RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 VAMP8Q9BV40 100 aa2.2□□□□□ -2.06
SEC22A-204ENST00000473494 C22orf24Q9Y442 160 aa2.2□□□□□ -2.06
SEC22A-204ENST00000473494 TRGV2A0A075B6R0 118 aa2.19□□□□□ -2.06
SEC22A-204ENST00000473494 TRGV1A0A0A0MS02 117 aa2.19□□□□□ -2.06
SEC22A-204ENST00000473494 LINC01549A6NIU2 74 aa2.19□□□□□ -2.06
SEC22A-204ENST00000473494 NUPR1O60356 82 aa2.19□□□□□ -2.06
SEC22A-204ENST00000473494 POLR2KP53803 58 aaKnown RBP2.19□□□□□ -2.06
SEC22A-204ENST00000473494 LIMD2Q9BT23 127 aa2.19□□□□□ -2.06
SEC22A-204ENST00000473494 TRBV7-3A0A075B6L6 115 aa2.18□□□□□ -2.06
SEC22A-204ENST00000473494 CCKP06307 115 aa2.18□□□□□ -2.06
SEC22A-204ENST00000473494 UBE2DNLQ8IWF7 75 aa2.18□□□□□ -2.06
SEC22A-204ENST00000473494 SPTSSBQ8NFR3 76 aa2.18□□□□□ -2.06
SEC22A-204ENST00000473494 C18orf32Q8TCD1 76 aa2.18□□□□□ -2.06
SEC22A-204ENST00000473494 DMAC1Q96GE9 116 aa2.18□□□□□ -2.06
SEC22A-204ENST00000473494 NXT2Q9NPJ8 142 aaKnown RBP2.18□□□□□ -2.06
SEC22A-204ENST00000473494 CDC42SE1Q9NRR8 79 aa2.18□□□□□ -2.06
SEC22A-204ENST00000473494 MRPL35Q9NZE8 188 aaKnown RBP2.18□□□□□ -2.06
SEC22A-204ENST00000473494 PRO0255Q9UI72 69 aa2.18□□□□□ -2.06
SEC22A-204ENST00000473494 TRBV10-3A0A0K0K1G6 114 aa2.17□□□□□ -2.06
SEC22A-204ENST00000473494 NBDYA0A0U1RRE5 68 aa2.17□□□□□ -2.06
SEC22A-204ENST00000473494 D6R8Y8 96 aa2.17□□□□□ -2.06
SEC22A-204ENST00000473494 UBE2D3P61077 147 aa2.17□□□□□ -2.06
SEC22A-204ENST00000473494 UBE2D2P62837 147 aa2.17□□□□□ -2.06
SEC22A-204ENST00000473494 PYY3Q5JQD4 70 aa2.17□□□□□ -2.06
SEC22A-204ENST00000473494 WFDC10BQ8IUB3 73 aa2.17□□□□□ -2.06
SEC22A-204ENST00000473494 IFI27L1Q96BM0 104 aa2.17□□□□□ -2.06
SEC22A-204ENST00000473494 I3L3M4 83 aa2.16□□□□□ -2.06
SEC22A-204ENST00000473494 IGHV3-30P01768 117 aa2.16□□□□□ -2.06
SEC22A-204ENST00000473494 IGHV3-30-5P0DP03 117 aa2.16□□□□□ -2.06
SEC22A-204ENST00000473494 C15orf53Q8NAA6 179 aa2.16□□□□□ -2.06
SEC22A-204ENST00000473494 SMIM2Q9BVW6 85 aa2.16□□□□□ -2.06
SEC22A-204ENST00000473494 ST20Q9HBF5 79 aa2.16□□□□□ -2.06
SEC22A-204ENST00000473494 MYCBP2O75592 4640 aa2.16□□□□□ -2.06
SEC22A-204ENST00000473494 TRAV13-2A0A0B4J235 113 aa2.15□□□□□ -2.07
SEC22A-204ENST00000473494 IGIPA6NJ69 53 aa2.15□□□□□ -2.07
SEC22A-204ENST00000473494 HCG22E2RYF7 251 aa2.15□□□□□ -2.07
SEC22A-204ENST00000473494 JMJD7-PLA2G4BH0Y9G9 81 aa2.15□□□□□ -2.07
SEC22A-204ENST00000473494 PDE6GP18545 87 aa2.15□□□□□ -2.07
SEC22A-204ENST00000473494 FCER1GP30273 86 aa2.15□□□□□ -2.07
SEC22A-204ENST00000473494 IFI27P40305 119 aaPredicted RBP2.15□□□□□ -2.07
SEC22A-204ENST00000473494 HAMPP81172 84 aa2.15□□□□□ -2.07
SEC22A-204ENST00000473494 WFDC2Q14508 124 aa2.15□□□□□ -2.07
SEC22A-204ENST00000473494 ZNF56Q15929 161 aa2.15□□□□□ -2.07
SEC22A-204ENST00000473494 FAM74A4Q5TZK3 123 aa2.15□□□□□ -2.07
SEC22A-204ENST00000473494 DEFB104AQ8WTQ1 72 aa2.15□□□□□ -2.07
SEC22A-204ENST00000473494 PRO1933Q9H354 126 aa2.15□□□□□ -2.07
SEC22A-204ENST00000473494 LINC00474Q9P2X8 69 aa2.15□□□□□ -2.07
SEC22A-204ENST00000473494 VPS13BQ7Z7G8 4022 aa2.15□□□□□ -2.07
SEC22A-204ENST00000473494 MGPP08493 103 aa2.14□□□□□ -2.07
SEC22A-204ENST00000473494 CCL18P55774 89 aa2.14□□□□□ -2.07
SEC22A-204ENST00000473494 LELP1Q5T871 98 aa2.14□□□□□ -2.07
SEC22A-204ENST00000473494 BAGE3Q86Y29 109 aa2.14□□□□□ -2.07
SEC22A-204ENST00000473494 RPL39LQ96EH5 51 aaKnown RBP2.14□□□□□ -2.07
SEC22A-204ENST00000473494 AMELXQ99217 191 aa2.14□□□□□ -2.07
SEC22A-204ENST00000473494 HERC1Q15751 4861 aa2.14□□□□□ -2.07
SEC22A-204ENST00000473494 TRBV25-1A0A075B6N4 114 aa2.13□□□□□ -2.07
SEC22A-204ENST00000473494 LEPROTL1O95214 131 aa2.13□□□□□ -2.07
SEC22A-204ENST00000473494 CYSTM1Q9H1C7 97 aa2.13□□□□□ -2.07
SEC22A-204ENST00000473494 UBE2D4Q9Y2X8 147 aa2.13□□□□□ -2.07
SEC22A-204ENST00000473494 PKHD1L1Q86WI1 4243 aa2.13□□□□□ -2.07
SEC22A-204ENST00000473494 FAT3Q8TDW7 4589 aa2.13□□□□□ -2.07
SEC22A-204ENST00000473494 LRP1Q07954 4544 aaKnown RBP2.12□□□□□ -2.07
SEC22A-204ENST00000473494 hADV29S1A0JD25 119 aa2.12□□□□□ -2.07
SEC22A-204ENST00000473494 INE1O15225 51 aa2.12□□□□□ -2.07
SEC22A-204ENST00000473494 SEC11AP67812 179 aa2.12□□□□□ -2.07
SEC22A-204ENST00000473494 LINC01556Q5JQF7 62 aa2.12□□□□□ -2.07
SEC22A-204ENST00000473494 CYP4F30PQ9H0H9 118 aa2.12□□□□□ -2.07
SEC22A-204ENST00000473494 CDC42SE2Q9NRR3 84 aa2.12□□□□□ -2.07
SEC22A-204ENST00000473494 A0A087WTM6 91 aa2.11□□□□□ -2.07
SEC22A-204ENST00000473494 SYS1-DBNDD2H3BUS1 97 aa2.11□□□□□ -2.07
SEC22A-204ENST00000473494 C3orf79P0CE67 100 aa2.11□□□□□ -2.07
SEC22A-204ENST00000473494 IGLC3P0DOY3 106 aa2.11□□□□□ -2.07
SEC22A-204ENST00000473494 PLNP26678 52 aa2.11□□□□□ -2.07
SEC22A-204ENST00000473494 UBE2D1P51668 147 aa2.11□□□□□ -2.07
SEC22A-204ENST00000473494 PMCHL2Q9BQD1 86 aa2.11□□□□□ -2.07
SEC22A-204ENST00000473494 F8VRH5 84 aa2.1□□□□□ -2.07
SEC22A-204ENST00000473494 DNAL4O96015 105 aa2.1□□□□□ -2.07
SEC22A-204ENST00000473494 SMR3BP02814 79 aaPredicted RBP2.1□□□□□ -2.07
SEC22A-204ENST00000473494 RPL39P62891 51 aaKnown RBP2.1□□□□□ -2.07
SEC22A-204ENST00000473494 PMCHL1Q16048 86 aa2.1□□□□□ -2.07
SEC22A-204ENST00000473494 ENHOQ6UWT2 76 aa2.1□□□□□ -2.07
SEC22A-204ENST00000473494 FLG2Q5D862 2391 aaPredicted RBP2.09□□□□□ -2.07
SEC22A-204ENST00000473494 LINC00959A0A1B0GUT2 108 aa2.09□□□□□ -2.07
SEC22A-204ENST00000473494 KRTDAPP60985 99 aa2.09□□□□□ -2.07
SEC22A-204ENST00000473494 SFTA2Q6UW10 78 aa2.09□□□□□ -2.07
SEC22A-204ENST00000473494 CLPSL2Q6UWE3 100 aa2.09□□□□□ -2.07
SEC22A-204ENST00000473494 SRRM2Q9UQ35 2752 aaKnown RBP2.08□□□□□ -2.08
SEC22A-204ENST00000473494 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.08□□□□□ -2.08
SEC22A-204ENST00000473494 TRAV23DV6A0A075B6W5 121 aa2.08□□□□□ -2.08
SEC22A-204ENST00000473494 LOC110117498A0A087WWA1 95 aa2.08□□□□□ -2.08
SEC22A-204ENST00000473494 IGKV2-29A2NJV5 120 aaPredicted RBP2.08□□□□□ -2.08
SEC22A-204ENST00000473494 TRBV7-7A0A0K0K1E9 115 aa2.07□□□□□ -2.08
SEC22A-204ENST00000473494 ATOX1O00244 68 aa2.07□□□□□ -2.08
SEC22A-204ENST00000473494 ANGP03950 147 aaKnown RBP2.07□□□□□ -2.08
SEC22A-204ENST00000473494 KRTAP10-4P60372 401 aaPredicted RBP2.07□□□□□ -2.08
SEC22A-204ENST00000473494 HMCN2Q8NDA2 5059 aa2.06□□□□□ -2.08
SEC22A-204ENST00000473494 GVQW2A0A096LPI5 108 aaPredicted RBP2.06□□□□□ -2.08
SEC22A-204ENST00000473494 IGKV3OR2-268A0A0C4DH90 116 aa2.06□□□□□ -2.08
SEC22A-204ENST00000473494 TEX49A0A1B0GTD5 131 aa2.06□□□□□ -2.08
SEC22A-204ENST00000473494 LOC101927531A0A1B0GV80 90 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms