RNA–Protein interactions for RNA: ENST00000469507.1

FAM49A-205, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 2

Gene FAM49A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-205ENST00000469507 HMCN2Q8NDA2 5059 aa1.36□□□□□ -2.19
FAM49A-205ENST00000469507 FRAS1Q86XX4 4008 aa1.36□□□□□ -2.19
FAM49A-205ENST00000469507 D6R8Y8 96 aa1.35□□□□□ -2.19
FAM49A-205ENST00000469507 F8WEM9 126 aa1.35□□□□□ -2.19
FAM49A-205ENST00000469507 CFDP00746 253 aaPredicted RBP1.35□□□□□ -2.19
FAM49A-205ENST00000469507 SMIM13P0DJ93 91 aa1.35□□□□□ -2.19
FAM49A-205ENST00000469507 C10orf113Q5VZT2 155 aa1.35□□□□□ -2.19
FAM49A-205ENST00000469507 LINC00643Q86TS7 51 aa1.35□□□□□ -2.19
FAM49A-205ENST00000469507 MUSTN1Q8IVN3 82 aa1.35□□□□□ -2.19
FAM49A-205ENST00000469507 HRNRQ86YZ3 2850 aaPredicted RBP1.35□□□□□ -2.19
FAM49A-205ENST00000469507 ARMS2P0C7Q2 107 aa1.34□□□□□ -2.19
FAM49A-205ENST00000469507 HMGN3Q15651 99 aa1.34□□□□□ -2.19
FAM49A-205ENST00000469507 S100ZQ8WXG8 99 aa1.34□□□□□ -2.19
FAM49A-205ENST00000469507 PSENENQ9NZ42 101 aa1.34□□□□□ -2.19
FAM49A-205ENST00000469507 LYSTQ99698 3801 aa1.34□□□□□ -2.2
FAM49A-205ENST00000469507 A0A087WXM4 84 aa1.33□□□□□ -2.2
FAM49A-205ENST00000469507 TRBV6-1A0A0K0K1D8 114 aa1.33□□□□□ -2.2
FAM49A-205ENST00000469507 IQCF6A8MYZ5 107 aa1.33□□□□□ -2.2
FAM49A-205ENST00000469507 HMGN2P05204 90 aaKnown RBP1.33□□□□□ -2.2
FAM49A-205ENST00000469507 HECTD4Q9Y4D8 3996 aa1.33□□□□□ -2.2
FAM49A-205ENST00000469507 CSMD3Q7Z407 3707 aa1.32□□□□□ -2.2
FAM49A-205ENST00000469507 MYMXA0A1B0GTQ4 84 aa1.32□□□□□ -2.2
FAM49A-205ENST00000469507 CEBPZOSA8MTT3 80 aa1.32□□□□□ -2.2
FAM49A-205ENST00000469507 UMAD1C9J7I0 102 aa1.32□□□□□ -2.2
FAM49A-205ENST00000469507 GNGT1P63211 74 aa1.32□□□□□ -2.2
FAM49A-205ENST00000469507 PLGLAQ15195 96 aa1.32□□□□□ -2.2
FAM49A-205ENST00000469507 SSBP3-AS1Q7Z2R9 100 aa1.32□□□□□ -2.2
FAM49A-205ENST00000469507 C6orf201Q7Z4U5 140 aa1.32□□□□□ -2.2
FAM49A-205ENST00000469507 C18orf32Q8TCD1 76 aa1.32□□□□□ -2.2
FAM49A-205ENST00000469507 S100A3P33764 101 aa1.31□□□□□ -2.2
FAM49A-205ENST00000469507 Q5BKY6 102 aa1.31□□□□□ -2.2
FAM49A-205ENST00000469507 LELP1Q5T871 98 aa1.31□□□□□ -2.2
FAM49A-205ENST00000469507 LINC01600Q96MT4 127 aa1.31□□□□□ -2.2
FAM49A-205ENST00000469507 PKHD1P08F94 4074 aa1.31□□□□□ -2.2
FAM49A-205ENST00000469507 DNAH9Q9NYC9 4486 aa1.3□□□□□ -2.2
FAM49A-205ENST00000469507 DEFB108AA8MXU0 73 aa1.3□□□□□ -2.2
FAM49A-205ENST00000469507 H3BVH4 76 aa1.3□□□□□ -2.2
FAM49A-205ENST00000469507 DEFB107AQ8IZN7 70 aa1.3□□□□□ -2.2
FAM49A-205ENST00000469507 KMT2AQ03164 3969 aa1.3□□□□□ -2.2
FAM49A-205ENST00000469507 NEBP20929 6669 aa1.29□□□□□ -2.2
FAM49A-205ENST00000469507 SPINK7P58062 85 aa1.29□□□□□ -2.2
FAM49A-205ENST00000469507 PRB3Q04118 309 aaPredicted RBP1.29□□□□□ -2.2
FAM49A-205ENST00000469507 HEPN1Q6WQI6 88 aa1.29□□□□□ -2.2
FAM49A-205ENST00000469507 GNG13Q9P2W3 67 aa1.29□□□□□ -2.2
FAM49A-205ENST00000469507 HSPG2P98160 4391 aa1.29□□□□□ -2.2
FAM49A-205ENST00000469507 GPR98Q8WXG9 6306 aa1.28□□□□□ -2.2
FAM49A-205ENST00000469507 H0Y9P7 68 aa1.28□□□□□ -2.2
FAM49A-205ENST00000469507 KRTAP20-1Q3LI63 56 aa1.28□□□□□ -2.2
FAM49A-205ENST00000469507 ANKRD36A6QL64 1941 aa1.28□□□□□ -2.2
FAM49A-205ENST00000469507 SSPOA2VEC9 5147 aa1.27□□□□□ -2.21
FAM49A-205ENST00000469507 STARD9Q9P2P6 4700 aa1.27□□□□□ -2.21
FAM49A-205ENST00000469507 COX6A2Q02221 97 aa1.27□□□□□ -2.21
FAM49A-205ENST00000469507 SPATA8Q6RVD6 105 aa1.27□□□□□ -2.21
FAM49A-205ENST00000469507 PLAC8Q9NZF1 115 aa1.27□□□□□ -2.21
FAM49A-205ENST00000469507 SYNE2Q8WXH0 6885 aaKnown RBP1.27□□□□□ -2.21
FAM49A-205ENST00000469507 A0A0D9SFI3 127 aa1.26□□□□□ -2.21
FAM49A-205ENST00000469507 A0A1B0GUT8 65 aa1.26□□□□□ -2.21
FAM49A-205ENST00000469507 CNFNQ9BYD5 112 aa1.26□□□□□ -2.21
FAM49A-205ENST00000469507 MYCBP2O75592 4640 aa1.26□□□□□ -2.21
FAM49A-205ENST00000469507 DNAH11Q96DT5 4516 aa1.26□□□□□ -2.21
FAM49A-205ENST00000469507 LRP2P98164 4655 aa1.25□□□□□ -2.21
FAM49A-205ENST00000469507 WFDC9Q8NEX5 89 aa1.25□□□□□ -2.21
FAM49A-205ENST00000469507 HILPDAQ9Y5L2 63 aa1.25□□□□□ -2.21
FAM49A-205ENST00000469507 ALMS1Q8TCU4 4167 aa1.24□□□□□ -2.21
FAM49A-205ENST00000469507 HUWE1Q7Z6Z7 4374 aaKnown RBP1.24□□□□□ -2.21
FAM49A-205ENST00000469507 IFI27P40305 119 aaPredicted RBP1.24□□□□□ -2.21
FAM49A-205ENST00000469507 Q5VSD8 79 aa1.24□□□□□ -2.21
FAM49A-205ENST00000469507 ATP5EP2Q5VTU8 51 aa1.24□□□□□ -2.21
FAM49A-205ENST00000469507 DNAH7Q8WXX0 4024 aa1.24□□□□□ -2.21
FAM49A-205ENST00000469507 DYNC1H1Q14204 4646 aaKnown RBP1.24□□□□□ -2.21
FAM49A-205ENST00000469507 UBE2D4Q9Y2X8 147 aa1.23□□□□□ -2.21
FAM49A-205ENST00000469507 DNAH10Q8IVF4 4471 aa1.23□□□□□ -2.21
FAM49A-205ENST00000469507 PLECQ15149 4684 aaKnown RBP1.23□□□□□ -2.21
FAM49A-205ENST00000469507 FAT2Q9NYQ8 4349 aa1.23□□□□□ -2.21
FAM49A-205ENST00000469507 A0A087WWC5 75 aa1.22□□□□□ -2.21
FAM49A-205ENST00000469507 SFTA3P0C7M3 94 aa1.22□□□□□ -2.21
FAM49A-205ENST00000469507 DEFB112Q30KQ8 113 aa1.22□□□□□ -2.21
FAM49A-205ENST00000469507 FAT1Q14517 4588 aa1.22□□□□□ -2.21
FAM49A-205ENST00000469507 TRBV7-4A0A0J9YYF1 115 aa1.21□□□□□ -2.22
FAM49A-205ENST00000469507 A0A1B0GU69 56 aa1.21□□□□□ -2.22
FAM49A-205ENST00000469507 I3L2K1 104 aa1.21□□□□□ -2.22
FAM49A-205ENST00000469507 COX8AP10176 69 aa1.21□□□□□ -2.22
FAM49A-205ENST00000469507 ATXN8Q156A1 80 aa1.21□□□□□ -2.22
FAM49A-205ENST00000469507 TP53AIP1Q9HCN2 124 aa1.21□□□□□ -2.22
FAM49A-205ENST00000469507 DNAH3Q8TD57 4116 aa1.2□□□□□ -2.22
FAM49A-205ENST00000469507 NDUFB1O75438 58 aa1.2□□□□□ -2.22
FAM49A-205ENST00000469507 DEFB104AQ8WTQ1 72 aa1.2□□□□□ -2.22
FAM49A-205ENST00000469507 GAFA1Q96PS6 74 aa1.2□□□□□ -2.22
FAM49A-205ENST00000469507 PRO0255Q9UI72 69 aa1.2□□□□□ -2.22
FAM49A-205ENST00000469507 APOBP04114 4563 aaKnown RBP1.19□□□□□ -2.22
FAM49A-205ENST00000469507 TNCP24821 2201 aa1.19□□□□□ -2.22
FAM49A-205ENST00000469507 TRAV21A0A0B4J279 112 aa1.19□□□□□ -2.22
FAM49A-205ENST00000469507 LINC00959A0A1B0GUT2 108 aa1.19□□□□□ -2.22
FAM49A-205ENST00000469507 MACF1Q9UPN3 7388 aaKnown RBP1.19□□□□□ -2.22
FAM49A-205ENST00000469507 PKHD1L1Q86WI1 4243 aa1.18□□□□□ -2.22
FAM49A-205ENST00000469507 KMT2DO14686 5537 aa1.17□□□□□ -2.22
FAM49A-205ENST00000469507 IFI6P09912 130 aa1.17□□□□□ -2.22
FAM49A-205ENST00000469507 C3orf79P0CE67 100 aa1.17□□□□□ -2.22
FAM49A-205ENST00000469507 RPL38P63173 70 aaKnown RBP1.16□□□□□ -2.22
FAM49A-205ENST00000469507 NREPQ16612 68 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms