RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 SPANXDQ9BXN6 97 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 SPANXCQ9NY87 97 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 VPS13BQ7Z7G8 4022 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 HMCN2Q8NDA2 5059 aa1.3□□□□□ -2.2
UBXN4-206ENST00000470687 LRP1Q07954 4544 aaKnown RBP1.3□□□□□ -2.2
UBXN4-206ENST00000470687 A8MUN3 132 aa1.29□□□□□ -2.2
UBXN4-206ENST00000470687 H7C2G1 150 aa1.29□□□□□ -2.2
UBXN4-206ENST00000470687 IGKCP01834 107 aa1.29□□□□□ -2.2
UBXN4-206ENST00000470687 APOC3P02656 99 aa1.29□□□□□ -2.2
UBXN4-206ENST00000470687 C9orf153Q5TBE3 101 aa1.29□□□□□ -2.2
UBXN4-206ENST00000470687 Q6JHZ5 121 aa1.29□□□□□ -2.2
UBXN4-206ENST00000470687 PPDPFLQ8WWR9 84 aa1.29□□□□□ -2.2
UBXN4-206ENST00000470687 TRAV13-2A0A0B4J235 113 aa1.28□□□□□ -2.2
UBXN4-206ENST00000470687 NCR3O14931 201 aa1.28□□□□□ -2.2
UBXN4-206ENST00000470687 ELOF1P60002 83 aaKnown RBP1.28□□□□□ -2.2
UBXN4-206ENST00000470687 KRTAP6-3Q3LI67 103 aa1.28□□□□□ -2.2
UBXN4-206ENST00000470687 OCIAD2Q56VL3 154 aa1.28□□□□□ -2.2
UBXN4-206ENST00000470687 LYRM7Q5U5X0 104 aa1.28□□□□□ -2.2
UBXN4-206ENST00000470687 LINC01545Q5VT33 79 aa1.28□□□□□ -2.2
UBXN4-206ENST00000470687 ATP11AUNQ6ZP68 121 aa1.28□□□□□ -2.2
UBXN4-206ENST00000470687 OR13C6PQ8NH95 151 aa1.28□□□□□ -2.2
UBXN4-206ENST00000470687 Q9BRP9 147 aa1.28□□□□□ -2.2
UBXN4-206ENST00000470687 CRCT1Q9UGL9 99 aa1.28□□□□□ -2.2
UBXN4-206ENST00000470687 FAT3Q8TDW7 4589 aa1.28□□□□□ -2.2
UBXN4-206ENST00000470687 LRP2P98164 4655 aa1.28□□□□□ -2.2
UBXN4-206ENST00000470687 IGLV5-48A0A075B6I7 105 aa1.27□□□□□ -2.21
UBXN4-206ENST00000470687 TRBV20-1A0A075B6N2 111 aa1.27□□□□□ -2.21
UBXN4-206ENST00000470687 C20orf202A1L168 122 aa1.27□□□□□ -2.21
UBXN4-206ENST00000470687 F8WEM9 126 aa1.27□□□□□ -2.21
UBXN4-206ENST00000470687 SYS1-DBNDD2H3BUS1 97 aa1.27□□□□□ -2.21
UBXN4-206ENST00000470687 ERC2-IT1O76042 136 aa1.27□□□□□ -2.21
UBXN4-206ENST00000470687 TRGC2P03986 189 aa1.27□□□□□ -2.21
UBXN4-206ENST00000470687 COX7BP24311 80 aa1.27□□□□□ -2.21
UBXN4-206ENST00000470687 PMCHL1Q16048 86 aa1.27□□□□□ -2.21
UBXN4-206ENST00000470687 Q8NDZ9 215 aa1.27□□□□□ -2.21
UBXN4-206ENST00000470687 LINC00308Q8TCZ7 52 aa1.27□□□□□ -2.21
UBXN4-206ENST00000470687 TTTY13Q9BZ97 58 aa1.27□□□□□ -2.21
UBXN4-206ENST00000470687 TRAV7A0A075B6U4 112 aa1.26□□□□□ -2.21
UBXN4-206ENST00000470687 H3BT86 120 aa1.26□□□□□ -2.21
UBXN4-206ENST00000470687 M0R2T5 61 aa1.26□□□□□ -2.21
UBXN4-206ENST00000470687 FABP4P15090 132 aa1.26□□□□□ -2.21
UBXN4-206ENST00000470687 RPL37P61927 97 aaKnown RBP1.26□□□□□ -2.21
UBXN4-206ENST00000470687 BVES-AS1Q5T3Y7 98 aa1.26□□□□□ -2.21
UBXN4-206ENST00000470687 SOSTDC1Q6X4U4 206 aa1.26□□□□□ -2.21
UBXN4-206ENST00000470687 COX6B2Q6YFQ2 88 aa1.26□□□□□ -2.21
UBXN4-206ENST00000470687 KTN1-AS1Q86SY8 53 aa1.26□□□□□ -2.21
UBXN4-206ENST00000470687 C12orf57Q99622 126 aa1.26□□□□□ -2.21
UBXN4-206ENST00000470687 LINC00846Q9NV44 126 aa1.26□□□□□ -2.21
UBXN4-206ENST00000470687 SS18L2Q9UHA2 77 aa1.26□□□□□ -2.21
UBXN4-206ENST00000470687 FAM236DA0A1B0GTK5 79 aa1.25□□□□□ -2.21
UBXN4-206ENST00000470687 hADV29S1A0JD25 119 aa1.25□□□□□ -2.21
UBXN4-206ENST00000470687 H0YGX0 51 aa1.25□□□□□ -2.21
UBXN4-206ENST00000470687 FAM236CP0DP71 79 aa1.25□□□□□ -2.21
UBXN4-206ENST00000470687 FXYD2P54710 66 aa1.25□□□□□ -2.21
UBXN4-206ENST00000470687 PCOTHQ58A44 107 aa1.25□□□□□ -2.21
UBXN4-206ENST00000470687 Q6Q795 121 aa1.25□□□□□ -2.21
UBXN4-206ENST00000470687 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.25□□□□□ -2.21
UBXN4-206ENST00000470687 DEFB105AQ8NG35 78 aa1.25□□□□□ -2.21
UBXN4-206ENST00000470687 CLEC2BQ92478 149 aa1.25□□□□□ -2.21
UBXN4-206ENST00000470687 SNHG12Q9BXW3 62 aa1.25□□□□□ -2.21
UBXN4-206ENST00000470687 MUC2Q02817 5179 aa1.25□□□□□ -2.21
UBXN4-206ENST00000470687 TRBV7-7A0A0K0K1E9 115 aa1.24□□□□□ -2.21
UBXN4-206ENST00000470687 A0A1B0GX51 115 aa1.24□□□□□ -2.21
UBXN4-206ENST00000470687 MT1HP80294 61 aa1.24□□□□□ -2.21
UBXN4-206ENST00000470687 LINC00575Q6W349 94 aa1.24□□□□□ -2.21
UBXN4-206ENST00000470687 TEN1Q86WV5 123 aa1.24□□□□□ -2.21
UBXN4-206ENST00000470687 HIST3H2BBQ8N257 126 aa1.24□□□□□ -2.21
UBXN4-206ENST00000470687 KRTAP4-1Q9BYQ7 146 aa1.24□□□□□ -2.21
UBXN4-206ENST00000470687 C9orf92A6NGG3 77 aa1.23□□□□□ -2.21
UBXN4-206ENST00000470687 HIST1H2BKO60814 126 aa1.23□□□□□ -2.21
UBXN4-206ENST00000470687 HIST1H2BJP06899 126 aa1.23□□□□□ -2.21
UBXN4-206ENST00000470687 C3orf79P0CE67 100 aa1.23□□□□□ -2.21
UBXN4-206ENST00000470687 KRTAP19-2Q3LHN2 52 aa1.23□□□□□ -2.21
UBXN4-206ENST00000470687 HRCT1Q6UXD1 115 aa1.23□□□□□ -2.21
UBXN4-206ENST00000470687 MUSTN1Q8IVN3 82 aa1.23□□□□□ -2.21
UBXN4-206ENST00000470687 SMIM11BQ8TCY0 68 aa1.23□□□□□ -2.21
UBXN4-206ENST00000470687 IMUPQ9GZP8 106 aa1.23□□□□□ -2.21
UBXN4-206ENST00000470687 DNAH8Q96JB1 4490 aa1.23□□□□□ -2.21
UBXN4-206ENST00000470687 FSIP2Q5CZC0 6907 aa1.22□□□□□ -2.21
UBXN4-206ENST00000470687 TMEM256-PLSCR3K7ERE1 68 aa1.22□□□□□ -2.21
UBXN4-206ENST00000470687 DLEU1O43261 78 aa1.22□□□□□ -2.21
UBXN4-206ENST00000470687 COX6CP09669 75 aa1.22□□□□□ -2.21
UBXN4-206ENST00000470687 KRTDAPP60985 99 aa1.22□□□□□ -2.21
UBXN4-206ENST00000470687 NPC2P61916 151 aa1.22□□□□□ -2.21
UBXN4-206ENST00000470687 Q6ZQY7 126 aa1.22□□□□□ -2.21
UBXN4-206ENST00000470687 PMCHL2Q9BQD1 86 aa1.22□□□□□ -2.21
UBXN4-206ENST00000470687 TRBV7-4A0A0J9YYF1 115 aa1.21□□□□□ -2.22
UBXN4-206ENST00000470687 A0A1B0GV72 72 aa1.21□□□□□ -2.22
UBXN4-206ENST00000470687 J3KT08 172 aa1.21□□□□□ -2.22
UBXN4-206ENST00000470687 OBSCN-AS1Q96MR7 158 aa1.21□□□□□ -2.22
UBXN4-206ENST00000470687 Q96NJ1 140 aa1.21□□□□□ -2.22
UBXN4-206ENST00000470687 HIST1H2BLQ99880 126 aa1.21□□□□□ -2.22
UBXN4-206ENST00000470687 TNXBP22105 4242 aa1.21□□□□□ -2.22
UBXN4-206ENST00000470687 PKHD1L1Q86WI1 4243 aa1.2□□□□□ -2.22
UBXN4-206ENST00000470687 H3BMG7 143 aa1.2□□□□□ -2.22
UBXN4-206ENST00000470687 DNAL4O96015 105 aa1.2□□□□□ -2.22
UBXN4-206ENST00000470687 PDE6GP18545 87 aa1.2□□□□□ -2.22
UBXN4-206ENST00000470687 LCA10Q71F78 164 aa1.2□□□□□ -2.22
UBXN4-206ENST00000470687 RAB37Q96AX2 223 aa1.2□□□□□ -2.22
UBXN4-206ENST00000470687 PRO2289Q9P1D8 64 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms