RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 MAP3K1Q13233 1512 aa-0.31□□□□□ -2.46
HERC3-208ENST00000470815 PDCD5O14737 125 aa-0.31□□□□□ -2.46
HERC3-208ENST00000470815 RPS27P42677 84 aaKnown RBP-0.31□□□□□ -2.46
HERC3-208ENST00000470815 WT1-ASQ06250 92 aa-0.31□□□□□ -2.46
HERC3-208ENST00000470815 RPS27LQ71UM5 84 aaKnown RBP-0.31□□□□□ -2.46
HERC3-208ENST00000470815 MUC17Q685J3 4493 aa-0.31□□□□□ -2.46
HERC3-208ENST00000470815 EPG5Q9HCE0 2579 aa-0.31□□□□□ -2.46
HERC3-208ENST00000470815 KALRNO60229 2985 aa-0.31□□□□□ -2.46
HERC3-208ENST00000470815 DNAH2Q9P225 4427 aa-0.31□□□□□ -2.46
HERC3-208ENST00000470815 WDR87Q6ZQQ6 2873 aa-0.32□□□□□ -2.46
HERC3-208ENST00000470815 MINOS1Q5TGZ0 78 aa-0.32□□□□□ -2.46
HERC3-208ENST00000470815 NCBP2-AS2Q69YL0 99 aa-0.32□□□□□ -2.46
HERC3-208ENST00000470815 GNG13Q9P2W3 67 aa-0.32□□□□□ -2.46
HERC3-208ENST00000470815 MYO18BQ8IUG5 2567 aa-0.32□□□□□ -2.46
HERC3-208ENST00000470815 HFM1A2PYH4 1435 aa-0.32□□□□□ -2.46
HERC3-208ENST00000470815 LAMA3Q16787 3333 aa-0.32□□□□□ -2.46
HERC3-208ENST00000470815 CDC42BPGQ6DT37 1551 aa-0.32□□□□□ -2.46
HERC3-208ENST00000470815 DNAH6Q9C0G6 4158 aa-0.33□□□□□ -2.46
HERC3-208ENST00000470815 DNAH3Q8TD57 4116 aa-0.33□□□□□ -2.46
HERC3-208ENST00000470815 PKD1L2Q7Z442 2459 aa-0.33□□□□□ -2.46
HERC3-208ENST00000470815 LAMA1P25391 3075 aa-0.33□□□□□ -2.46
HERC3-208ENST00000470815 ITSN1Q15811 1721 aa-0.33□□□□□ -2.46
HERC3-208ENST00000470815 ANKRD11Q6UB99 2663 aaPredicted RBP-0.33□□□□□ -2.46
HERC3-208ENST00000470815 UGGT2Q9NYU1 1516 aa-0.33□□□□□ -2.46
HERC3-208ENST00000470815 VPS13BQ7Z7G8 4022 aa-0.34□□□□□ -2.46
HERC3-208ENST00000470815 IQGAP3Q86VI3 1631 aa-0.34□□□□□ -2.46
HERC3-208ENST00000470815 AKAP9Q99996 3911 aa-0.34□□□□□ -2.46
HERC3-208ENST00000470815 GCN1Q92616 2671 aaKnown RBP-0.34□□□□□ -2.46
HERC3-208ENST00000470815 SFTA3P0C7M3 94 aa-0.34□□□□□ -2.46
HERC3-208ENST00000470815 DEFB110Q30KQ9 67 aa-0.34□□□□□ -2.46
HERC3-208ENST00000470815 KRTAP19-6Q3LI70 58 aa-0.34□□□□□ -2.46
HERC3-208ENST00000470815 MYO5CQ9NQX4 1742 aa-0.34□□□□□ -2.46
HERC3-208ENST00000470815 ANK3Q12955 4377 aaKnown RBP-0.34□□□□□ -2.46
HERC3-208ENST00000470815 DNAH1Q9P2D7 4330 aa-0.34□□□□□ -2.46
HERC3-208ENST00000470815 ZC3H13Q5T200 1668 aaKnown RBP-0.34□□□□□ -2.46
HERC3-208ENST00000470815 DUOX2Q9NRD8 1548 aa-0.34□□□□□ -2.46
HERC3-208ENST00000470815 TRIOO75962 3097 aa-0.34□□□□□ -2.46
HERC3-208ENST00000470815 DNAH5Q8TE73 4624 aa-0.34□□□□□ -2.46
HERC3-208ENST00000470815 RNF17Q9BXT8 1623 aaKnown RBP-0.35□□□□□ -2.46
HERC3-208ENST00000470815 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.35□□□□□ -2.46
HERC3-208ENST00000470815 ITPR2Q14571 2701 aa-0.35□□□□□ -2.46
HERC3-208ENST00000470815 PKHD1L1Q86WI1 4243 aa-0.35□□□□□ -2.46
HERC3-208ENST00000470815 NRAPQ86VF7 1730 aa-0.35□□□□□ -2.47
HERC3-208ENST00000470815 MTORP42345 2549 aa-0.35□□□□□ -2.47
HERC3-208ENST00000470815 MGAM2Q2M2H8 2515 aa-0.35□□□□□ -2.47
HERC3-208ENST00000470815 LINC01549A6NIU2 74 aa-0.35□□□□□ -2.47
HERC3-208ENST00000470815 FCER1GP30273 86 aa-0.35□□□□□ -2.47
HERC3-208ENST00000470815 ASXL1Q8IXJ9 1541 aa-0.35□□□□□ -2.47
HERC3-208ENST00000470815 SACSQ9NZJ4 4579 aa-0.35□□□□□ -2.47
HERC3-208ENST00000470815 LRRIQ1Q96JM4 1722 aa-0.35□□□□□ -2.47
HERC3-208ENST00000470815 BPTFQ12830 3046 aa-0.36□□□□□ -2.47
HERC3-208ENST00000470815 ITPR1Q14643 2758 aa-0.36□□□□□ -2.47
HERC3-208ENST00000470815 ABCC6O95255 1503 aa-0.36□□□□□ -2.47
HERC3-208ENST00000470815 KIAA0586Q9BVV6 1533 aa-0.36□□□□□ -2.47
HERC3-208ENST00000470815 C6orf48Q9UBA6 75 aa-0.36□□□□□ -2.47
HERC3-208ENST00000470815 DNAH9Q9NYC9 4486 aa-0.36□□□□□ -2.47
HERC3-208ENST00000470815 PARP4Q9UKK3 1724 aaKnown RBP-0.36□□□□□ -2.47
HERC3-208ENST00000470815 ITPR3Q14573 2671 aa-0.36□□□□□ -2.47
HERC3-208ENST00000470815 APOBP04114 4563 aaKnown RBP-0.37□□□□□ -2.47
HERC3-208ENST00000470815 NBEAQ8NFP9 2946 aa-0.37□□□□□ -2.47
HERC3-208ENST00000470815 UTP20O75691 2785 aaKnown RBP-0.37□□□□□ -2.47
HERC3-208ENST00000470815 IGLV5-48A0A075B6I7 105 aa-0.37□□□□□ -2.47
HERC3-208ENST00000470815 DEFB114Q30KQ6 69 aa-0.37□□□□□ -2.47
HERC3-208ENST00000470815 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.37□□□□□ -2.47
HERC3-208ENST00000470815 VPS13DQ5THJ4 4388 aa-0.37□□□□□ -2.47
HERC3-208ENST00000470815 CEP290O15078 2479 aa-0.37□□□□□ -2.47
HERC3-208ENST00000470815 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.37□□□□□ -2.47
HERC3-208ENST00000470815 INO80Q9ULG1 1556 aaPredicted RBP-0.37□□□□□ -2.47
HERC3-208ENST00000470815 ACACAQ13085 2346 aa-0.37□□□□□ -2.47
HERC3-208ENST00000470815 ITSN2Q9NZM3 1697 aa-0.37□□□□□ -2.47
HERC3-208ENST00000470815 ANKRD36CQ5JPF3 1778 aa-0.37□□□□□ -2.47
HERC3-208ENST00000470815 CMYA5Q8N3K9 4069 aa-0.38□□□□□ -2.47
HERC3-208ENST00000470815 ACACBO00763 2458 aa-0.38□□□□□ -2.47
HERC3-208ENST00000470815 ABCA9Q8IUA7 1624 aa-0.38□□□□□ -2.47
HERC3-208ENST00000470815 ZFHX4Q86UP3 3567 aa-0.38□□□□□ -2.47
HERC3-208ENST00000470815 SMG1Q96Q15 3661 aaKnown RBP-0.38□□□□□ -2.47
HERC3-208ENST00000470815 DNMBPQ6XZF7 1577 aa-0.38□□□□□ -2.47
HERC3-208ENST00000470815 LRRK2Q5S007 2527 aa-0.38□□□□□ -2.47
HERC3-208ENST00000470815 CCDC168Q8NDH2 2452 aa-0.39□□□□□ -2.47
HERC3-208ENST00000470815 THOC2Q8NI27 1593 aaKnown RBP-0.39□□□□□ -2.47
HERC3-208ENST00000470815 SPENQ96T58 3664 aaKnown RBP-0.39□□□□□ -2.47
HERC3-208ENST00000470815 K7EMI3 77 aa-0.39□□□□□ -2.47
HERC3-208ENST00000470815 KRTAP19-5Q3LI72 72 aa-0.39□□□□□ -2.47
HERC3-208ENST00000470815 TRRAPQ9Y4A5 3859 aa-0.39□□□□□ -2.47
HERC3-208ENST00000470815 TOGARAM1Q9Y4F4 1720 aa-0.39□□□□□ -2.47
HERC3-208ENST00000470815 RANBP2P49792 3224 aaKnown RBP-0.4□□□□□ -2.47
HERC3-208ENST00000470815 TEX15Q9BXT5 2789 aa-0.4□□□□□ -2.47
HERC3-208ENST00000470815 M0R1W7 72 aa-0.4□□□□□ -2.47
HERC3-208ENST00000470815 MADDQ8WXG6 1647 aa-0.4□□□□□ -2.47
HERC3-208ENST00000470815 A0A0C4DFX4 3053 aa-0.4□□□□□ -2.47
HERC3-208ENST00000470815 FAM186AA6NE01 2351 aa-0.4□□□□□ -2.47
HERC3-208ENST00000470815 SRCAPQ6ZRS2 3230 aa-0.4□□□□□ -2.47
HERC3-208ENST00000470815 KIF1AQ12756 1690 aa-0.4□□□□□ -2.47
HERC3-208ENST00000470815 NHSQ6T4R5 1651 aa-0.4□□□□□ -2.47
HERC3-208ENST00000470815 CEP295Q9C0D2 2601 aa-0.41□□□□□ -2.47
HERC3-208ENST00000470815 MMP24-AS1A0A0U1RRL7 71 aa-0.41□□□□□ -2.48
HERC3-208ENST00000470815 H3BUA1 57 aa-0.41□□□□□ -2.48
HERC3-208ENST00000470815 DMXL2Q8TDJ6 3036 aa-0.41□□□□□ -2.48
HERC3-208ENST00000470815 SCRIBQ14160 1630 aa-0.42□□□□□ -2.48
HERC3-208ENST00000470815 CHD7Q9P2D1 2997 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms