RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 RPL37AP61513 92 aaKnown RBP5.92□□□□□ -1.46
HDAC3-205ENST00000469550 Q6ZRN7 208 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-205ENST00000469550 LOC101927531A0A1B0GV80 90 aa5.91□□□□□ -1.46
HDAC3-205ENST00000469550 PRLHP81277 87 aa5.91□□□□□ -1.46
HDAC3-205ENST00000469550 IGLV7-46A0A075B6I9 117 aa5.9□□□□□ -1.46
HDAC3-205ENST00000469550 CHKB-CPT1BH3BT56 60 aa5.9□□□□□ -1.46
HDAC3-205ENST00000469550 Q75L30 129 aa5.89□□□□□ -1.47
HDAC3-205ENST00000469550 A0A096LNI7 61 aa5.88□□□□□ -1.47
HDAC3-205ENST00000469550 CD164Q04900 197 aa5.88□□□□□ -1.47
HDAC3-205ENST00000469550 ATP11AUNQ6ZP68 121 aa5.87□□□□□ -1.47
HDAC3-205ENST00000469550 PRR15LQ9BU68 103 aa5.87□□□□□ -1.47
HDAC3-205ENST00000469550 MMP24-AS1A0A0U1RRL7 71 aa5.87□□□□□ -1.47
HDAC3-205ENST00000469550 ASB16-AS1Q495Z4 193 aa5.86□□□□□ -1.47
HDAC3-205ENST00000469550 COA5Q86WW8 74 aa5.86□□□□□ -1.47
HDAC3-205ENST00000469550 TP53AIP1Q9HCN2 124 aa5.86□□□□□ -1.47
HDAC3-205ENST00000469550 A8MU10 97 aa5.85□□□□□ -1.47
HDAC3-205ENST00000469550 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.47
HDAC3-205ENST00000469550 VPS13BQ7Z7G8 4022 aa5.84□□□□□ -1.47
HDAC3-205ENST00000469550 A0A087WTM6 91 aa5.84□□□□□ -1.48
HDAC3-205ENST00000469550 LCA10Q71F78 164 aa5.84□□□□□ -1.48
HDAC3-205ENST00000469550 IGKV2-24A0A0C4DH68 120 aa5.83□□□□□ -1.48
HDAC3-205ENST00000469550 PLAC8Q9NZF1 115 aa5.83□□□□□ -1.48
HDAC3-205ENST00000469550 LINC01558Q9Y6Z2 57 aa5.83□□□□□ -1.48
HDAC3-205ENST00000469550 MOBPQ13875 183 aa5.82□□□□□ -1.48
HDAC3-205ENST00000469550 FAT1Q14517 4588 aa5.82□□□□□ -1.48
HDAC3-205ENST00000469550 NDUFS5O43920 106 aa5.82□□□□□ -1.48
HDAC3-205ENST00000469550 KRTAP10-1P60331 282 aa5.82□□□□□ -1.48
HDAC3-205ENST00000469550 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
HDAC3-205ENST00000469550 A6NED7 52 aa5.81□□□□□ -1.48
HDAC3-205ENST00000469550 Q5VSD8 79 aa5.81□□□□□ -1.48
HDAC3-205ENST00000469550 PHF5AQ7RTV0 110 aaKnown RBP5.81□□□□□ -1.48
HDAC3-205ENST00000469550 HERC1Q15751 4861 aa5.81□□□□□ -1.48
HDAC3-205ENST00000469550 C14orf177Q52M58 125 aa5.8□□□□□ -1.48
HDAC3-205ENST00000469550 KRTAP11-1Q8IUC1 163 aa5.8□□□□□ -1.48
HDAC3-205ENST00000469550 A6NN06 94 aa5.79□□□□□ -1.48
HDAC3-205ENST00000469550 DNAH8Q96JB1 4490 aa5.79□□□□□ -1.48
HDAC3-205ENST00000469550 Q96NJ1 140 aa5.78□□□□□ -1.48
HDAC3-205ENST00000469550 DMBT1Q9UGM3 2413 aaPredicted RBP5.78□□□□□ -1.48
HDAC3-205ENST00000469550 KRTAP13-1Q8IUC0 172 aa5.78□□□□□ -1.48
HDAC3-205ENST00000469550 SPTSSBQ8NFR3 76 aa5.78□□□□□ -1.48
HDAC3-205ENST00000469550 C8orf17Q9NRJ1 99 aa5.77□□□□□ -1.49
HDAC3-205ENST00000469550 PCOTHQ58A44 107 aa5.76□□□□□ -1.49
HDAC3-205ENST00000469550 IGLV5-52A0A0A0MRZ9 124 aa5.75□□□□□ -1.49
HDAC3-205ENST00000469550 FAM229AH3BQW9 127 aa5.75□□□□□ -1.49
HDAC3-205ENST00000469550 CHTF8P0CG12 524 aa5.75□□□□□ -1.49
HDAC3-205ENST00000469550 MYCBP2O75592 4640 aa5.74□□□□□ -1.49
HDAC3-205ENST00000469550 A0A1B0GVX0 72 aa5.74□□□□□ -1.49
HDAC3-205ENST00000469550 SPAG11AQ6PDA7 123 aa5.74□□□□□ -1.49
HDAC3-205ENST00000469550 SMR3BP02814 79 aaPredicted RBP5.73□□□□□ -1.49
HDAC3-205ENST00000469550 HRES1P13985 223 aa5.73□□□□□ -1.49
HDAC3-205ENST00000469550 LINC00483Q53H64 154 aa5.73□□□□□ -1.49
HDAC3-205ENST00000469550 RBM12B-AS1Q9P1G2 102 aa5.73□□□□□ -1.49
HDAC3-205ENST00000469550 Q6ZSA8 131 aa5.73□□□□□ -1.49
HDAC3-205ENST00000469550 MRPL34Q9BQ48 92 aaKnown RBP5.73□□□□□ -1.49
HDAC3-205ENST00000469550 FLG2Q5D862 2391 aaPredicted RBP5.71□□□□□ -1.49
HDAC3-205ENST00000469550 C7orf65Q6ZTY9 151 aa5.71□□□□□ -1.49
HDAC3-205ENST00000469550 SRRM2Q9UQ35 2752 aaKnown RBP5.7□□□□□ -1.5
HDAC3-205ENST00000469550 PLA2G1BP04054 148 aaKnown RBP5.69□□□□□ -1.5
HDAC3-205ENST00000469550 IGHV6-1A0A0B4J1U7 121 aa5.69□□□□□ -1.5
HDAC3-205ENST00000469550 ZNF706Q9Y5V0 76 aaPredicted RBP5.69□□□□□ -1.5
HDAC3-205ENST00000469550 IGLV9-49A0A0B4J1Y8 123 aa5.68□□□□□ -1.5
HDAC3-205ENST00000469550 SPINK7P58062 85 aa5.68□□□□□ -1.5
HDAC3-205ENST00000469550 J3QL48 77 aa5.67□□□□□ -1.5
HDAC3-205ENST00000469550 PANO1I0J062 215 aa5.65□□□□□ -1.51
HDAC3-205ENST00000469550 KRTAP10-4P60372 401 aaPredicted RBP5.65□□□□□ -1.51
HDAC3-205ENST00000469550 KRTAP13-3Q3SY46 172 aa5.65□□□□□ -1.51
HDAC3-205ENST00000469550 SPACA4Q8TDM5 124 aa5.64□□□□□ -1.51
HDAC3-205ENST00000469550 PKHD1L1Q86WI1 4243 aa5.64□□□□□ -1.51
HDAC3-205ENST00000469550 ACYP2P14621 99 aa5.64□□□□□ -1.51
HDAC3-205ENST00000469550 A0A087X002 238 aa5.62□□□□□ -1.51
HDAC3-205ENST00000469550 NOTCH2NLQ7Z3S9 236 aa5.62□□□□□ -1.51
HDAC3-205ENST00000469550 PRR26Q8N8Z3 221 aa5.62□□□□□ -1.51
HDAC3-205ENST00000469550 FAT3Q8TDW7 4589 aa5.61□□□□□ -1.51
HDAC3-205ENST00000469550 HMCN2Q8NDA2 5059 aa5.61□□□□□ -1.51
HDAC3-205ENST00000469550 Q5W150 140 aa5.6□□□□□ -1.51
HDAC3-205ENST00000469550 CIRBP-AS1Q8TBR5 109 aa5.6□□□□□ -1.51
HDAC3-205ENST00000469550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.6□□□□□ -1.51
HDAC3-205ENST00000469550 C8orf87E5RJ46 101 aa5.59□□□□□ -1.51
HDAC3-205ENST00000469550 DMAC1Q96GE9 116 aa5.59□□□□□ -1.51
HDAC3-205ENST00000469550 ZNF861PO60384 105 aa5.58□□□□□ -1.52
HDAC3-205ENST00000469550 LRP1Q07954 4544 aaKnown RBP5.58□□□□□ -1.52
HDAC3-205ENST00000469550 PSORS1C2Q9UIG4 136 aa5.57□□□□□ -1.52
HDAC3-205ENST00000469550 SPATA8Q6RVD6 105 aa5.55□□□□□ -1.52
HDAC3-205ENST00000469550 LINC00313P59037 77 aa5.54□□□□□ -1.52
HDAC3-205ENST00000469550 A0A1B0GU69 56 aa5.53□□□□□ -1.52
HDAC3-205ENST00000469550 ANAPC11Q9NYG5 84 aa5.53□□□□□ -1.52
HDAC3-205ENST00000469550 SPINK6Q6UWN8 80 aa5.52□□□□□ -1.53
HDAC3-205ENST00000469550 SSBP3-AS1Q7Z2R9 100 aa5.52□□□□□ -1.53
HDAC3-205ENST00000469550 IGKV2-30P06310 120 aa5.51□□□□□ -1.53
HDAC3-205ENST00000469550 MT1HL1P0DM35 61 aa5.5□□□□□ -1.53
HDAC3-205ENST00000469550 UBR4Q5T4S7 5183 aa5.49□□□□□ -1.53
HDAC3-205ENST00000469550 UQCR11O14957 56 aa5.48□□□□□ -1.53
HDAC3-205ENST00000469550 IGLV7-43P04211 117 aa5.47□□□□□ -1.53
HDAC3-205ENST00000469550 MIR22HGQ0VDD5 57 aa5.47□□□□□ -1.53
HDAC3-205ENST00000469550 PRAC1Q96KF2 57 aa5.46□□□□□ -1.54
HDAC3-205ENST00000469550 TNXBP22105 4242 aa5.45□□□□□ -1.54
HDAC3-205ENST00000469550 LINC01554Q52M75 96 aa5.44□□□□□ -1.54
HDAC3-205ENST00000469550 ADM2Q7Z4H4 148 aa5.43□□□□□ -1.54
HDAC3-205ENST00000469550 KRTAP16-1A8MUX0 517 aa5.42□□□□□ -1.54
HDAC3-205ENST00000469550 IGKV2D-30A0A075B6S6 120 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms