RNA–Protein interactions for RNA: ENST00000473171.5

LSAMP-202, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-202ENST00000473171 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.6□□□□□ -1.83
LSAMP-202ENST00000473171 SVBPQ8N300 66 aa3.6□□□□□ -1.83
LSAMP-202ENST00000473171 IGKV4-1P06312 121 aa3.59□□□□□ -1.83
LSAMP-202ENST00000473171 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
LSAMP-202ENST00000473171 SPINK7P58062 85 aa3.59□□□□□ -1.83
LSAMP-202ENST00000473171 LINC01545Q5VT33 79 aa3.59□□□□□ -1.83
LSAMP-202ENST00000473171 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.83
LSAMP-202ENST00000473171 NDUFA5Q16718 116 aa3.58□□□□□ -1.84
LSAMP-202ENST00000473171 DEFB116Q30KQ4 102 aa3.58□□□□□ -1.84
LSAMP-202ENST00000473171 PPDPFLQ8WWR9 84 aa3.58□□□□□ -1.84
LSAMP-202ENST00000473171 IGHV6-1A0A0B4J1U7 121 aa3.57□□□□□ -1.84
LSAMP-202ENST00000473171 WFDC13Q8IUB5 93 aa3.57□□□□□ -1.84
LSAMP-202ENST00000473171 A0A1W2PNM2 257 aa3.56□□□□□ -1.84
LSAMP-202ENST00000473171 PET117Q6UWS5 81 aa3.56□□□□□ -1.84
LSAMP-202ENST00000473171 NDUFV3P56181 108 aaKnown RBP3.55□□□□□ -1.84
LSAMP-202ENST00000473171 ZCCHC13Q8WW36 166 aaKnown RBP3.55□□□□□ -1.84
LSAMP-202ENST00000473171 MT1BP07438 61 aa3.54□□□□□ -1.84
LSAMP-202ENST00000473171 ATOH7Q8N100 152 aa3.54□□□□□ -1.84
LSAMP-202ENST00000473171 C12orf57Q99622 126 aa3.54□□□□□ -1.84
LSAMP-202ENST00000473171 H3BMG7 143 aa3.53□□□□□ -1.84
LSAMP-202ENST00000473171 C3orf79P0CE67 100 aa3.53□□□□□ -1.84
LSAMP-202ENST00000473171 A0A1B0GV72 72 aa3.52□□□□□ -1.85
LSAMP-202ENST00000473171 KRTDAPP60985 99 aa3.52□□□□□ -1.85
LSAMP-202ENST00000473171 BVES-AS1Q5T3Y7 98 aa3.52□□□□□ -1.85
LSAMP-202ENST00000473171 FAM218AQ96MZ4 157 aa3.51□□□□□ -1.85
LSAMP-202ENST00000473171 FABP2P12104 132 aa3.5□□□□□ -1.85
LSAMP-202ENST00000473171 Q5VV11 94 aa3.5□□□□□ -1.85
LSAMP-202ENST00000473171 LINC00472Q9H8W2 130 aa3.5□□□□□ -1.85
LSAMP-202ENST00000473171 SPRR2EP22531 72 aa3.49□□□□□ -1.85
LSAMP-202ENST00000473171 SPRR2BP35325 72 aa3.49□□□□□ -1.85
LSAMP-202ENST00000473171 SPRR2AP35326 72 aa3.49□□□□□ -1.85
LSAMP-202ENST00000473171 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
LSAMP-202ENST00000473171 A0A1B0GVX0 72 aa3.48□□□□□ -1.85
LSAMP-202ENST00000473171 C8orf87E5RJ46 101 aa3.48□□□□□ -1.85
LSAMP-202ENST00000473171 H1FX-AS1Q4G0G2 97 aa3.48□□□□□ -1.85
LSAMP-202ENST00000473171 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
LSAMP-202ENST00000473171 HIST1H2BKO60814 126 aa3.47□□□□□ -1.85
LSAMP-202ENST00000473171 HIST1H2BJP06899 126 aa3.47□□□□□ -1.85
LSAMP-202ENST00000473171 HIST1H2BOP23527 126 aa3.47□□□□□ -1.85
LSAMP-202ENST00000473171 HIST1H2BBP33778 126 aa3.47□□□□□ -1.85
LSAMP-202ENST00000473171 HIST1H2BDP58876 126 aa3.47□□□□□ -1.85
LSAMP-202ENST00000473171 HIST1H2BCP62807 126 aa3.47□□□□□ -1.85
LSAMP-202ENST00000473171 HIST2H2BEQ16778 126 aa3.47□□□□□ -1.85
LSAMP-202ENST00000473171 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.47□□□□□ -1.85
LSAMP-202ENST00000473171 LYRM7Q5U5X0 104 aa3.47□□□□□ -1.85
LSAMP-202ENST00000473171 HIST1H2BHQ93079 126 aa3.47□□□□□ -1.85
LSAMP-202ENST00000473171 HIST1H2BNQ99877 126 aa3.47□□□□□ -1.85
LSAMP-202ENST00000473171 HIST1H2BMQ99879 126 aa3.47□□□□□ -1.85
LSAMP-202ENST00000473171 TRBV7-4A0A0J9YYF1 115 aa3.46□□□□□ -1.86
LSAMP-202ENST00000473171 FAM236AA0A1B0GUQ0 79 aa3.46□□□□□ -1.86
LSAMP-202ENST00000473171 FAM236BA0A1B0GV22 79 aa3.46□□□□□ -1.86
LSAMP-202ENST00000473171 SNCGO76070 127 aa3.46□□□□□ -1.86
LSAMP-202ENST00000473171 ANKRD29Q8N6D5 301 aa3.46□□□□□ -1.86
LSAMP-202ENST00000473171 RAB37Q96AX2 223 aa3.46□□□□□ -1.86
LSAMP-202ENST00000473171 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
LSAMP-202ENST00000473171 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
LSAMP-202ENST00000473171 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
LSAMP-202ENST00000473171 TRACP01848 142 aa3.44□□□□□ -1.86
LSAMP-202ENST00000473171 KRTAP19-8Q3LI54 63 aa3.44□□□□□ -1.86
LSAMP-202ENST00000473171 CCKP06307 115 aa3.43□□□□□ -1.86
LSAMP-202ENST00000473171 H0YGX0 51 aa3.42□□□□□ -1.86
LSAMP-202ENST00000473171 HIST1H4GQ99525 98 aa3.42□□□□□ -1.86
LSAMP-202ENST00000473171 VPS25Q9BRG1 176 aa3.42□□□□□ -1.86
LSAMP-202ENST00000473171 IMUPQ9GZP8 106 aa3.42□□□□□ -1.86
LSAMP-202ENST00000473171 IGKV3D-7A0A0C4DH55 119 aa3.41□□□□□ -1.86
LSAMP-202ENST00000473171 C5orf47Q569G3 176 aa3.41□□□□□ -1.86
LSAMP-202ENST00000473171 SPRR2GQ9BYE4 73 aa3.41□□□□□ -1.86
LSAMP-202ENST00000473171 DSCR8Q96T75 97 aa3.4□□□□□ -1.87
LSAMP-202ENST00000473171 SPRR2DP22532 72 aa3.38□□□□□ -1.87
LSAMP-202ENST00000473171 C8orf17Q9NRJ1 99 aa3.38□□□□□ -1.87
LSAMP-202ENST00000473171 A0A1B0GX51 115 aa3.37□□□□□ -1.87
LSAMP-202ENST00000473171 HSBP1L1C9JCN9 74 aa3.37□□□□□ -1.87
LSAMP-202ENST00000473171 A8MU10 97 aa3.36□□□□□ -1.87
LSAMP-202ENST00000473171 J3KT08 172 aa3.36□□□□□ -1.87
LSAMP-202ENST00000473171 NDUFB1O75438 58 aa3.36□□□□□ -1.87
LSAMP-202ENST00000473171 COA6Q5JTJ3 125 aaKnown RBP3.36□□□□□ -1.87
LSAMP-202ENST00000473171 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
LSAMP-202ENST00000473171 Q6ZVQ6 151 aa3.36□□□□□ -1.87
LSAMP-202ENST00000473171 ORMDL1Q9P0S3 153 aa3.36□□□□□ -1.87
LSAMP-202ENST00000473171 A0A0B4J2C4 111 aa3.35□□□□□ -1.87
LSAMP-202ENST00000473171 DNAL4O96015 105 aa3.35□□□□□ -1.87
LSAMP-202ENST00000473171 RBM3P98179 157 aaKnown RBP3.35□□□□□ -1.87
LSAMP-202ENST00000473171 KRTAP12-2P59991 146 aa3.34□□□□□ -1.87
LSAMP-202ENST00000473171 C4orf26Q17RF5 130 aa3.33□□□□□ -1.88
LSAMP-202ENST00000473171 KRTAP8-1Q8IUC2 63 aa3.33□□□□□ -1.88
LSAMP-202ENST00000473171 TMEM256-PLSCR3K7ERE1 68 aa3.32□□□□□ -1.88
LSAMP-202ENST00000473171 NDUFS5O43920 106 aa3.31□□□□□ -1.88
LSAMP-202ENST00000473171 KLKP1Q107X0 134 aa3.31□□□□□ -1.88
LSAMP-202ENST00000473171 C7orf65Q6ZTY9 151 aa3.31□□□□□ -1.88
LSAMP-202ENST00000473171 C2orf91Q6ZV80 131 aa3.31□□□□□ -1.88
LSAMP-202ENST00000473171 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
LSAMP-202ENST00000473171 COX8AP10176 69 aa3.3□□□□□ -1.88
LSAMP-202ENST00000473171 Q6ZQT0 140 aa3.3□□□□□ -1.88
LSAMP-202ENST00000473171 MRPL34Q9BQ48 92 aaKnown RBP3.3□□□□□ -1.88
LSAMP-202ENST00000473171 PRO1854Q9UHT4 67 aa3.3□□□□□ -1.88
LSAMP-202ENST00000473171 S4R3F8 94 aa3.3□□□□□ -1.88
LSAMP-202ENST00000473171 H3BQ85 93 aa3.29□□□□□ -1.88
LSAMP-202ENST00000473171 CSAG1Q6PB30 78 aa3.29□□□□□ -1.88
LSAMP-202ENST00000473171 MMP24-AS1A0A0U1RRL7 71 aa3.28□□□□□ -1.88
LSAMP-202ENST00000473171 PSMB2P49721 201 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms