RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 Q6ZQY7 126 aa3.9□□□□□ -1.79
HDAC1-205ENST00000472928 Q9BRP9 147 aa3.9□□□□□ -1.79
HDAC1-205ENST00000472928 ORMDL1Q9P0S3 153 aa3.9□□□□□ -1.79
HDAC1-205ENST00000472928 DHRS4-AS1Q9P1J3 65 aa3.9□□□□□ -1.79
HDAC1-205ENST00000472928 LAMTOR3Q9UHA4 124 aa3.9□□□□□ -1.79
HDAC1-205ENST00000472928 A0A087WVE0 104 aa3.89□□□□□ -1.79
HDAC1-205ENST00000472928 FP248Q71RG6 208 aaPredicted RBP3.89□□□□□ -1.79
HDAC1-205ENST00000472928 PSORS1C2Q9UIG4 136 aa3.89□□□□□ -1.79
HDAC1-205ENST00000472928 JMJD7-PLA2G4BH0Y9G9 81 aa3.88□□□□□ -1.79
HDAC1-205ENST00000472928 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.88□□□□□ -1.79
HDAC1-205ENST00000472928 C20orf197Q8N268 126 aa3.88□□□□□ -1.79
HDAC1-205ENST00000472928 HIGD2AQ9BW72 106 aa3.88□□□□□ -1.79
HDAC1-205ENST00000472928 C14orf132Q9NPU4 83 aa3.88□□□□□ -1.79
HDAC1-205ENST00000472928 KRTAP10-8P60410 259 aa3.87□□□□□ -1.79
HDAC1-205ENST00000472928 C1orf137Q5JT78 98 aa3.87□□□□□ -1.79
HDAC1-205ENST00000472928 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
HDAC1-205ENST00000472928 H0Y9J4 135 aa3.86□□□□□ -1.79
HDAC1-205ENST00000472928 ERC2-IT1O76042 136 aa3.86□□□□□ -1.79
HDAC1-205ENST00000472928 KRTAP13-1Q8IUC0 172 aa3.86□□□□□ -1.79
HDAC1-205ENST00000472928 ST20-AS1Q8NBB2 130 aa3.86□□□□□ -1.79
HDAC1-205ENST00000472928 H3BQ85 93 aa3.85□□□□□ -1.79
HDAC1-205ENST00000472928 TMEM256-PLSCR3K7ERE1 68 aa3.85□□□□□ -1.79
HDAC1-205ENST00000472928 IGKV2-30P06310 120 aa3.85□□□□□ -1.79
HDAC1-205ENST00000472928 DEFB105AQ8NG35 78 aa3.85□□□□□ -1.79
HDAC1-205ENST00000472928 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
HDAC1-205ENST00000472928 UBL5Q9BZL1 73 aa3.85□□□□□ -1.79
HDAC1-205ENST00000472928 IGLV7-43P04211 117 aa3.84□□□□□ -1.79
HDAC1-205ENST00000472928 LINC01547P58512 204 aaPredicted RBP3.84□□□□□ -1.79
HDAC1-205ENST00000472928 RBM3P98179 157 aaKnown RBP3.84□□□□□ -1.79
HDAC1-205ENST00000472928 BRK1Q8WUW1 75 aa3.84□□□□□ -1.79
HDAC1-205ENST00000472928 IGLV5-48A0A075B6I7 105 aa3.83□□□□□ -1.8
HDAC1-205ENST00000472928 ZNF861PO60384 105 aa3.83□□□□□ -1.8
HDAC1-205ENST00000472928 PRR15Q8IV56 129 aa3.83□□□□□ -1.8
HDAC1-205ENST00000472928 F8WEM9 126 aa3.82□□□□□ -1.8
HDAC1-205ENST00000472928 CXCL6P80162 114 aa3.82□□□□□ -1.8
HDAC1-205ENST00000472928 PMAIP1Q13794 54 aa3.82□□□□□ -1.8
HDAC1-205ENST00000472928 Q8N377 158 aa3.82□□□□□ -1.8
HDAC1-205ENST00000472928 ZNF706Q9Y5V0 76 aaPredicted RBP3.82□□□□□ -1.8
HDAC1-205ENST00000472928 LOC110117498A0A087WWA1 95 aa3.81□□□□□ -1.8
HDAC1-205ENST00000472928 SPRR4Q96PI1 79 aa3.81□□□□□ -1.8
HDAC1-205ENST00000472928 A0A0U1RQV1 116 aa3.8□□□□□ -1.8
HDAC1-205ENST00000472928 PDE6GP18545 87 aa3.8□□□□□ -1.8
HDAC1-205ENST00000472928 FSIP2Q5CZC0 6907 aa3.8□□□□□ -1.8
HDAC1-205ENST00000472928 TRBV7-4A0A0J9YYF1 115 aa3.79□□□□□ -1.8
HDAC1-205ENST00000472928 SPRR1BP22528 89 aa3.79□□□□□ -1.8
HDAC1-205ENST00000472928 CD164Q04900 197 aa3.79□□□□□ -1.8
HDAC1-205ENST00000472928 LINC00483Q53H64 154 aa3.79□□□□□ -1.8
HDAC1-205ENST00000472928 SMIM29Q86T20 159 aa3.79□□□□□ -1.8
HDAC1-205ENST00000472928 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
HDAC1-205ENST00000472928 SPINK6Q6UWN8 80 aa3.78□□□□□ -1.8
HDAC1-205ENST00000472928 Q6ZQT0 140 aa3.78□□□□□ -1.8
HDAC1-205ENST00000472928 SNURFQ9Y675 71 aa3.78□□□□□ -1.8
HDAC1-205ENST00000472928 IGLV9-49A0A0B4J1Y8 123 aa3.77□□□□□ -1.81
HDAC1-205ENST00000472928 Q1T7F1 81 aa3.77□□□□□ -1.81
HDAC1-205ENST00000472928 TMEM254Q8TBM7 123 aa3.77□□□□□ -1.81
HDAC1-205ENST00000472928 ANAPC11Q9NYG5 84 aa3.77□□□□□ -1.81
HDAC1-205ENST00000472928 MOBPQ13875 183 aa3.76□□□□□ -1.81
HDAC1-205ENST00000472928 Q6ZVQ6 151 aa3.76□□□□□ -1.81
HDAC1-205ENST00000472928 Q8N9P0 234 aaPredicted RBP3.76□□□□□ -1.81
HDAC1-205ENST00000472928 IGLV8-61A0A075B6I0 122 aa3.75□□□□□ -1.81
HDAC1-205ENST00000472928 NREPQ16612 68 aa3.75□□□□□ -1.81
HDAC1-205ENST00000472928 IGFL1Q6UW32 110 aa3.75□□□□□ -1.81
HDAC1-205ENST00000472928 Q8NBF4 154 aa3.75□□□□□ -1.81
HDAC1-205ENST00000472928 MUC17Q685J3 4493 aa3.74□□□□□ -1.81
HDAC1-205ENST00000472928 A0A0G2JQZ4 141 aa3.74□□□□□ -1.81
HDAC1-205ENST00000472928 FAM229BQ4G0N7 80 aa3.74□□□□□ -1.81
HDAC1-205ENST00000472928 A0A087X002 238 aa3.73□□□□□ -1.81
HDAC1-205ENST00000472928 A0A1W2PNM2 257 aa3.73□□□□□ -1.81
HDAC1-205ENST00000472928 hDV103S1A0JD37 113 aa3.73□□□□□ -1.81
HDAC1-205ENST00000472928 KRTAP1-4P0C5Y4 121 aa3.73□□□□□ -1.81
HDAC1-205ENST00000472928 CRCT1Q9UGL9 99 aa3.73□□□□□ -1.81
HDAC1-205ENST00000472928 BPY2O14599 106 aa3.72□□□□□ -1.81
HDAC1-205ENST00000472928 KRTAP13-2Q52LG2 175 aa3.72□□□□□ -1.81
HDAC1-205ENST00000472928 OCR1Q9BZK8 76 aa3.71□□□□□ -1.82
HDAC1-205ENST00000472928 PRR4Q16378 134 aa3.7□□□□□ -1.82
HDAC1-205ENST00000472928 CYP4F30PQ9H0H9 118 aa3.7□□□□□ -1.82
HDAC1-205ENST00000472928 A0A087WSZ3 146 aa3.69□□□□□ -1.82
HDAC1-205ENST00000472928 IGKV2D-30A0A075B6S6 120 aa3.68□□□□□ -1.82
HDAC1-205ENST00000472928 NDUFS5O43920 106 aa3.68□□□□□ -1.82
HDAC1-205ENST00000472928 SSBP3-AS1Q7Z2R9 100 aa3.68□□□□□ -1.82
HDAC1-205ENST00000472928 TYMSOSQ8TAI1 123 aa3.68□□□□□ -1.82
HDAC1-205ENST00000472928 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
HDAC1-205ENST00000472928 A0A1B0GW54 56 aa3.67□□□□□ -1.82
HDAC1-205ENST00000472928 IGKV4-1P06312 121 aa3.67□□□□□ -1.82
HDAC1-205ENST00000472928 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
HDAC1-205ENST00000472928 TRAV22A0A0B4J277 110 aa3.66□□□□□ -1.82
HDAC1-205ENST00000472928 C1orf64Q8NEQ6 169 aa3.66□□□□□ -1.82
HDAC1-205ENST00000472928 ZCCHC13Q8WW36 166 aaKnown RBP3.66□□□□□ -1.82
HDAC1-205ENST00000472928 LINC00304Q8N9R0 145 aa3.65□□□□□ -1.83
HDAC1-205ENST00000472928 RBM12B-AS1Q9P1G2 102 aa3.64□□□□□ -1.83
HDAC1-205ENST00000472928 NDUFB1O75438 58 aa3.63□□□□□ -1.83
HDAC1-205ENST00000472928 ATP11AUNQ6ZP68 121 aa3.63□□□□□ -1.83
HDAC1-205ENST00000472928 LIMD2Q9BT23 127 aa3.63□□□□□ -1.83
HDAC1-205ENST00000472928 DEFB116Q30KQ4 102 aa3.62□□□□□ -1.83
HDAC1-205ENST00000472928 Q5VV11 94 aa3.62□□□□□ -1.83
HDAC1-205ENST00000472928 Q96NJ1 140 aa3.62□□□□□ -1.83
HDAC1-205ENST00000472928 PSPHP1O15172 72 aa3.61□□□□□ -1.83
HDAC1-205ENST00000472928 SPINK1P00995 79 aa3.61□□□□□ -1.83
HDAC1-205ENST00000472928 SPAG11AQ6PDA7 123 aa3.61□□□□□ -1.83
HDAC1-205ENST00000472928 Q8N9L7 120 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms