RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 FAM236CP0DP71 79 aa2.96□□□□□ -1.94
GPNMB-208ENST00000470994 SNRPEP62304 92 aaKnown RBP2.96□□□□□ -1.94
GPNMB-208ENST00000470994 COA6Q5JTJ3 125 aaKnown RBP2.96□□□□□ -1.94
GPNMB-208ENST00000470994 SCGB1D1O95968 90 aa2.95□□□□□ -1.94
GPNMB-208ENST00000470994 S100A2P29034 98 aa2.95□□□□□ -1.94
GPNMB-208ENST00000470994 BVES-AS1Q5T3Y7 98 aa2.95□□□□□ -1.94
GPNMB-208ENST00000470994 HIST1H4GQ99525 98 aa2.95□□□□□ -1.94
GPNMB-208ENST00000470994 SS18L2Q9UHA2 77 aa2.95□□□□□ -1.94
GPNMB-208ENST00000470994 A0A087WSZ3 146 aa2.94□□□□□ -1.94
GPNMB-208ENST00000470994 PRAC1Q96KF2 57 aa2.94□□□□□ -1.94
GPNMB-208ENST00000470994 FABP2P12104 132 aa2.93□□□□□ -1.94
GPNMB-208ENST00000470994 NDUFV3P56181 108 aaKnown RBP2.93□□□□□ -1.94
GPNMB-208ENST00000470994 TEN1Q86WV5 123 aa2.93□□□□□ -1.94
GPNMB-208ENST00000470994 PPDPFLQ8WWR9 84 aa2.93□□□□□ -1.94
GPNMB-208ENST00000470994 RAB37Q96AX2 223 aa2.93□□□□□ -1.94
GPNMB-208ENST00000470994 SIGMAR1Q99720 223 aa2.93□□□□□ -1.94
GPNMB-208ENST00000470994 A8MUU9 505 aa2.92□□□□□ -1.94
GPNMB-208ENST00000470994 H3BMG7 143 aa2.92□□□□□ -1.94
GPNMB-208ENST00000470994 C20orf166-AS1Q96NR2 134 aa2.92□□□□□ -1.94
GPNMB-208ENST00000470994 H0YGX0 51 aa2.91□□□□□ -1.94
GPNMB-208ENST00000470994 LINC00313P59037 77 aa2.91□□□□□ -1.94
GPNMB-208ENST00000470994 HIST1H2BLQ99880 126 aa2.91□□□□□ -1.94
GPNMB-208ENST00000470994 A0A1B0GV72 72 aa2.9□□□□□ -1.95
GPNMB-208ENST00000470994 IGKV4-1P06312 121 aa2.9□□□□□ -1.95
GPNMB-208ENST00000470994 S100A6P06703 90 aa2.9□□□□□ -1.95
GPNMB-208ENST00000470994 KRTAP10-10P60014 251 aa2.9□□□□□ -1.95
GPNMB-208ENST00000470994 HIST3H2BBQ8N257 126 aa2.9□□□□□ -1.95
GPNMB-208ENST00000470994 RBM12B-AS1Q9P1G2 102 aa2.9□□□□□ -1.95
GPNMB-208ENST00000470994 MT2AP02795 61 aa2.89□□□□□ -1.95
GPNMB-208ENST00000470994 DEFB116Q30KQ4 102 aa2.89□□□□□ -1.95
GPNMB-208ENST00000470994 FAM218AQ96MZ4 157 aa2.89□□□□□ -1.95
GPNMB-208ENST00000470994 A0A1W2PNM2 257 aa2.88□□□□□ -1.95
GPNMB-208ENST00000470994 COX8AP10176 69 aa2.88□□□□□ -1.95
GPNMB-208ENST00000470994 ANKRD29Q8N6D5 301 aa2.88□□□□□ -1.95
GPNMB-208ENST00000470994 C14orf144Q96I85 54 aa2.88□□□□□ -1.95
GPNMB-208ENST00000470994 FLGP20930 4061 aaPredicted RBP2.87□□□□□ -1.95
GPNMB-208ENST00000470994 IGHV6-1A0A0B4J1U7 121 aa2.87□□□□□ -1.95
GPNMB-208ENST00000470994 A0A0B4J2C4 111 aa2.86□□□□□ -1.95
GPNMB-208ENST00000470994 MT1FP04733 61 aa2.86□□□□□ -1.95
GPNMB-208ENST00000470994 A0A1B0GX51 115 aa2.85□□□□□ -1.95
GPNMB-208ENST00000470994 DLEU1O43261 78 aa2.85□□□□□ -1.95
GPNMB-208ENST00000470994 DNAL4O96015 105 aa2.85□□□□□ -1.95
GPNMB-208ENST00000470994 TRACP01848 142 aa2.85□□□□□ -1.95
GPNMB-208ENST00000470994 HRES1P13985 223 aa2.85□□□□□ -1.95
GPNMB-208ENST00000470994 PSMB2P49721 201 aa2.85□□□□□ -1.95
GPNMB-208ENST00000470994 SPATA45Q537H7 98 aa2.85□□□□□ -1.95
GPNMB-208ENST00000470994 MTURNQ8N3F0 131 aa2.85□□□□□ -1.95
GPNMB-208ENST00000470994 VPS25Q9BRG1 176 aa2.85□□□□□ -1.95
GPNMB-208ENST00000470994 PRO1854Q9UHT4 67 aa2.85□□□□□ -1.95
GPNMB-208ENST00000470994 CCKP06307 115 aa2.84□□□□□ -1.95
GPNMB-208ENST00000470994 S100A1P23297 94 aa2.84□□□□□ -1.95
GPNMB-208ENST00000470994 CEND1Q8N111 149 aa2.84□□□□□ -1.95
GPNMB-208ENST00000470994 LINC00846Q9NV44 126 aa2.84□□□□□ -1.95
GPNMB-208ENST00000470994 ORMDL1Q9P0S3 153 aa2.84□□□□□ -1.95
GPNMB-208ENST00000470994 HIGD1BQ9P298 99 aa2.84□□□□□ -1.95
GPNMB-208ENST00000470994 TRBV7-4A0A0J9YYF1 115 aa2.83□□□□□ -1.96
GPNMB-208ENST00000470994 LYRM7Q5U5X0 104 aa2.83□□□□□ -1.96
GPNMB-208ENST00000470994 PP632Q6XCG6 107 aa2.83□□□□□ -1.96
GPNMB-208ENST00000470994 LINC00472Q9H8W2 130 aa2.83□□□□□ -1.96
GPNMB-208ENST00000470994 USH2AO75445 5202 aa2.83□□□□□ -1.96
GPNMB-208ENST00000470994 H3BQ85 93 aa2.82□□□□□ -1.96
GPNMB-208ENST00000470994 TMEM256-PLSCR3K7ERE1 68 aa2.82□□□□□ -1.96
GPNMB-208ENST00000470994 COX6CP09669 75 aa2.82□□□□□ -1.96
GPNMB-208ENST00000470994 FXYD2P54710 66 aa2.82□□□□□ -1.96
GPNMB-208ENST00000470994 SPINK7P58062 85 aa2.82□□□□□ -1.96
GPNMB-208ENST00000470994 C2orf91Q6ZV80 131 aa2.82□□□□□ -1.96
GPNMB-208ENST00000470994 VAMP8Q9BV40 100 aa2.82□□□□□ -1.96
GPNMB-208ENST00000470994 SSPOA2VEC9 5147 aa2.82□□□□□ -1.96
GPNMB-208ENST00000470994 A0A1B0GVX0 72 aa2.81□□□□□ -1.96
GPNMB-208ENST00000470994 C8orf87E5RJ46 101 aa2.81□□□□□ -1.96
GPNMB-208ENST00000470994 SCGB1C2P0DMR2 95 aa2.81□□□□□ -1.96
GPNMB-208ENST00000470994 ZCCHC13Q8WW36 166 aaKnown RBP2.81□□□□□ -1.96
GPNMB-208ENST00000470994 K7ERJ3 54 aa2.8□□□□□ -1.96
GPNMB-208ENST00000470994 RBM3P98179 157 aaKnown RBP2.8□□□□□ -1.96
GPNMB-208ENST00000470994 SYNE2Q8WXH0 6885 aaKnown RBP2.79□□□□□ -1.96
GPNMB-208ENST00000470994 NDUFB1O75438 58 aa2.79□□□□□ -1.96
GPNMB-208ENST00000470994 DSCR8Q96T75 97 aa2.79□□□□□ -1.96
GPNMB-208ENST00000470994 FCGBPQ9Y6R7 5405 aaPredicted RBP2.79□□□□□ -1.96
GPNMB-208ENST00000470994 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
GPNMB-208ENST00000470994 A8MWP4 228 aa2.78□□□□□ -1.96
GPNMB-208ENST00000470994 UBE2V1Q13404 147 aa2.78□□□□□ -1.96
GPNMB-208ENST00000470994 WFDC13Q8IUB5 93 aa2.78□□□□□ -1.96
GPNMB-208ENST00000470994 C9JAW5 83 aa2.77□□□□□ -1.97
GPNMB-208ENST00000470994 J3KT08 172 aa2.77□□□□□ -1.97
GPNMB-208ENST00000470994 BAALC-AS2P0C853 105 aa2.77□□□□□ -1.97
GPNMB-208ENST00000470994 HSD52Q0P140 79 aa2.77□□□□□ -1.97
GPNMB-208ENST00000470994 MACF1Q9UPN3 7388 aaKnown RBP2.76□□□□□ -1.97
GPNMB-208ENST00000470994 KRTAP19-6Q3LI70 58 aa2.76□□□□□ -1.97
GPNMB-208ENST00000470994 C8orf17Q9NRJ1 99 aa2.75□□□□□ -1.97
GPNMB-208ENST00000470994 IGKV3D-7A0A0C4DH55 119 aa2.74□□□□□ -1.97
GPNMB-208ENST00000470994 Q6ZQT0 140 aa2.74□□□□□ -1.97
GPNMB-208ENST00000470994 NDUFS5O43920 106 aa2.73□□□□□ -1.97
GPNMB-208ENST00000470994 Q6ZVQ6 151 aa2.73□□□□□ -1.97
GPNMB-208ENST00000470994 H1FX-AS1Q4G0G2 97 aa2.72□□□□□ -1.97
GPNMB-208ENST00000470994 UQCR10Q9UDW1 63 aa2.72□□□□□ -1.97
GPNMB-208ENST00000470994 ATXN8Q156A1 80 aa2.71□□□□□ -1.98
GPNMB-208ENST00000470994 NREPQ16612 68 aa2.71□□□□□ -1.98
GPNMB-208ENST00000470994 KRTAP6-3Q3LI67 103 aa2.71□□□□□ -1.98
GPNMB-208ENST00000470994 PYY3Q5JQD4 70 aa2.71□□□□□ -1.98
GPNMB-208ENST00000470994 JMJD7-PLA2G4BH0Y9G9 81 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms