RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.54□□□□□ -1.84
PTP4A1-202ENST00000470661 CEND1Q8N111 149 aa3.54□□□□□ -1.84
PTP4A1-202ENST00000470661 CLEC2BQ92478 149 aa3.54□□□□□ -1.84
PTP4A1-202ENST00000470661 HIGD1BQ9P298 99 aa3.54□□□□□ -1.84
PTP4A1-202ENST00000470661 TRBV7-7A0A0K0K1E9 115 aa3.53□□□□□ -1.84
PTP4A1-202ENST00000470661 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
PTP4A1-202ENST00000470661 A0A0B4J2C4 111 aa3.52□□□□□ -1.85
PTP4A1-202ENST00000470661 TCL1BO95988 128 aa3.52□□□□□ -1.85
PTP4A1-202ENST00000470661 FABP2P12104 132 aa3.52□□□□□ -1.85
PTP4A1-202ENST00000470661 BVES-AS1Q5T3Y7 98 aa3.52□□□□□ -1.85
PTP4A1-202ENST00000470661 Q5XG85 94 aa3.52□□□□□ -1.85
PTP4A1-202ENST00000470661 OBSCN-AS1Q96MR7 158 aa3.52□□□□□ -1.85
PTP4A1-202ENST00000470661 PRO1854Q9UHT4 67 aa3.52□□□□□ -1.85
PTP4A1-202ENST00000470661 FLGP20930 4061 aaPredicted RBP3.5□□□□□ -1.85
PTP4A1-202ENST00000470661 RPL37P61927 97 aaKnown RBP3.5□□□□□ -1.85
PTP4A1-202ENST00000470661 MT1HP80294 61 aa3.5□□□□□ -1.85
PTP4A1-202ENST00000470661 Q6JHZ5 121 aa3.5□□□□□ -1.85
PTP4A1-202ENST00000470661 A0A087WSZ3 146 aa3.49□□□□□ -1.85
PTP4A1-202ENST00000470661 A0A1W2PNM2 257 aa3.49□□□□□ -1.85
PTP4A1-202ENST00000470661 H0YGX0 51 aa3.49□□□□□ -1.85
PTP4A1-202ENST00000470661 H3BMG7 143 aa3.49□□□□□ -1.85
PTP4A1-202ENST00000470661 PSMB2P49721 201 aa3.49□□□□□ -1.85
PTP4A1-202ENST00000470661 DEFB116Q30KQ4 102 aa3.49□□□□□ -1.85
PTP4A1-202ENST00000470661 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
PTP4A1-202ENST00000470661 LST1O00453 97 aa3.48□□□□□ -1.85
PTP4A1-202ENST00000470661 Q96NJ1 140 aa3.48□□□□□ -1.85
PTP4A1-202ENST00000470661 NAA38Q9BRA0 125 aaKnown RBP3.48□□□□□ -1.85
PTP4A1-202ENST00000470661 HSD52Q0P140 79 aa3.47□□□□□ -1.85
PTP4A1-202ENST00000470661 Q6Q795 121 aa3.47□□□□□ -1.85
PTP4A1-202ENST00000470661 TEN1Q86WV5 123 aa3.45□□□□□ -1.86
PTP4A1-202ENST00000470661 PPDPFLQ8WWR9 84 aa3.45□□□□□ -1.86
PTP4A1-202ENST00000470661 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
PTP4A1-202ENST00000470661 UQCR10Q9UDW1 63 aa3.45□□□□□ -1.86
PTP4A1-202ENST00000470661 SNCGO76070 127 aa3.44□□□□□ -1.86
PTP4A1-202ENST00000470661 SCGB1C2P0DMR2 95 aa3.44□□□□□ -1.86
PTP4A1-202ENST00000470661 COX6B2Q6YFQ2 88 aa3.44□□□□□ -1.86
PTP4A1-202ENST00000470661 ANKRD29Q8N6D5 301 aa3.44□□□□□ -1.86
PTP4A1-202ENST00000470661 VPS25Q9BRG1 176 aa3.44□□□□□ -1.86
PTP4A1-202ENST00000470661 ORMDL1Q9P0S3 153 aa3.44□□□□□ -1.86
PTP4A1-202ENST00000470661 ATP11AUNQ6ZP68 121 aa3.43□□□□□ -1.86
PTP4A1-202ENST00000470661 SIGMAR1Q99720 223 aa3.43□□□□□ -1.86
PTP4A1-202ENST00000470661 M0R2T5 61 aa3.42□□□□□ -1.86
PTP4A1-202ENST00000470661 DNAL4O96015 105 aa3.42□□□□□ -1.86
PTP4A1-202ENST00000470661 IGKV4-1P06312 121 aa3.42□□□□□ -1.86
PTP4A1-202ENST00000470661 A0A1B0GX51 115 aa3.41□□□□□ -1.86
PTP4A1-202ENST00000470661 CCKP06307 115 aa3.41□□□□□ -1.86
PTP4A1-202ENST00000470661 BAALC-AS2P0C853 105 aa3.41□□□□□ -1.86
PTP4A1-202ENST00000470661 A8MUU9 505 aa3.4□□□□□ -1.87
PTP4A1-202ENST00000470661 COX6CP09669 75 aa3.4□□□□□ -1.87
PTP4A1-202ENST00000470661 LINC00472Q9H8W2 130 aa3.4□□□□□ -1.87
PTP4A1-202ENST00000470661 SS18L2Q9UHA2 77 aa3.4□□□□□ -1.87
PTP4A1-202ENST00000470661 IGHV6-1A0A0B4J1U7 121 aa3.39□□□□□ -1.87
PTP4A1-202ENST00000470661 TMEM256-PLSCR3K7ERE1 68 aa3.39□□□□□ -1.87
PTP4A1-202ENST00000470661 LINC00313P59037 77 aa3.39□□□□□ -1.87
PTP4A1-202ENST00000470661 C20orf166-AS1Q96NR2 134 aa3.39□□□□□ -1.87
PTP4A1-202ENST00000470661 TRBV7-4A0A0J9YYF1 115 aa3.38□□□□□ -1.87
PTP4A1-202ENST00000470661 TRACP01848 142 aa3.38□□□□□ -1.87
PTP4A1-202ENST00000470661 BATFQ16520 125 aa3.38□□□□□ -1.87
PTP4A1-202ENST00000470661 RBM3P98179 157 aaKnown RBP3.37□□□□□ -1.87
PTP4A1-202ENST00000470661 MTURNQ8N3F0 131 aa3.36□□□□□ -1.87
PTP4A1-202ENST00000470661 CRCT1Q9UGL9 99 aa3.36□□□□□ -1.87
PTP4A1-202ENST00000470661 LOC105371267A0A1B0GV96 52 aa3.35□□□□□ -1.87
PTP4A1-202ENST00000470661 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
PTP4A1-202ENST00000470661 DSCR8Q96T75 97 aa3.35□□□□□ -1.87
PTP4A1-202ENST00000470661 C9JAW5 83 aa3.34□□□□□ -1.87
PTP4A1-202ENST00000470661 ATXN8Q156A1 80 aa3.34□□□□□ -1.87
PTP4A1-202ENST00000470661 C14orf132Q9NPU4 83 aa3.34□□□□□ -1.87
PTP4A1-202ENST00000470661 A0A1B0GVX0 72 aa3.33□□□□□ -1.88
PTP4A1-202ENST00000470661 M0R143 59 aa3.33□□□□□ -1.88
PTP4A1-202ENST00000470661 Q6ZQT0 140 aa3.33□□□□□ -1.88
PTP4A1-202ENST00000470661 H3BQ85 93 aa3.32□□□□□ -1.88
PTP4A1-202ENST00000470661 HRES1P13985 223 aa3.32□□□□□ -1.88
PTP4A1-202ENST00000470661 USH2AO75445 5202 aa3.32□□□□□ -1.88
PTP4A1-202ENST00000470661 FAM236DA0A1B0GTK5 79 aa3.31□□□□□ -1.88
PTP4A1-202ENST00000470661 TAX1BP3O14907 124 aa3.31□□□□□ -1.88
PTP4A1-202ENST00000470661 SMIM6P0DI80 62 aa3.31□□□□□ -1.88
PTP4A1-202ENST00000470661 FAM236CP0DP71 79 aa3.31□□□□□ -1.88
PTP4A1-202ENST00000470661 SSPOA2VEC9 5147 aa3.3□□□□□ -1.88
PTP4A1-202ENST00000470661 TRBV20-1A0A075B6N2 111 aa3.3□□□□□ -1.88
PTP4A1-202ENST00000470661 IGKV3D-7A0A0C4DH55 119 aa3.3□□□□□ -1.88
PTP4A1-202ENST00000470661 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
PTP4A1-202ENST00000470661 LOC110117498A0A087WWA1 95 aa3.29□□□□□ -1.88
PTP4A1-202ENST00000470661 Q8N9L7 120 aa3.29□□□□□ -1.88
PTP4A1-202ENST00000470661 C8orf17Q9NRJ1 99 aa3.29□□□□□ -1.88
PTP4A1-202ENST00000470661 TSTD3H0UI37 97 aa3.28□□□□□ -1.88
PTP4A1-202ENST00000470661 MT2AP02795 61 aa3.28□□□□□ -1.88
PTP4A1-202ENST00000470661 SPINK7P58062 85 aa3.28□□□□□ -1.88
PTP4A1-202ENST00000470661 ZCCHC13Q8WW36 166 aaKnown RBP3.28□□□□□ -1.88
PTP4A1-202ENST00000470661 C8orf87E5RJ46 101 aa3.27□□□□□ -1.89
PTP4A1-202ENST00000470661 MT1FP04733 61 aa3.27□□□□□ -1.89
PTP4A1-202ENST00000470661 LYRM7Q5U5X0 104 aa3.27□□□□□ -1.89
PTP4A1-202ENST00000470661 A0A1W2PPM0 123 aa3.26□□□□□ -1.89
PTP4A1-202ENST00000470661 A8MWP4 228 aa3.26□□□□□ -1.89
PTP4A1-202ENST00000470661 JMJD7-PLA2G4BH0Y9G9 81 aa3.26□□□□□ -1.89
PTP4A1-202ENST00000470661 NREPQ16612 68 aa3.26□□□□□ -1.89
PTP4A1-202ENST00000470661 J3KT08 172 aa3.25□□□□□ -1.89
PTP4A1-202ENST00000470661 K7EQZ3 153 aa3.25□□□□□ -1.89
PTP4A1-202ENST00000470661 NDUFB1O75438 58 aa3.25□□□□□ -1.89
PTP4A1-202ENST00000470661 PRR15Q8IV56 129 aa3.25□□□□□ -1.89
PTP4A1-202ENST00000470661 MMP24-AS1A0A0U1RRL7 71 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms