RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 NBEAL2Q6ZNJ1 2754 aa-2.09□□□□□ -2.74
PRPF40A-208ENST00000472760 CCDC168Q8NDH2 2452 aa-2.09□□□□□ -2.74
PRPF40A-208ENST00000472760 HFM1A2PYH4 1435 aa-2.09□□□□□ -2.74
PRPF40A-208ENST00000472760 ACACBO00763 2458 aa-2.1□□□□□ -2.75
PRPF40A-208ENST00000472760 KDM5DQ9BY66 1539 aa-2.1□□□□□ -2.75
PRPF40A-208ENST00000472760 MT1HP80294 61 aa-2.1□□□□□ -2.75
PRPF40A-208ENST00000472760 DYNC1H1Q14204 4646 aaKnown RBP-2.11□□□□□ -2.75
PRPF40A-208ENST00000472760 RIF1Q5UIP0 2472 aaKnown RBP-2.11□□□□□ -2.75
PRPF40A-208ENST00000472760 KIAA0586Q9BVV6 1533 aa-2.12□□□□□ -2.75
PRPF40A-208ENST00000472760 UBL5Q9BZL1 73 aa-2.12□□□□□ -2.75
PRPF40A-208ENST00000472760 ARHGAP35Q9NRY4 1499 aa-2.13□□□□□ -2.75
PRPF40A-208ENST00000472760 H3BUT2 72 aa-2.13□□□□□ -2.75
PRPF40A-208ENST00000472760 S100A13Q99584 98 aa-2.13□□□□□ -2.75
PRPF40A-208ENST00000472760 ZC3H13Q5T200 1668 aaKnown RBP-2.13□□□□□ -2.75
PRPF40A-208ENST00000472760 DNAH7Q8WXX0 4024 aa-2.14□□□□□ -2.75
PRPF40A-208ENST00000472760 KCNQ1DNQ9H478 68 aa-2.14□□□□□ -2.75
PRPF40A-208ENST00000472760 ANKRD36CQ5JPF3 1778 aa-2.14□□□□□ -2.75
PRPF40A-208ENST00000472760 GNG2P59768 71 aa-2.15□□□□□ -2.75
PRPF40A-208ENST00000472760 RALGAPBQ86X10 1494 aa-2.15□□□□□ -2.75
PRPF40A-208ENST00000472760 DNAH8Q96JB1 4490 aa-2.16□□□□□ -2.76
PRPF40A-208ENST00000472760 DEFB1P60022 68 aa-2.16□□□□□ -2.76
PRPF40A-208ENST00000472760 TIMM8BQ9Y5J9 83 aaPredicted RBP-2.16□□□□□ -2.76
PRPF40A-208ENST00000472760 CELSR3Q9NYQ7 3312 aa-2.17□□□□□ -2.76
PRPF40A-208ENST00000472760 RANBP2P49792 3224 aaKnown RBP-2.17□□□□□ -2.76
PRPF40A-208ENST00000472760 TJP1Q07157 1748 aa-2.19□□□□□ -2.76
PRPF40A-208ENST00000472760 CRIP1P50238 77 aa-2.19□□□□□ -2.76
PRPF40A-208ENST00000472760 WT1-ASQ06250 92 aa-2.19□□□□□ -2.76
PRPF40A-208ENST00000472760 KRTAP19-5Q3LI72 72 aa-2.19□□□□□ -2.76
PRPF40A-208ENST00000472760 ABCC1P33527 1531 aa-2.19□□□□□ -2.76
PRPF40A-208ENST00000472760 DCAF1Q9Y4B6 1507 aa-2.2□□□□□ -2.76
PRPF40A-208ENST00000472760 FRYQ5TBA9 3013 aa-2.2□□□□□ -2.76
PRPF40A-208ENST00000472760 PARP4Q9UKK3 1724 aaKnown RBP-2.2□□□□□ -2.76
PRPF40A-208ENST00000472760 C5orf42Q9H799 3197 aa-2.2□□□□□ -2.76
PRPF40A-208ENST00000472760 RNF17Q9BXT8 1623 aaKnown RBP-2.2□□□□□ -2.76
PRPF40A-208ENST00000472760 ITSN2Q9NZM3 1697 aa-2.21□□□□□ -2.76
PRPF40A-208ENST00000472760 SRCAPQ6ZRS2 3230 aa-2.21□□□□□ -2.76
PRPF40A-208ENST00000472760 TOGARAM1Q9Y4F4 1720 aa-2.23□□□□□ -2.77
PRPF40A-208ENST00000472760 BVES-AS1Q5T3Y7 98 aa-2.24□□□□□ -2.77
PRPF40A-208ENST00000472760 CHD7Q9P2D1 2997 aa-2.24□□□□□ -2.77
PRPF40A-208ENST00000472760 MINOS1Q5TGZ0 78 aa-2.26□□□□□ -2.77
PRPF40A-208ENST00000472760 NRAPQ86VF7 1730 aa-2.26□□□□□ -2.77
PRPF40A-208ENST00000472760 MED14O60244 1454 aa-2.26□□□□□ -2.77
PRPF40A-208ENST00000472760 ERVK-7P63135 1459 aa-2.26□□□□□ -2.77
PRPF40A-208ENST00000472760 ITPR1Q14643 2758 aa-2.27□□□□□ -2.77
PRPF40A-208ENST00000472760 EIF2AK4Q9P2K8 1649 aaKnown RBP-2.27□□□□□ -2.77
PRPF40A-208ENST00000472760 CD163L1Q9NR16 1453 aa-2.27□□□□□ -2.77
PRPF40A-208ENST00000472760 RB1CC1Q8TDY2 1594 aa-2.27□□□□□ -2.77
PRPF40A-208ENST00000472760 INO80Q9ULG1 1556 aaPredicted RBP-2.27□□□□□ -2.77
PRPF40A-208ENST00000472760 RPS27P42677 84 aaKnown RBP-2.28□□□□□ -2.77
PRPF40A-208ENST00000472760 ENHOQ6UWT2 76 aa-2.28□□□□□ -2.77
PRPF40A-208ENST00000472760 RPS27LQ71UM5 84 aaKnown RBP-2.28□□□□□ -2.77
PRPF40A-208ENST00000472760 IGLV5-48A0A075B6I7 105 aa-2.29□□□□□ -2.78
PRPF40A-208ENST00000472760 MMP24-AS1A0A0U1RRL7 71 aa-2.29□□□□□ -2.78
PRPF40A-208ENST00000472760 KIF1AQ12756 1690 aa-2.29□□□□□ -2.78
PRPF40A-208ENST00000472760 CSMD1Q96PZ7 3565 aa-2.29□□□□□ -2.78
PRPF40A-208ENST00000472760 CFAP74Q9C0B2 1584 aa-2.3□□□□□ -2.78
PRPF40A-208ENST00000472760 LMTK2Q8IWU2 1503 aa-2.3□□□□□ -2.78
PRPF40A-208ENST00000472760 ETDCA0A1B0GVM5 59 aa-2.3□□□□□ -2.78
PRPF40A-208ENST00000472760 CCDC18Q5T9S5 1454 aa-2.31□□□□□ -2.78
PRPF40A-208ENST00000472760 TNP1P09430 55 aa-2.32□□□□□ -2.78
PRPF40A-208ENST00000472760 COL6A5A8TX70 2615 aa-2.33□□□□□ -2.78
PRPF40A-208ENST00000472760 MT1XP80297 61 aa-2.33□□□□□ -2.78
PRPF40A-208ENST00000472760 CLPSL2Q6UWE3 100 aa-2.33□□□□□ -2.78
PRPF40A-208ENST00000472760 CEP295Q9C0D2 2601 aa-2.33□□□□□ -2.78
PRPF40A-208ENST00000472760 SPTBN5Q9NRC6 3674 aaKnown RBP-2.33□□□□□ -2.78
PRPF40A-208ENST00000472760 C18orf32Q8TCD1 76 aa-2.34□□□□□ -2.78
PRPF40A-208ENST00000472760 SPENQ96T58 3664 aaKnown RBP-2.35□□□□□ -2.78
PRPF40A-208ENST00000472760 SMG1Q96Q15 3661 aaKnown RBP-2.35□□□□□ -2.79
PRPF40A-208ENST00000472760 H3BVH4 76 aa-2.36□□□□□ -2.79
PRPF40A-208ENST00000472760 ANKARQ7Z5J8 1434 aa-2.36□□□□□ -2.79
PRPF40A-208ENST00000472760 TLN2Q9Y4G6 2542 aa-2.37□□□□□ -2.79
PRPF40A-208ENST00000472760 NHSQ6T4R5 1651 aa-2.37□□□□□ -2.79
PRPF40A-208ENST00000472760 BPTFQ12830 3046 aa-2.38□□□□□ -2.79
PRPF40A-208ENST00000472760 H3BUA1 57 aa-2.38□□□□□ -2.79
PRPF40A-208ENST00000472760 EYSQ5T1H1 3165 aa-2.39□□□□□ -2.79
PRPF40A-208ENST00000472760 C6orf48Q9UBA6 75 aa-2.39□□□□□ -2.79
PRPF40A-208ENST00000472760 DYNC2H1Q8NCM8 4307 aaKnown RBP-2.39□□□□□ -2.79
PRPF40A-208ENST00000472760 LRRIQ1Q96JM4 1722 aa-2.41□□□□□ -2.8
PRPF40A-208ENST00000472760 FCER1GP30273 86 aa-2.41□□□□□ -2.8
PRPF40A-208ENST00000472760 LRBAP50851 2863 aa-2.42□□□□□ -2.8
PRPF40A-208ENST00000472760 SMR3BP02814 79 aaPredicted RBP-2.42□□□□□ -2.8
PRPF40A-208ENST00000472760 NOP10Q9NPE3 64 aaKnown RBP-2.42□□□□□ -2.8
PRPF40A-208ENST00000472760 TRRAPQ9Y4A5 3859 aa-2.42□□□□□ -2.8
PRPF40A-208ENST00000472760 NCBP2-AS2Q69YL0 99 aa-2.44□□□□□ -2.8
PRPF40A-208ENST00000472760 DNAH17Q9UFH2 4485 aa-2.44□□□□□ -2.8
PRPF40A-208ENST00000472760 LY75O60449 1722 aa-2.45□□□□□ -2.8
PRPF40A-208ENST00000472760 ABCA13Q86UQ4 5058 aa-2.45□□□□□ -2.8
PRPF40A-208ENST00000472760 MYO9AB2RTY4 2548 aa-2.46□□□□□ -2.8
PRPF40A-208ENST00000472760 SMARCA2P51531 1590 aa-2.47□□□□□ -2.8
PRPF40A-208ENST00000472760 SFTA3P0C7M3 94 aa-2.47□□□□□ -2.8
PRPF40A-208ENST00000472760 MT1HL1P0DM35 61 aa-2.47□□□□□ -2.8
PRPF40A-208ENST00000472760 DEFB114Q30KQ6 69 aa-2.47□□□□□ -2.8
PRPF40A-208ENST00000472760 CFAP46Q8IYW2 2715 aa-2.47□□□□□ -2.8
PRPF40A-208ENST00000472760 KRTAP8-1Q8IUC2 63 aa-2.49□□□□□ -2.81
PRPF40A-208ENST00000472760 DNAH5Q8TE73 4624 aa-2.49□□□□□ -2.81
PRPF40A-208ENST00000472760 CDC42BPAQ5VT25 1732 aa-2.5□□□□□ -2.81
PRPF40A-208ENST00000472760 ABCC6O95255 1503 aa-2.5□□□□□ -2.81
PRPF40A-208ENST00000472760 RRBP1Q9P2E9 1410 aaKnown RBP-2.51□□□□□ -2.81
PRPF40A-208ENST00000472760 ABCA8O94911 1581 aa-2.51□□□□□ -2.81
PRPF40A-208ENST00000472760 MYO5CQ9NQX4 1742 aa-2.51□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms