RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 SS18L2Q9UHA2 77 aa5.09□□□□□ -1.59
SF3A1-206ENST00000471037 ACYP1P07311 99 aa5.08□□□□□ -1.6
SF3A1-206ENST00000471037 KRTAP4-1Q9BYQ7 146 aa5.08□□□□□ -1.6
SF3A1-206ENST00000471037 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
SF3A1-206ENST00000471037 H3BS24 57 aa5.06□□□□□ -1.6
SF3A1-206ENST00000471037 K7ERU9 68 aa5.06□□□□□ -1.6
SF3A1-206ENST00000471037 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
SF3A1-206ENST00000471037 NREPQ16612 68 aa5.04□□□□□ -1.6
SF3A1-206ENST00000471037 UBL5Q9BZL1 73 aa5.04□□□□□ -1.6
SF3A1-206ENST00000471037 LINC00846Q9NV44 126 aa5.04□□□□□ -1.6
SF3A1-206ENST00000471037 XP32Q5T750 250 aa5.02□□□□□ -1.61
SF3A1-206ENST00000471037 Q6ZVQ6 151 aa5.02□□□□□ -1.61
SF3A1-206ENST00000471037 LINC00472Q9H8W2 130 aa5.01□□□□□ -1.61
SF3A1-206ENST00000471037 J3KT08 172 aa5□□□□□ -1.61
SF3A1-206ENST00000471037 C1orf195Q5TG92 126 aa5□□□□□ -1.61
SF3A1-206ENST00000471037 Q96NJ1 140 aa5□□□□□ -1.61
SF3A1-206ENST00000471037 BPY2O14599 106 aa4.98□□□□□ -1.61
SF3A1-206ENST00000471037 IGKV4-1P06312 121 aa4.98□□□□□ -1.61
SF3A1-206ENST00000471037 KRTAP19-2Q3LHN2 52 aa4.98□□□□□ -1.61
SF3A1-206ENST00000471037 LINC00643Q86TS7 51 aa4.98□□□□□ -1.61
SF3A1-206ENST00000471037 SIGMAR1Q99720 223 aa4.98□□□□□ -1.61
SF3A1-206ENST00000471037 FSIP2Q5CZC0 6907 aa4.98□□□□□ -1.61
SF3A1-206ENST00000471037 ATP5EP2Q5VTU8 51 aa4.97□□□□□ -1.61
SF3A1-206ENST00000471037 CXCL6P80162 114 aa4.96□□□□□ -1.62
SF3A1-206ENST00000471037 DEFB116Q30KQ4 102 aa4.96□□□□□ -1.62
SF3A1-206ENST00000471037 A8MWP4 228 aa4.95□□□□□ -1.62
SF3A1-206ENST00000471037 MT1HP80294 61 aa4.95□□□□□ -1.62
SF3A1-206ENST00000471037 NDUFB1O75438 58 aa4.94□□□□□ -1.62
SF3A1-206ENST00000471037 DSCR10P59022 87 aa4.94□□□□□ -1.62
SF3A1-206ENST00000471037 IGKV3D-7A0A0C4DH55 119 aa4.92□□□□□ -1.62
SF3A1-206ENST00000471037 A0A1B0GVX0 72 aa4.92□□□□□ -1.62
SF3A1-206ENST00000471037 K7EQZ3 153 aa4.91□□□□□ -1.62
SF3A1-206ENST00000471037 PCOTHQ58A44 107 aa4.91□□□□□ -1.62
SF3A1-206ENST00000471037 PRR15Q8IV56 129 aa4.91□□□□□ -1.62
SF3A1-206ENST00000471037 C8orf87E5RJ46 101 aa4.9□□□□□ -1.63
SF3A1-206ENST00000471037 IGHV6-1A0A0B4J1U7 121 aa4.89□□□□□ -1.63
SF3A1-206ENST00000471037 LINC00313P59037 77 aa4.88□□□□□ -1.63
SF3A1-206ENST00000471037 KRTAP10-6P60371 365 aaPredicted RBP4.88□□□□□ -1.63
SF3A1-206ENST00000471037 Q8N9L7 120 aa4.88□□□□□ -1.63
SF3A1-206ENST00000471037 IMUPQ9GZP8 106 aa4.88□□□□□ -1.63
SF3A1-206ENST00000471037 C8orf17Q9NRJ1 99 aa4.87□□□□□ -1.63
SF3A1-206ENST00000471037 C9orf92A6NGG3 77 aa4.86□□□□□ -1.63
SF3A1-206ENST00000471037 MT-ATP8P03928 68 aa4.86□□□□□ -1.63
SF3A1-206ENST00000471037 HIST1H4AP62805 103 aaKnown RBP4.86□□□□□ -1.63
SF3A1-206ENST00000471037 MMP24-AS1A0A0U1RRL7 71 aa4.85□□□□□ -1.63
SF3A1-206ENST00000471037 HCG22E2RYF7 251 aa4.84□□□□□ -1.63
SF3A1-206ENST00000471037 NOTCH2NLQ7Z3S9 236 aa4.84□□□□□ -1.63
SF3A1-206ENST00000471037 hDV103S1A0JD37 113 aa4.83□□□□□ -1.64
SF3A1-206ENST00000471037 TMEM254Q8TBM7 123 aa4.83□□□□□ -1.64
SF3A1-206ENST00000471037 A0A087WVE0 104 aa4.82□□□□□ -1.64
SF3A1-206ENST00000471037 KRTAP16-1A8MUX0 517 aa4.82□□□□□ -1.64
SF3A1-206ENST00000471037 CASC2Q6XLA1 102 aa4.82□□□□□ -1.64
SF3A1-206ENST00000471037 WFDC13Q8IUB5 93 aa4.82□□□□□ -1.64
SF3A1-206ENST00000471037 M0R2T5 61 aa4.81□□□□□ -1.64
SF3A1-206ENST00000471037 MRPL34Q9BQ48 92 aaKnown RBP4.81□□□□□ -1.64
SF3A1-206ENST00000471037 RPL37P61927 97 aaKnown RBP4.8□□□□□ -1.64
SF3A1-206ENST00000471037 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
SF3A1-206ENST00000471037 COX6B2Q6YFQ2 88 aa4.79□□□□□ -1.64
SF3A1-206ENST00000471037 Q8N9P0 234 aaPredicted RBP4.79□□□□□ -1.64
SF3A1-206ENST00000471037 C20orf166-AS1Q96NR2 134 aa4.79□□□□□ -1.64
SF3A1-206ENST00000471037 A8MUU9 505 aa4.78□□□□□ -1.64
SF3A1-206ENST00000471037 Q75L30 129 aa4.78□□□□□ -1.64
SF3A1-206ENST00000471037 FAM236AA0A1B0GUQ0 79 aa4.76□□□□□ -1.65
SF3A1-206ENST00000471037 FAM236BA0A1B0GV22 79 aa4.76□□□□□ -1.65
SF3A1-206ENST00000471037 NDUFS5O43920 106 aa4.75□□□□□ -1.65
SF3A1-206ENST00000471037 SCGB1A1P11684 91 aa4.75□□□□□ -1.65
SF3A1-206ENST00000471037 TP53AIP1Q9HCN2 124 aa4.75□□□□□ -1.65
SF3A1-206ENST00000471037 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
SF3A1-206ENST00000471037 ATP11AUNQ6ZP68 121 aa4.72□□□□□ -1.65
SF3A1-206ENST00000471037 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.71□□□□□ -1.66
SF3A1-206ENST00000471037 ATOX1O00244 68 aa4.71□□□□□ -1.66
SF3A1-206ENST00000471037 UQCRQO14949 82 aa4.71□□□□□ -1.66
SF3A1-206ENST00000471037 SMIM20Q8N5G0 67 aa4.71□□□□□ -1.66
SF3A1-206ENST00000471037 ZCCHC13Q8WW36 166 aaKnown RBP4.71□□□□□ -1.66
SF3A1-206ENST00000471037 OCR1Q9BZK8 76 aa4.7□□□□□ -1.66
SF3A1-206ENST00000471037 TRAV7A0A075B6U4 112 aa4.67□□□□□ -1.66
SF3A1-206ENST00000471037 TRAV22A0A0B4J277 110 aa4.67□□□□□ -1.66
SF3A1-206ENST00000471037 Q5W150 140 aa4.66□□□□□ -1.66
SF3A1-206ENST00000471037 SSPOA2VEC9 5147 aa4.65□□□□□ -1.66
SF3A1-206ENST00000471037 C5orf47Q569G3 176 aa4.65□□□□□ -1.67
SF3A1-206ENST00000471037 KRTAP9-8Q9BYQ0 159 aa4.65□□□□□ -1.67
SF3A1-206ENST00000471037 USH2AO75445 5202 aa4.65□□□□□ -1.67
SF3A1-206ENST00000471037 H0Y9P7 68 aa4.64□□□□□ -1.67
SF3A1-206ENST00000471037 MP68P56378 58 aa4.64□□□□□ -1.67
SF3A1-206ENST00000471037 SERP2Q8N6R1 65 aa4.64□□□□□ -1.67
SF3A1-206ENST00000471037 H3BPC8 53 aa4.63□□□□□ -1.67
SF3A1-206ENST00000471037 LOC101927531A0A1B0GV80 90 aa4.61□□□□□ -1.67
SF3A1-206ENST00000471037 IGKV2-30P06310 120 aa4.61□□□□□ -1.67
SF3A1-206ENST00000471037 C7orf65Q6ZTY9 151 aa4.61□□□□□ -1.67
SF3A1-206ENST00000471037 ANAPC13Q9BS18 74 aa4.61□□□□□ -1.67
SF3A1-206ENST00000471037 SPINK7P58062 85 aa4.6□□□□□ -1.67
SF3A1-206ENST00000471037 IGKV2D-30A0A075B6S6 120 aa4.59□□□□□ -1.67
SF3A1-206ENST00000471037 COX7CP15954 63 aa4.59□□□□□ -1.67
SF3A1-206ENST00000471037 C1orf64Q8NEQ6 169 aa4.59□□□□□ -1.67
SF3A1-206ENST00000471037 LINC00208Q96KT6 92 aa4.59□□□□□ -1.67
SF3A1-206ENST00000471037 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
SF3A1-206ENST00000471037 CYP4F30PQ9H0H9 118 aa4.57□□□□□ -1.68
SF3A1-206ENST00000471037 MT2AP02795 61 aa4.56□□□□□ -1.68
SF3A1-206ENST00000471037 C20orf197Q8N268 126 aa4.55□□□□□ -1.68
SF3A1-206ENST00000471037 KLKP1Q107X0 134 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms