RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
SYNGAP1-205ENST00000470232 RPL37AP8A6NKH3 93 aa5.22□□□□□ -1.57
SYNGAP1-205ENST00000470232 LCE4AQ5TA78 99 aa5.22□□□□□ -1.57
SYNGAP1-205ENST00000470232 FAM19A5Q7Z5A7 132 aaPredicted RBP5.22□□□□□ -1.57
SYNGAP1-205ENST00000470232 IGLV7-46A0A075B6I9 117 aa5.21□□□□□ -1.58
SYNGAP1-205ENST00000470232 FAM236DA0A1B0GTK5 79 aa5.21□□□□□ -1.58
SYNGAP1-205ENST00000470232 FAM168BA1KXE4 195 aa5.21□□□□□ -1.58
SYNGAP1-205ENST00000470232 FAM236CP0DP71 79 aa5.21□□□□□ -1.58
SYNGAP1-205ENST00000470232 Q6ZRX8 168 aa5.21□□□□□ -1.58
SYNGAP1-205ENST00000470232 KRTAP11-1Q8IUC1 163 aa5.21□□□□□ -1.58
SYNGAP1-205ENST00000470232 BPY2O14599 106 aa5.19□□□□□ -1.58
SYNGAP1-205ENST00000470232 IGKV4-1P06312 121 aa5.19□□□□□ -1.58
SYNGAP1-205ENST00000470232 SPRR1AP35321 89 aa5.19□□□□□ -1.58
SYNGAP1-205ENST00000470232 MRPL55Q7Z7F7 128 aaKnown RBP5.19□□□□□ -1.58
SYNGAP1-205ENST00000470232 RETNLBQ9BQ08 111 aa5.19□□□□□ -1.58
SYNGAP1-205ENST00000470232 Q9BRP9 147 aa5.19□□□□□ -1.58
SYNGAP1-205ENST00000470232 IGLV5-48A0A075B6I7 105 aa5.18□□□□□ -1.58
SYNGAP1-205ENST00000470232 KRTAP4-16G5E9R7 235 aaPredicted RBP5.18□□□□□ -1.58
SYNGAP1-205ENST00000470232 ST20-AS1Q8NBB2 130 aa5.18□□□□□ -1.58
SYNGAP1-205ENST00000470232 A0A087X002 238 aa5.17□□□□□ -1.58
SYNGAP1-205ENST00000470232 A0A1B0GW54 56 aa5.17□□□□□ -1.58
SYNGAP1-205ENST00000470232 KRTAP7-1Q8IUC3 87 aa5.17□□□□□ -1.58
SYNGAP1-205ENST00000470232 Q8N9L7 120 aa5.17□□□□□ -1.58
SYNGAP1-205ENST00000470232 SNURFQ9Y675 71 aa5.17□□□□□ -1.58
SYNGAP1-205ENST00000470232 A0A1W2PNM2 257 aa5.16□□□□□ -1.58
SYNGAP1-205ENST00000470232 F8WEM9 126 aa5.16□□□□□ -1.58
SYNGAP1-205ENST00000470232 ERC2-IT1O76042 136 aa5.16□□□□□ -1.58
SYNGAP1-205ENST00000470232 KLKP1Q107X0 134 aa5.16□□□□□ -1.58
SYNGAP1-205ENST00000470232 LINC00304Q8N9R0 145 aa5.16□□□□□ -1.58
SYNGAP1-205ENST00000470232 Q8NBF4 154 aa5.16□□□□□ -1.58
SYNGAP1-205ENST00000470232 SERP1Q9Y6X1 66 aa5.15□□□□□ -1.59
SYNGAP1-205ENST00000470232 H7BZZ5 65 aa5.14□□□□□ -1.59
SYNGAP1-205ENST00000470232 NDUFC1O43677 76 aa5.14□□□□□ -1.59
SYNGAP1-205ENST00000470232 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
SYNGAP1-205ENST00000470232 KRTAP9-7A8MTY7 169 aa5.13□□□□□ -1.59
SYNGAP1-205ENST00000470232 ATP5EP56381 51 aaPredicted RBP5.13□□□□□ -1.59
SYNGAP1-205ENST00000470232 SEC61BP60468 96 aaKnown RBP5.13□□□□□ -1.59
SYNGAP1-205ENST00000470232 ASB16-AS1Q495Z4 193 aa5.13□□□□□ -1.59
SYNGAP1-205ENST00000470232 FAM229BQ4G0N7 80 aa5.12□□□□□ -1.59
SYNGAP1-205ENST00000470232 TMEM254Q8TBM7 123 aa5.12□□□□□ -1.59
SYNGAP1-205ENST00000470232 FP248Q71RG6 208 aaPredicted RBP5.11□□□□□ -1.59
SYNGAP1-205ENST00000470232 SMIM29Q86T20 159 aa5.11□□□□□ -1.59
SYNGAP1-205ENST00000470232 SPRR4Q96PI1 79 aa5.11□□□□□ -1.59
SYNGAP1-205ENST00000470232 UBE2AP49459 152 aa5.1□□□□□ -1.59
SYNGAP1-205ENST00000470232 PRLHP81277 87 aa5.1□□□□□ -1.59
SYNGAP1-205ENST00000470232 KRTAP13-2Q52LG2 175 aa5.1□□□□□ -1.59
SYNGAP1-205ENST00000470232 OCR1Q9BZK8 76 aa5.1□□□□□ -1.59
SYNGAP1-205ENST00000470232 ANAPC11Q9NYG5 84 aa5.1□□□□□ -1.59
SYNGAP1-205ENST00000470232 C5orf47Q569G3 176 aa5.09□□□□□ -1.59
SYNGAP1-205ENST00000470232 SPAG11AQ6PDA7 123 aa5.09□□□□□ -1.59
SYNGAP1-205ENST00000470232 IGFL1Q6UW32 110 aa5.09□□□□□ -1.59
SYNGAP1-205ENST00000470232 HIGD2AQ9BW72 106 aa5.09□□□□□ -1.59
SYNGAP1-205ENST00000470232 DSCR10P59022 87 aa5.08□□□□□ -1.6
SYNGAP1-205ENST00000470232 IGLV8-61A0A075B6I0 122 aa5.07□□□□□ -1.6
SYNGAP1-205ENST00000470232 K7EQZ3 153 aa5.06□□□□□ -1.6
SYNGAP1-205ENST00000470232 Q5XG85 94 aa5.06□□□□□ -1.6
SYNGAP1-205ENST00000470232 SMIM26A0A096LP01 95 aa5.05□□□□□ -1.6
SYNGAP1-205ENST00000470232 A0A0G2JQZ4 141 aa5.05□□□□□ -1.6
SYNGAP1-205ENST00000470232 HCG22E2RYF7 251 aa5.05□□□□□ -1.6
SYNGAP1-205ENST00000470232 C4orf26Q17RF5 130 aa5.05□□□□□ -1.6
SYNGAP1-205ENST00000470232 HRCT1Q6UXD1 115 aa5.05□□□□□ -1.6
SYNGAP1-205ENST00000470232 A0A087WSZ3 146 aa5.04□□□□□ -1.6
SYNGAP1-205ENST00000470232 SPRR1BP22528 89 aa5.04□□□□□ -1.6
SYNGAP1-205ENST00000470232 KRTAP13-3Q3SY46 172 aa5.04□□□□□ -1.6
SYNGAP1-205ENST00000470232 KRTAP4-1Q9BYQ7 146 aa5.04□□□□□ -1.6
SYNGAP1-205ENST00000470232 DEFB116Q30KQ4 102 aa5.01□□□□□ -1.61
SYNGAP1-205ENST00000470232 WFDC13Q8IUB5 93 aa5.01□□□□□ -1.61
SYNGAP1-205ENST00000470232 KRTAP13-1Q8IUC0 172 aa5.01□□□□□ -1.61
SYNGAP1-205ENST00000470232 MT1HP80294 61 aa4.99□□□□□ -1.61
SYNGAP1-205ENST00000470232 ZCCHC13Q8WW36 166 aaKnown RBP4.99□□□□□ -1.61
SYNGAP1-205ENST00000470232 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
SYNGAP1-205ENST00000470232 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
SYNGAP1-205ENST00000470232 SPINK1P00995 79 aa4.97□□□□□ -1.61
SYNGAP1-205ENST00000470232 MP68P56378 58 aa4.97□□□□□ -1.61
SYNGAP1-205ENST00000470232 KRTAP10-6P60371 365 aaPredicted RBP4.97□□□□□ -1.61
SYNGAP1-205ENST00000470232 A8MWP4 228 aa4.96□□□□□ -1.62
SYNGAP1-205ENST00000470232 M0R2T5 61 aa4.96□□□□□ -1.62
SYNGAP1-205ENST00000470232 CASC2Q6XLA1 102 aa4.96□□□□□ -1.62
SYNGAP1-205ENST00000470232 PRR15Q8IV56 129 aa4.96□□□□□ -1.62
SYNGAP1-205ENST00000470232 KRTAP9-3Q9BYQ3 159 aa4.96□□□□□ -1.62
SYNGAP1-205ENST00000470232 KRTAP4-11Q9BYQ6 195 aa4.96□□□□□ -1.62
SYNGAP1-205ENST00000470232 LINC00472Q9H8W2 130 aa4.95□□□□□ -1.62
SYNGAP1-205ENST00000470232 H0Y9P7 68 aa4.94□□□□□ -1.62
SYNGAP1-205ENST00000470232 ZNF706Q9Y5V0 76 aaPredicted RBP4.94□□□□□ -1.62
SYNGAP1-205ENST00000470232 IGLV9-49A0A0B4J1Y8 123 aa4.93□□□□□ -1.62
SYNGAP1-205ENST00000470232 hDV103S1A0JD37 113 aa4.93□□□□□ -1.62
SYNGAP1-205ENST00000470232 H3BPC8 53 aa4.93□□□□□ -1.62
SYNGAP1-205ENST00000470232 NDUFB1O75438 58 aa4.93□□□□□ -1.62
SYNGAP1-205ENST00000470232 MPLKIPQ8TAP9 179 aa4.93□□□□□ -1.62
SYNGAP1-205ENST00000470232 TRAV22A0A0B4J277 110 aa4.92□□□□□ -1.62
SYNGAP1-205ENST00000470232 KRTAP19-2Q3LHN2 52 aa4.92□□□□□ -1.62
SYNGAP1-205ENST00000470232 LINC00208Q96KT6 92 aa4.92□□□□□ -1.62
SYNGAP1-205ENST00000470232 CYP4F30PQ9H0H9 118 aa4.92□□□□□ -1.62
SYNGAP1-205ENST00000470232 MMP24-AS1A0A0U1RRL7 71 aa4.91□□□□□ -1.62
SYNGAP1-205ENST00000470232 RPS29P62273 56 aaKnown RBP4.9□□□□□ -1.63
SYNGAP1-205ENST00000470232 LINC00483Q53H64 154 aa4.9□□□□□ -1.63
SYNGAP1-205ENST00000470232 C1orf64Q8NEQ6 169 aa4.9□□□□□ -1.63
SYNGAP1-205ENST00000470232 MOBPQ13875 183 aa4.88□□□□□ -1.63
SYNGAP1-205ENST00000470232 PCOTHQ58A44 107 aa4.88□□□□□ -1.63
SYNGAP1-205ENST00000470232 C8orf17Q9NRJ1 99 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms