RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 HIST1H1AQ02539 215 aaPredicted RBP-0.76□□□□□ -2.53
CLK1-209ENST00000472679 Q56UQ5 140 aa-0.76□□□□□ -2.53
CLK1-209ENST00000472679 FAM74A4Q5TZK3 123 aa-0.76□□□□□ -2.53
CLK1-209ENST00000472679 DEFB106AQ8N104 65 aa-0.76□□□□□ -2.53
CLK1-209ENST00000472679 FAM107BQ9H098 131 aa-0.76□□□□□ -2.53
CLK1-209ENST00000472679 APOC4-APOC2K7ER74 178 aa-0.77□□□□□ -2.53
CLK1-209ENST00000472679 IFNGP01579 166 aa-0.77□□□□□ -2.53
CLK1-209ENST00000472679 IFI6P09912 130 aa-0.77□□□□□ -2.53
CLK1-209ENST00000472679 S100A12P80511 92 aa-0.77□□□□□ -2.53
CLK1-209ENST00000472679 SMIM21Q3B7S5 101 aa-0.77□□□□□ -2.53
CLK1-209ENST00000472679 Q6JHZ5 121 aa-0.77□□□□□ -2.53
CLK1-209ENST00000472679 KCNQ1DNQ9H478 68 aa-0.77□□□□□ -2.53
CLK1-209ENST00000472679 TRBV7-4A0A0J9YYF1 115 aa-0.78□□□□□ -2.53
CLK1-209ENST00000472679 TRBV6-1A0A0K0K1D8 114 aa-0.78□□□□□ -2.53
CLK1-209ENST00000472679 GNG7O60262 68 aa-0.78□□□□□ -2.53
CLK1-209ENST00000472679 PPP1R17O96001 155 aa-0.78□□□□□ -2.53
CLK1-209ENST00000472679 HMGN2P05204 90 aaKnown RBP-0.78□□□□□ -2.53
CLK1-209ENST00000472679 CGREF1Q99674 301 aa-0.78□□□□□ -2.53
CLK1-209ENST00000472679 NDUFA4L2Q9NRX3 87 aa-0.78□□□□□ -2.53
CLK1-209ENST00000472679 C7orf77A4D0Y5 90 aa-0.79□□□□□ -2.54
CLK1-209ENST00000472679 SNAPC5O75971 98 aa-0.79□□□□□ -2.54
CLK1-209ENST00000472679 S100A10P60903 97 aa-0.79□□□□□ -2.54
CLK1-209ENST00000472679 CKS1BP61024 79 aa-0.79□□□□□ -2.54
CLK1-209ENST00000472679 SARNPP82979 210 aaKnown RBP-0.79□□□□□ -2.54
CLK1-209ENST00000472679 CCDC153Q494R4 210 aa-0.79□□□□□ -2.54
CLK1-209ENST00000472679 LINC01545Q5VT33 79 aa-0.79□□□□□ -2.54
CLK1-209ENST00000472679 SNRNP25Q9BV90 132 aaKnown RBP-0.79□□□□□ -2.54
CLK1-209ENST00000472679 TOMM7Q9P0U1 55 aa-0.79□□□□□ -2.54
CLK1-209ENST00000472679 TCHHQ07283 1943 aa-0.79□□□□□ -2.54
CLK1-209ENST00000472679 TRAV13-2A0A0B4J235 113 aa-0.8□□□□□ -2.54
CLK1-209ENST00000472679 F8VRH5 84 aa-0.8□□□□□ -2.54
CLK1-209ENST00000472679 K7EIM0 57 aa-0.8□□□□□ -2.54
CLK1-209ENST00000472679 M0R135 149 aa-0.8□□□□□ -2.54
CLK1-209ENST00000472679 IGLC6P0CF74 106 aa-0.8□□□□□ -2.54
CLK1-209ENST00000472679 GCHFRP30047 84 aa-0.8□□□□□ -2.54
CLK1-209ENST00000472679 GUCA1AP43080 201 aaPredicted RBP-0.8□□□□□ -2.54
CLK1-209ENST00000472679 CRIP1P50238 77 aa-0.8□□□□□ -2.54
CLK1-209ENST00000472679 NCS1P62166 190 aa-0.8□□□□□ -2.54
CLK1-209ENST00000472679 BVES-AS1Q5T3Y7 98 aa-0.8□□□□□ -2.54
CLK1-209ENST00000472679 NXT2Q9NPJ8 142 aaKnown RBP-0.8□□□□□ -2.54
CLK1-209ENST00000472679 TRAV22A0A0B4J277 110 aa-0.81□□□□□ -2.54
CLK1-209ENST00000472679 TRAV21A0A0B4J279 112 aa-0.81□□□□□ -2.54
CLK1-209ENST00000472679 PDCD5O14737 125 aa-0.81□□□□□ -2.54
CLK1-209ENST00000472679 NDUFB1O75438 58 aa-0.81□□□□□ -2.54
CLK1-209ENST00000472679 S100A8P05109 93 aa-0.81□□□□□ -2.54
CLK1-209ENST00000472679 COMMD6Q7Z4G1 85 aa-0.81□□□□□ -2.54
CLK1-209ENST00000472679 KCNRGQ8N5I3 272 aa-0.81□□□□□ -2.54
CLK1-209ENST00000472679 ARL11Q969Q4 196 aa-0.81□□□□□ -2.54
CLK1-209ENST00000472679 TRGV9Q99603 122 aa-0.81□□□□□ -2.54
CLK1-209ENST00000472679 CDC42SE2Q9NRR3 84 aa-0.81□□□□□ -2.54
CLK1-209ENST00000472679 CDKN2A-AS1Q9UH64 79 aa-0.81□□□□□ -2.54
CLK1-209ENST00000472679 TRAV30A0A087WSZ9 112 aa-0.82□□□□□ -2.54
CLK1-209ENST00000472679 A0A0G2JND7 137 aa-0.82□□□□□ -2.54
CLK1-209ENST00000472679 MGPP08493 103 aa-0.82□□□□□ -2.54
CLK1-209ENST00000472679 SAA2P0DJI9 122 aaPredicted RBP-0.82□□□□□ -2.54
CLK1-209ENST00000472679 COX8AP10176 69 aa-0.82□□□□□ -2.54
CLK1-209ENST00000472679 MORN2Q502X0 79 aa-0.82□□□□□ -2.54
CLK1-209ENST00000472679 RPL39P5Q59GN2 51 aa-0.82□□□□□ -2.54
CLK1-209ENST00000472679 PYDC1Q8WXC3 89 aa-0.82□□□□□ -2.54
CLK1-209ENST00000472679 ARHGAP5-AS1Q96IT6 56 aa-0.82□□□□□ -2.54
CLK1-209ENST00000472679 HIGD1BQ9P298 99 aa-0.82□□□□□ -2.54
CLK1-209ENST00000472679 COPZ2Q9P299 210 aa-0.82□□□□□ -2.54
CLK1-209ENST00000472679 hADV29S1A0JD25 119 aa-0.83□□□□□ -2.54
CLK1-209ENST00000472679 IGLC7A0M8Q6 106 aa-0.83□□□□□ -2.54
CLK1-209ENST00000472679 SYS1-DBNDD2H3BUS1 97 aa-0.83□□□□□ -2.54
CLK1-209ENST00000472679 UBE2L3P68036 154 aaKnown RBP-0.83□□□□□ -2.54
CLK1-209ENST00000472679 PIGYQ3MUY2 71 aa-0.83□□□□□ -2.54
CLK1-209ENST00000472679 SPTSSBQ8NFR3 76 aa-0.83□□□□□ -2.54
CLK1-209ENST00000472679 ABRACLQ9P1F3 81 aa-0.83□□□□□ -2.54
CLK1-209ENST00000472679 CYB5AP00167 134 aa-0.84□□□□□ -2.54
CLK1-209ENST00000472679 SPINK8P0C7L1 97 aa-0.84□□□□□ -2.54
CLK1-209ENST00000472679 TRAPPC2P0DI81 140 aa-0.84□□□□□ -2.54
CLK1-209ENST00000472679 TRAPPC2BP0DI82 140 aa-0.84□□□□□ -2.54
CLK1-209ENST00000472679 LINC00158P58513 81 aa-0.84□□□□□ -2.54
CLK1-209ENST00000472679 WHAMMP3Q1A5X7 153 aa-0.84□□□□□ -2.54
CLK1-209ENST00000472679 SPTSSAQ969W0 71 aa-0.84□□□□□ -2.54
CLK1-209ENST00000472679 AIF1LQ9BQI0 150 aa-0.84□□□□□ -2.54
CLK1-209ENST00000472679 BATF3Q9NR55 127 aa-0.84□□□□□ -2.54
CLK1-209ENST00000472679 SCP2D1Q9UJQ7 156 aa-0.84□□□□□ -2.54
CLK1-209ENST00000472679 PVALEFA0A1B0GWK0 134 aa-0.85□□□□□ -2.55
CLK1-209ENST00000472679 H3BUT2 72 aa-0.85□□□□□ -2.55
CLK1-209ENST00000472679 M0R129 80 aa-0.85□□□□□ -2.55
CLK1-209ENST00000472679 TSPAN19P0C672 248 aa-0.85□□□□□ -2.55
CLK1-209ENST00000472679 IGLC1P0CG04 106 aa-0.85□□□□□ -2.55
CLK1-209ENST00000472679 COX7BP24311 80 aa-0.85□□□□□ -2.55
CLK1-209ENST00000472679 COX17Q14061 63 aa-0.85□□□□□ -2.55
CLK1-209ENST00000472679 S100A7L2Q5SY68 101 aa-0.85□□□□□ -2.55
CLK1-209ENST00000472679 LSM10Q969L4 123 aaKnown RBP-0.85□□□□□ -2.55
CLK1-209ENST00000472679 SPANXCQ9NY87 97 aa-0.85□□□□□ -2.55
CLK1-209ENST00000472679 SMIM27A0A1W2PRY6 76 aa-0.86□□□□□ -2.55
CLK1-209ENST00000472679 SNRPGP15A8MWD9 76 aa-0.86□□□□□ -2.55
CLK1-209ENST00000472679 CORTO00230 105 aa-0.86□□□□□ -2.55
CLK1-209ENST00000472679 DBIP07108 87 aaKnown RBP-0.86□□□□□ -2.55
CLK1-209ENST00000472679 S100A3P33764 101 aa-0.86□□□□□ -2.55
CLK1-209ENST00000472679 SNRPGP62308 76 aaKnown RBP-0.86□□□□□ -2.55
CLK1-209ENST00000472679 CCDC58Q4VC31 144 aa-0.86□□□□□ -2.55
CLK1-209ENST00000472679 SERP2Q8N6R1 65 aa-0.86□□□□□ -2.55
CLK1-209ENST00000472679 C1orf54Q8WWF1 131 aa-0.86□□□□□ -2.55
CLK1-209ENST00000472679 SNHG12Q9BXW3 62 aa-0.86□□□□□ -2.55
CLK1-209ENST00000472679 SERP1Q9Y6X1 66 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms