97□□□□□ -1.61
SMG5-203ENST00000473643 ATP5EP2Q5VTU8 51 aa4.97□□□□□ -1.61
SMG5-203ENST00000473643 IGHV6-1A0A0B4J1U7 121 aa4.96□□□□□ -1.62
SMG5-203ENST00000473643 K7EQZ3 153 aa4.96□□□□□ -1.62
SMG5-203ENST00000473643 C9orf92A6NGG3 77 aa4.95□□□□□ -1.62
SMG5-203ENST00000473643 NOTCH2NLQ7Z3S9 236 aa4.95□□□□□ -1.62
SMG5-203ENST00000473643 A0A0U1RQV1 116 aa4.94□□□□□ -1.62
SMG5-203ENST00000473643 KRTAP16-1A8MUX0 517 aa4.94□□□□□ -1.62
SMG5-203ENST00000473643 XP32Q5T750 250 aa4.94□□□□□ -1.62
SMG5-203ENST00000473643 KRTAP9-2Q9BYQ4 174 aa4.94□□□□□ -1.62
SMG5-203ENST00000473643 C8orf17Q9NRJ1 99 aa4.94□□□□□ -1.62
SMG5-203ENST00000473643 Q8N9L7 120 aa4.93□□□□□ -1.62
SMG5-203ENST00000473643 MMP24-AS1A0A0U1RRL7 71 aa4.92□□□□□ -1.62
SMG5-203ENST00000473643 C20orf166-AS1Q96NR2 134 aa4.91□□□□□ -1.62
SMG5-203ENST00000473643 A8MUU9 505 aa4.9□□□□□ -1.63
SMG5-203ENST00000473643 LCE2AQ5TA79 106 aaPredicted RBP4.9□□□□□ -1.63
SMG5-203ENST00000473643 Q75L30 129 aa4.9□□□□□ -1.63
SMG5-203ENST00000473643 Q8N9P0 234 aaPredicted RBP4.9□□□□□ -1.63
SMG5-203ENST00000473643 TMEM254Q8TBM7 123 aa4.9□□□□□ -1.63
SMG5-203ENST00000473643 hDV103S1A0JD37 113 aa4.89□□□□□ -1.63
SMG5-203ENST00000473643 HCG22E2RYF7 251 aa4.88□□□□□ -1.63
SMG5-203ENST00000473643 SEC61BP60468 96 aaKnown RBP4.88□□□□□ -1.63
SMG5-203ENST00000473643 RPL37P61927 97 aaKnown RBP4.88□□□□□ -1.63
SMG5-203ENST00000473643 MRPL34Q9BQ48 92 aaKnown RBP4.88□□□□□ -1.63
SMG5-203ENST00000473643 IMUPQ9GZP8 106 aa4.88□□□□□ -1.63
SMG5-203ENST00000473643 KRTAP9-6A0A140TA67 174 aa4.87□□□□□ -1.63
SMG5-203ENST00000473643 CASC2Q6XLA1 102 aa4.87□□□□□ -1.63
SMG5-203ENST00000473643 HIST1H4AP62805 103 aaKnown RBP4.86□□□□□ -1.63
SMG5-203ENST00000473643 WFDC13Q8IUB5 93 aa4.86□□□□□ -1.63
SMG5-203ENST00000473643 SVIPQ8NHG7 77 aa4.86□□□□□ -1.63
SMG5-203ENST00000473643 KRTAP4-1Q9BYQ7 146 aa4.86□□□□□ -1.63
SMG5-203ENST00000473643 MT-ATP8P03928 68 aa4.85□□□□□ -1.63
SMG5-203ENST00000473643 A0A087WVE0 104 aa4.84□□□□□ -1.63
SMG5-203ENST00000473643 SCGB1A1P11684 91 aa4.83□□□□□ -1.64
SMG5-203ENST00000473643 ATP11AUNQ6ZP68 121 aa4.82□□□□□ -1.64
SMG5-203ENST00000473643 PCOTHQ58A44 107 aa4.81□□□□□ -1.64
SMG5-203ENST00000473643 ZCCHC13Q8WW36 166 aaKnown RBP4.8□□□□□ -1.64
SMG5-203ENST00000473643 TP53AIP1Q9HCN2 124 aa4.8□□□□□ -1.64
SMG5-203ENST00000473643 NDUFS5O43920 106 aa4.79□□□□□ -1.64
SMG5-203ENST00000473643 LCE2CQ5TA81 110 aa4.77□□□□□ -1.65
SMG5-203ENST00000473643 Q5W150 140 aa4.76□□□□□ -1.65
SMG5-203ENST00000473643 UQCRQO14949 82 aa4.75□□□□□ -1.65
SMG5-203ENST00000473643 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
SMG5-203ENST00000473643 OCR1Q9BZK8 76 aa4.75□□□□□ -1.65
SMG5-203ENST00000473643 FAM236AA0A1B0GUQ0 79 aa4.73□□□□□ -1.65
SMG5-203ENST00000473643 FAM236BA0A1B0GV22 79 aa4.73□□□□□ -1.65
SMG5-203ENST00000473643 SMIM20Q8N5G0 67 aa4.71□□□□□ -1.66
SMG5-203ENST00000473643 SPINK7P58062 85 aa4.7□□□□□ -1.66
SMG5-203ENST00000473643 TRAV22A0A0B4J277 110 aa4.69□□□□□ -1.66
SMG5-203ENST00000473643 ATOX1O00244 68 aa4.69□□□□□ -1.66
SMG5-203ENST00000473643 C5orf47Q569G3 176 aa4.69□□□□□ -1.66
SMG5-203ENST00000473643 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
SMG5-203ENST00000473643 IGKV2-30P06310 120 aa4.68□□□□□ -1.66
SMG5-203ENST00000473643 MT1HP80294 61 aa4.68□□□□□ -1.66
SMG5-203ENST00000473643 TRAV7A0A075B6U4 112 aa4.67□□□□□ -1.66
SMG5-203ENST00000473643 H0Y9P7 68 aa4.66□□□□□ -1.66
SMG5-203ENST00000473643 HRES1P13985 223 aa4.66□□□□□ -1.66
SMG5-203ENST00000473643 C7orf65Q6ZTY9 151 aa4.66□□□□□ -1.66
SMG5-203ENST00000473643 FLGP20930 4061 aaPredicted RBP4.65□□□□□ -1.66
SMG5-203ENST00000473643 IGKV2D-30A0A075B6S6 120 aa4.65□□□□□ -1.67
SMG5-203ENST00000473643 LOC101927531A0A1B0GV80 90 aa4.65□□□□□ -1.67
SMG5-203ENST00000473643 H3BPC8 53 aa4.65□□□□□ -1.67
SMG5-203ENST00000473643 MP68P56378 58 aa4.65□□□□□ -1.67
SMG5-203ENST00000473643 MPLKIPQ8TAP9 179 aa4.65□□□□□ -1.67
SMG5-203ENST00000473643 LCE2DQ5TA82 110 aaPredicted RBP4.64□□□□□ -1.67
SMG5-203ENST00000473643 SERP2Q8N6R1 65 aa4.64□□□□□ -1.67
SMG5-203ENST00000473643 CYP4F30PQ9H0H9 118 aa4.64□□□□□ -1.67
SMG5-203ENST00000473643 C1orf64Q8NEQ6 169 aa4.62□□□□□ -1.67
SMG5-203ENST00000473643 LINC00208Q96KT6 92 aa4.62□□□□□ -1.67
SMG5-203ENST00000473643 CRCT1Q9UGL9 99 aa4.6□□□□□ -1.67
SMG5-203ENST00000473643 LORP23490 312 aaPredicted RBP4.59□□□□□ -1.67
SMG5-203ENST00000473643 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.67
SMG5-203ENST00000473643 COX6B2Q6YFQ2 88 aa4.59□□□□□ -1.67
SMG5-203ENST00000473643 RBM12B-AS1Q9P1G2 102 aa4.59□□□□□ -1.67
SMG5-203ENST00000473643 COX7CP15954 63 aa4.58□□□□□ -1.68
SMG5-203ENST00000473643 M0R2T5 61 aa4.55□□□□□ -1.68
SMG5-203ENST00000473643 KLKP1Q107X0 134 aa4.55□□□□□ -1.68
SMG5-203ENST00000473643 C4orf26Q17RF5 130 aa4.55□□□□□ -1.68
SMG5-203ENST00000473643 ANAPC13Q9BS18 74 aa4.55□□□□□ -1.68
SMG5-203ENST00000473643 C20orf197Q8N268 126 aa4.54□□□□□ -1.68
SMG5-203ENST00000473643 KRTAP3-1Q9BYR8 98 aa4.53□□□□□ -1.68
SMG5-203ENST00000473643 FAM236DA0A1B0GTK5 79 aa4.52□□□□□ -1.69
SMG5-203ENST00000473643 FAM236CP0DP71 79 aa4.52□□□□□ -1.69
SMG5-203ENST00000473643 SNURFQ9Y675 71 aa4.52□□□□□ -1.69
SMG5-203ENST00000473643 H1FX-AS1Q4G0G2 97 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms