RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 RBAKDNA6NC62 111 aa0.66□□□□□ -2.3
ITGA6-209ENST00000470259 BCE1O60756 84 aa0.66□□□□□ -2.3
ITGA6-209ENST00000470259 ATP5EP56381 51 aaPredicted RBP0.66□□□□□ -2.3
ITGA6-209ENST00000470259 UBE2G1P62253 170 aa0.66□□□□□ -2.3
ITGA6-209ENST00000470259 MPV17LQ2QL34 196 aa0.66□□□□□ -2.3
ITGA6-209ENST00000470259 COL5A1-AS1Q5SY13 56 aa0.66□□□□□ -2.3
ITGA6-209ENST00000470259 DMAC1Q96GE9 116 aa0.66□□□□□ -2.3
ITGA6-209ENST00000470259 AQP10Q96PS8 301 aa0.66□□□□□ -2.3
ITGA6-209ENST00000470259 S100A13Q99584 98 aa0.66□□□□□ -2.3
ITGA6-209ENST00000470259 ATG5Q9H1Y0 275 aa0.66□□□□□ -2.3
ITGA6-209ENST00000470259 NPVFQ9HCQ7 196 aa0.66□□□□□ -2.3
ITGA6-209ENST00000470259 MRPL35Q9NZE8 188 aaKnown RBP0.66□□□□□ -2.3
ITGA6-209ENST00000470259 MRPL36Q9P0J6 103 aaKnown RBP0.66□□□□□ -2.3
ITGA6-209ENST00000470259 TMEM14CQ9P0S9 112 aa0.66□□□□□ -2.3
ITGA6-209ENST00000470259 UBE2L5PA0A1B0GUS4 154 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 MPC2O95563 127 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 SNCAP37840 140 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 UBE2L3P68036 154 aaKnown RBP0.65□□□□□ -2.31
ITGA6-209ENST00000470259 HMGN3Q15651 99 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 CYP2G1PQ6ZSU1 146 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 C5orf38Q86SI9 138 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 Q86TA4 180 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 IFI27L1Q96BM0 104 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 OBSCN-AS1Q96MR7 158 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 ODF3Q96PU9 254 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 SNHG12Q9BXW3 62 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 Q9H521 79 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 C22orf24Q9Y442 160 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 AP4S1Q9Y587 144 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 SNURFQ9Y675 71 aa0.65□□□□□ -2.31
ITGA6-209ENST00000470259 TRBV6-7A0A0A0MS04 114 aa0.64□□□□□ -2.31
ITGA6-209ENST00000470259 TRAV13-2A0A0B4J235 113 aa0.64□□□□□ -2.31
ITGA6-209ENST00000470259 INE1O15225 51 aa0.64□□□□□ -2.31
ITGA6-209ENST00000470259 CCKP06307 115 aa0.64□□□□□ -2.31
ITGA6-209ENST00000470259 MT1GP13640 62 aa0.64□□□□□ -2.31
ITGA6-209ENST00000470259 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
ITGA6-209ENST00000470259 VAMP8Q9BV40 100 aa0.64□□□□□ -2.31
ITGA6-209ENST00000470259 SPRR2GQ9BYE4 73 aa0.64□□□□□ -2.31
ITGA6-209ENST00000470259 MED9Q9NWA0 146 aa0.64□□□□□ -2.31
ITGA6-209ENST00000470259 BET1LQ9NYM9 111 aa0.64□□□□□ -2.31
ITGA6-209ENST00000470259 IGKV3OR2-268A0A0C4DH90 116 aa0.63□□□□□ -2.31
ITGA6-209ENST00000470259 HIGD1CA8MV81 97 aa0.63□□□□□ -2.31
ITGA6-209ENST00000470259 HCG22E2RYF7 251 aa0.63□□□□□ -2.31
ITGA6-209ENST00000470259 SSSCA1O60232 199 aa0.63□□□□□ -2.31
ITGA6-209ENST00000470259 MT-ATP8P03928 68 aa0.63□□□□□ -2.31
ITGA6-209ENST00000470259 PDE6GP18545 87 aa0.63□□□□□ -2.31
ITGA6-209ENST00000470259 FXYD6P3P58550 94 aa0.63□□□□□ -2.31
ITGA6-209ENST00000470259 GNG11P61952 73 aa0.63□□□□□ -2.31
ITGA6-209ENST00000470259 MT1XP80297 61 aa0.63□□□□□ -2.31
ITGA6-209ENST00000470259 SPATA45Q537H7 98 aa0.63□□□□□ -2.31
ITGA6-209ENST00000470259 ARHGAP5-AS1Q96IT6 56 aa0.63□□□□□ -2.31
ITGA6-209ENST00000470259 PMCHL2Q9BQD1 86 aa0.63□□□□□ -2.31
ITGA6-209ENST00000470259 NDUFA4L2Q9NRX3 87 aa0.63□□□□□ -2.31
ITGA6-209ENST00000470259 R4GMQ9 66 aa0.63□□□□□ -2.31
ITGA6-209ENST00000470259 IGKV2-40A0A087WW87 121 aaPredicted RBP0.62□□□□□ -2.31
ITGA6-209ENST00000470259 LOC110117498A0A087WWA1 95 aa0.62□□□□□ -2.31
ITGA6-209ENST00000470259 IGKV3D-7A0A0C4DH55 119 aa0.62□□□□□ -2.31
ITGA6-209ENST00000470259 TEX49A0A1B0GTD5 131 aa0.62□□□□□ -2.31
ITGA6-209ENST00000470259 LOC101927531A0A1B0GV80 90 aa0.62□□□□□ -2.31
ITGA6-209ENST00000470259 NAP1L6A6NFF2 107 aa0.62□□□□□ -2.31
ITGA6-209ENST00000470259 FXYD1O00168 92 aa0.62□□□□□ -2.31
ITGA6-209ENST00000470259 GNGT2O14610 69 aa0.62□□□□□ -2.31
ITGA6-209ENST00000470259 IGKV2D-40P01614 121 aaPredicted RBP0.62□□□□□ -2.31
ITGA6-209ENST00000470259 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.62□□□□□ -2.31
ITGA6-209ENST00000470259 ZNF818PQ6ZRF7 136 aa0.62□□□□□ -2.31
ITGA6-209ENST00000470259 C20orf197Q8N268 126 aa0.62□□□□□ -2.31
ITGA6-209ENST00000470259 C9orf62Q8N4C0 152 aa0.62□□□□□ -2.31
ITGA6-209ENST00000470259 FAM213BQ8TBF2 198 aa0.62□□□□□ -2.31
ITGA6-209ENST00000470259 hADV29S1A0JD25 119 aa0.61□□□□□ -2.31
ITGA6-209ENST00000470259 H3BQ15 152 aa0.61□□□□□ -2.31
ITGA6-209ENST00000470259 SIX6O95475 246 aa0.61□□□□□ -2.31
ITGA6-209ENST00000470259 FXYD4P59646 89 aa0.61□□□□□ -2.31
ITGA6-209ENST00000470259 KRTDAPP60985 99 aa0.61□□□□□ -2.31
ITGA6-209ENST00000470259 SSBP1Q04837 148 aaKnown RBP0.61□□□□□ -2.31
ITGA6-209ENST00000470259 LINC01590Q5TEZ4 76 aa0.61□□□□□ -2.31
ITGA6-209ENST00000470259 FAM74A4Q5TZK3 123 aa0.61□□□□□ -2.31
ITGA6-209ENST00000470259 CFAP126Q5VTH2 177 aa0.61□□□□□ -2.31
ITGA6-209ENST00000470259 XAF1Q6GPH4 301 aa0.61□□□□□ -2.31
ITGA6-209ENST00000470259 CYP4F30PQ9H0H9 118 aa0.61□□□□□ -2.31
ITGA6-209ENST00000470259 PRO1933Q9H354 126 aa0.61□□□□□ -2.31
ITGA6-209ENST00000470259 MANBALQ9NQG1 85 aa0.61□□□□□ -2.31
ITGA6-209ENST00000470259 SCP2D1Q9UJQ7 156 aa0.61□□□□□ -2.31
ITGA6-209ENST00000470259 TRBV7-3A0A075B6L6 115 aa0.6□□□□□ -2.31
ITGA6-209ENST00000470259 A0A1W2PPM0 123 aa0.6□□□□□ -2.31
ITGA6-209ENST00000470259 ATOX1O00244 68 aa0.6□□□□□ -2.31
ITGA6-209ENST00000470259 IGLC1P0CG04 106 aa0.6□□□□□ -2.31
ITGA6-209ENST00000470259 FAUP35544 74 aaKnown RBP0.6□□□□□ -2.31
ITGA6-209ENST00000470259 SEC11AP67812 179 aa0.6□□□□□ -2.31
ITGA6-209ENST00000470259 ZNF56Q15929 161 aa0.6□□□□□ -2.31
ITGA6-209ENST00000470259 UNQ6190/PRO20217Q6UXQ8 127 aa0.6□□□□□ -2.31
ITGA6-209ENST00000470259 Q6ZQY7 126 aa0.6□□□□□ -2.31
ITGA6-209ENST00000470259 MT1MQ8N339 61 aa0.6□□□□□ -2.31
ITGA6-209ENST00000470259 COX7B2Q8TF08 81 aa0.6□□□□□ -2.31
ITGA6-209ENST00000470259 PPP1R1CQ8WVI7 109 aa0.6□□□□□ -2.31
ITGA6-209ENST00000470259 PLAC4Q8WY50 150 aa0.6□□□□□ -2.31
ITGA6-209ENST00000470259 UQCR10Q9UDW1 63 aa0.6□□□□□ -2.31
ITGA6-209ENST00000470259 V9GYV3 84 aa0.6□□□□□ -2.31
ITGA6-209ENST00000470259 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.59□□□□□ -2.31
ITGA6-209ENST00000470259 CHKB-CPT1BH3BT56 60 aa0.59□□□□□ -2.31
ITGA6-209ENST00000470259 NCR3O14931 201 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms