RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 A8MUU9 505 aa5.27□□□□□ -1.57
SMARCE1-207ENST00000469334 WWC2-AS2Q96NR7 200 aa5.27□□□□□ -1.57
SMARCE1-207ENST00000469334 FLNAP21333 2647 aaKnown RBP5.24□□□□□ -1.57
SMARCE1-207ENST00000469334 LY6G6CO95867 125 aa5.24□□□□□ -1.57
SMARCE1-207ENST00000469334 IGLV5-52A0A0A0MRZ9 124 aa5.23□□□□□ -1.57
SMARCE1-207ENST00000469334 ACANP16112 2415 aa5.23□□□□□ -1.57
SMARCE1-207ENST00000469334 DNAH1Q9P2D7 4330 aa5.22□□□□□ -1.57
SMARCE1-207ENST00000469334 IGKV2D-30A0A075B6S6 120 aa5.21□□□□□ -1.58
SMARCE1-207ENST00000469334 SPINK6Q6UWN8 80 aa5.2□□□□□ -1.58
SMARCE1-207ENST00000469334 NSD1Q96L73 2696 aaPredicted RBP5.2□□□□□ -1.58
SMARCE1-207ENST00000469334 LINC00304Q8N9R0 145 aa5.2□□□□□ -1.58
SMARCE1-207ENST00000469334 INAFM1C9JVW0 142 aa5.18□□□□□ -1.58
SMARCE1-207ENST00000469334 KRTAP10-11P60412 298 aa5.18□□□□□ -1.58
SMARCE1-207ENST00000469334 KRTAP1-5Q9BYS1 174 aa5.17□□□□□ -1.58
SMARCE1-207ENST00000469334 A0A0A0MQY5 61 aa5.16□□□□□ -1.58
SMARCE1-207ENST00000469334 H0YAA0 97 aa5.15□□□□□ -1.58
SMARCE1-207ENST00000469334 VWFP04275 2813 aa5.15□□□□□ -1.58
SMARCE1-207ENST00000469334 SPACA4Q8TDM5 124 aa5.15□□□□□ -1.59
SMARCE1-207ENST00000469334 ATRQ13535 2644 aa5.14□□□□□ -1.59
SMARCE1-207ENST00000469334 STAB1Q9NY15 2570 aa5.14□□□□□ -1.59
SMARCE1-207ENST00000469334 PANO1I0J062 215 aa5.14□□□□□ -1.59
SMARCE1-207ENST00000469334 P0C880 135 aa5.14□□□□□ -1.59
SMARCE1-207ENST00000469334 Q6ZSA8 131 aa5.14□□□□□ -1.59
SMARCE1-207ENST00000469334 PKD1L1Q8TDX9 2849 aa5.13□□□□□ -1.59
SMARCE1-207ENST00000469334 COL6A5A8TX70 2615 aa5.12□□□□□ -1.59
SMARCE1-207ENST00000469334 SSBP3-AS1Q7Z2R9 100 aa5.12□□□□□ -1.59
SMARCE1-207ENST00000469334 SRRM2Q9UQ35 2752 aaKnown RBP5.12□□□□□ -1.59
SMARCE1-207ENST00000469334 FBN1P35555 2871 aaKnown RBP5.11□□□□□ -1.59
SMARCE1-207ENST00000469334 KRTAP16-1A8MUX0 517 aa5.11□□□□□ -1.59
SMARCE1-207ENST00000469334 K7ERS5 55 aa5.11□□□□□ -1.59
SMARCE1-207ENST00000469334 SMR3AQ99954 134 aa5.1□□□□□ -1.59
SMARCE1-207ENST00000469334 KRTAP17-1Q9BYP8 105 aa5.1□□□□□ -1.59
SMARCE1-207ENST00000469334 ANK2Q01484 3957 aa5.09□□□□□ -1.59
SMARCE1-207ENST00000469334 ANAPC11Q9NYG5 84 aa5.09□□□□□ -1.59
SMARCE1-207ENST00000469334 PSORS1C2Q9UIG4 136 aa5.09□□□□□ -1.59
SMARCE1-207ENST00000469334 A0A1B0GU33 70 aa5.09□□□□□ -1.59
SMARCE1-207ENST00000469334 CIRBP-AS1Q8TBR5 109 aa5.09□□□□□ -1.59
SMARCE1-207ENST00000469334 UBE2DNLQ8IWF7 75 aa5.08□□□□□ -1.6
SMARCE1-207ENST00000469334 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.08□□□□□ -1.6
SMARCE1-207ENST00000469334 TENM3Q9P273 2699 aa5.08□□□□□ -1.6
SMARCE1-207ENST00000469334 SPINK1P00995 79 aa5.07□□□□□ -1.6
SMARCE1-207ENST00000469334 H1FX-AS1Q4G0G2 97 aa5.07□□□□□ -1.6
SMARCE1-207ENST00000469334 NBEAL1Q6ZS30 2694 aa5.06□□□□□ -1.6
SMARCE1-207ENST00000469334 NUPR2A6NF83 97 aa5.05□□□□□ -1.6
SMARCE1-207ENST00000469334 J3QL48 77 aa5.05□□□□□ -1.6
SMARCE1-207ENST00000469334 Q6ZRN7 208 aaPredicted RBP5.02□□□□□ -1.61
SMARCE1-207ENST00000469334 TYMSOSQ8TAI1 123 aa5.01□□□□□ -1.61
SMARCE1-207ENST00000469334 APLNQ9ULZ1 77 aa5.01□□□□□ -1.61
SMARCE1-207ENST00000469334 A0A087WTM6 91 aa5□□□□□ -1.61
SMARCE1-207ENST00000469334 NBDYA0A0U1RRE5 68 aa5□□□□□ -1.61
SMARCE1-207ENST00000469334 SPINT4Q6UDR6 99 aa5□□□□□ -1.61
SMARCE1-207ENST00000469334 Q8N1X5 172 aa5□□□□□ -1.61
SMARCE1-207ENST00000469334 C20orf166-AS1Q96NR2 134 aa4.99□□□□□ -1.61
SMARCE1-207ENST00000469334 TENM1Q9UKZ4 2725 aa4.99□□□□□ -1.61
SMARCE1-207ENST00000469334 TRRAPQ9Y4A5 3859 aa4.98□□□□□ -1.61
SMARCE1-207ENST00000469334 CRIPTQ9P021 101 aa4.96□□□□□ -1.62
SMARCE1-207ENST00000469334 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
SMARCE1-207ENST00000469334 DNAH10Q8IVF4 4471 aa4.94□□□□□ -1.62
SMARCE1-207ENST00000469334 CSMD3Q7Z407 3707 aa4.94□□□□□ -1.62
SMARCE1-207ENST00000469334 NDUFAF8A1L188 74 aa4.93□□□□□ -1.62
SMARCE1-207ENST00000469334 COX6B2Q6YFQ2 88 aa4.91□□□□□ -1.62
SMARCE1-207ENST00000469334 MEGF8Q7Z7M0 2845 aa4.91□□□□□ -1.62
SMARCE1-207ENST00000469334 LYSTQ99698 3801 aa4.91□□□□□ -1.62
SMARCE1-207ENST00000469334 RPL37P61927 97 aaKnown RBP4.9□□□□□ -1.63
SMARCE1-207ENST00000469334 MGAM2Q2M2H8 2515 aa4.9□□□□□ -1.63
SMARCE1-207ENST00000469334 KRTAP13-2Q52LG2 175 aa4.9□□□□□ -1.63
SMARCE1-207ENST00000469334 DNAH3Q8TD57 4116 aa4.9□□□□□ -1.63
SMARCE1-207ENST00000469334 TPRXLQ17RH7 258 aa4.89□□□□□ -1.63
SMARCE1-207ENST00000469334 DNAH9Q9NYC9 4486 aa4.87□□□□□ -1.63
SMARCE1-207ENST00000469334 DNAH8Q96JB1 4490 aa4.87□□□□□ -1.63
SMARCE1-207ENST00000469334 CMYA5Q8N3K9 4069 aa4.87□□□□□ -1.63
SMARCE1-207ENST00000469334 FLG2Q5D862 2391 aaPredicted RBP4.85□□□□□ -1.63
SMARCE1-207ENST00000469334 KRTAP3-1Q9BYR8 98 aa4.84□□□□□ -1.63
SMARCE1-207ENST00000469334 TGP01266 2768 aa4.84□□□□□ -1.63
SMARCE1-207ENST00000469334 KRTAP24-1Q3LI83 254 aa4.83□□□□□ -1.64
SMARCE1-207ENST00000469334 HUWE1Q7Z6Z7 4374 aaKnown RBP4.83□□□□□ -1.64
SMARCE1-207ENST00000469334 FRAS1Q86XX4 4008 aa4.83□□□□□ -1.64
SMARCE1-207ENST00000469334 COL7A1Q02388 2944 aa4.83□□□□□ -1.64
SMARCE1-207ENST00000469334 PRKDCP78527 4128 aaKnown RBP4.83□□□□□ -1.64
SMARCE1-207ENST00000469334 NOTCH1P46531 2555 aa4.79□□□□□ -1.64
SMARCE1-207ENST00000469334 RPS29P62273 56 aaKnown RBP4.79□□□□□ -1.64
SMARCE1-207ENST00000469334 DYNC2H1Q8NCM8 4307 aaKnown RBP4.78□□□□□ -1.64
SMARCE1-207ENST00000469334 KRTAP4-8Q9BYQ9 185 aa4.78□□□□□ -1.64
SMARCE1-207ENST00000469334 KRTAP1-4P0C5Y4 121 aa4.76□□□□□ -1.65
SMARCE1-207ENST00000469334 C10orf95Q9H7T3 257 aa4.76□□□□□ -1.65
SMARCE1-207ENST00000469334 VPS13DQ5THJ4 4388 aa4.75□□□□□ -1.65
SMARCE1-207ENST00000469334 KRTAP10-6P60371 365 aaPredicted RBP4.73□□□□□ -1.65
SMARCE1-207ENST00000469334 SEC61BP60468 96 aaKnown RBP4.72□□□□□ -1.65
SMARCE1-207ENST00000469334 HECTD4Q9Y4D8 3996 aa4.72□□□□□ -1.65
SMARCE1-207ENST00000469334 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
SMARCE1-207ENST00000469334 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.71□□□□□ -1.66
SMARCE1-207ENST00000469334 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.66
SMARCE1-207ENST00000469334 DNAH17Q9UFH2 4485 aa4.7□□□□□ -1.66
SMARCE1-207ENST00000469334 STAB2Q8WWQ8 2551 aa4.7□□□□□ -1.66
SMARCE1-207ENST00000469334 A0A0D9SG42 100 aa4.7□□□□□ -1.66
SMARCE1-207ENST00000469334 S4R3F8 94 aa4.7□□□□□ -1.66
SMARCE1-207ENST00000469334 DNAH7Q8WXX0 4024 aa4.69□□□□□ -1.66
SMARCE1-207ENST00000469334 LCE2BO14633 110 aa4.68□□□□□ -1.66
SMARCE1-207ENST00000469334 KRTAP9-2Q9BYQ4 174 aa4.68□□□□□ -1.66
SMARCE1-207ENST00000469334 KRTAP9-6A0A140TA67 174 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 192.1 ms