RNA–Protein interactions for RNA: ENST00000469102.1

CMC1-208, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 788 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-208ENST00000469102 H3BNG1 76 aa0.25□□□□□ -2.37
CMC1-208ENST00000469102 ALMS1Q8TCU4 4167 aa0.24□□□□□ -2.37
CMC1-208ENST00000469102 DDX60Q8IY21 1712 aaKnown RBP0.24□□□□□ -2.37
CMC1-208ENST00000469102 NF1P21359 2839 aa0.24□□□□□ -2.37
CMC1-208ENST00000469102 SPG11Q96JI7 2443 aa0.24□□□□□ -2.37
CMC1-208ENST00000469102 DEFB131AP59861 70 aa0.24□□□□□ -2.37
CMC1-208ENST00000469102 MTORP42345 2549 aa0.24□□□□□ -2.37
CMC1-208ENST00000469102 IQGAP2Q13576 1575 aa0.23□□□□□ -2.37
CMC1-208ENST00000469102 FLNCQ14315 2725 aa0.23□□□□□ -2.37
CMC1-208ENST00000469102 NSD1Q96L73 2696 aaPredicted RBP0.23□□□□□ -2.37
CMC1-208ENST00000469102 MMP24-AS1A0A0U1RRL7 71 aa0.23□□□□□ -2.37
CMC1-208ENST00000469102 TFF3Q07654 80 aa0.23□□□□□ -2.37
CMC1-208ENST00000469102 KIF21BO75037 1637 aa0.23□□□□□ -2.37
CMC1-208ENST00000469102 LRP1Q07954 4544 aaKnown RBP0.23□□□□□ -2.37
CMC1-208ENST00000469102 SRRM2Q9UQ35 2752 aaKnown RBP0.23□□□□□ -2.37
CMC1-208ENST00000469102 HUWE1Q7Z6Z7 4374 aaKnown RBP0.22□□□□□ -2.37
CMC1-208ENST00000469102 SPTBN4Q9H254 2564 aa0.22□□□□□ -2.37
CMC1-208ENST00000469102 A8MTW9 85 aa0.22□□□□□ -2.37
CMC1-208ENST00000469102 M0QY20 66 aa0.22□□□□□ -2.37
CMC1-208ENST00000469102 PRKDCP78527 4128 aaKnown RBP0.22□□□□□ -2.37
CMC1-208ENST00000469102 FAT2Q9NYQ8 4349 aa0.22□□□□□ -2.37
CMC1-208ENST00000469102 LRRK2Q5S007 2527 aa0.21□□□□□ -2.38
CMC1-208ENST00000469102 COL7A1Q02388 2944 aa0.21□□□□□ -2.38
CMC1-208ENST00000469102 KMT2AQ03164 3969 aa0.21□□□□□ -2.38
CMC1-208ENST00000469102 ACACAQ13085 2346 aa0.21□□□□□ -2.38
CMC1-208ENST00000469102 TRPM2O94759 1503 aa0.2□□□□□ -2.38
CMC1-208ENST00000469102 EPG5Q9HCE0 2579 aa0.2□□□□□ -2.38
CMC1-208ENST00000469102 FAM208AQ9UK61 1670 aaKnown RBP0.2□□□□□ -2.38
CMC1-208ENST00000469102 FAM186AA6NE01 2351 aa0.19□□□□□ -2.38
CMC1-208ENST00000469102 SETD2Q9BYW2 2564 aaPredicted RBP0.19□□□□□ -2.38
CMC1-208ENST00000469102 IQGAP1P46940 1657 aa0.19□□□□□ -2.38
CMC1-208ENST00000469102 MYCBP2O75592 4640 aa0.19□□□□□ -2.38
CMC1-208ENST00000469102 M0QZ58 72 aa0.19□□□□□ -2.38
CMC1-208ENST00000469102 NDUFA1O15239 70 aa0.19□□□□□ -2.38
CMC1-208ENST00000469102 TNP1P09430 55 aa0.19□□□□□ -2.38
CMC1-208ENST00000469102 SONP18583 2426 aaKnown RBP0.19□□□□□ -2.38
CMC1-208ENST00000469102 ZZEF1O43149 2961 aa0.19□□□□□ -2.38
CMC1-208ENST00000469102 GCN1Q92616 2671 aaKnown RBP0.19□□□□□ -2.38
CMC1-208ENST00000469102 FAT4Q6V0I7 4981 aa0.18□□□□□ -2.38
CMC1-208ENST00000469102 TENM2Q9NT68 2774 aa0.18□□□□□ -2.38
CMC1-208ENST00000469102 RIF1Q5UIP0 2472 aaKnown RBP0.18□□□□□ -2.38
CMC1-208ENST00000469102 SPRR2AP35326 72 aa0.18□□□□□ -2.38
CMC1-208ENST00000469102 DEFB110Q30KQ9 67 aa0.18□□□□□ -2.38
CMC1-208ENST00000469102 ANKRD11Q6UB99 2663 aaPredicted RBP0.18□□□□□ -2.38
CMC1-208ENST00000469102 ZANQ9Y493 2812 aa0.18□□□□□ -2.38
CMC1-208ENST00000469102 UTP20O75691 2785 aaKnown RBP0.17□□□□□ -2.38
CMC1-208ENST00000469102 STAB2Q8WWQ8 2551 aa0.17□□□□□ -2.38
CMC1-208ENST00000469102 SSPOA2VEC9 5147 aa0.17□□□□□ -2.38
CMC1-208ENST00000469102 NBEAL1Q6ZS30 2694 aa0.16□□□□□ -2.38
CMC1-208ENST00000469102 ANKHD1Q8IWZ3 2542 aaKnown RBP0.16□□□□□ -2.38
CMC1-208ENST00000469102 DMXL1Q9Y485 3027 aa0.16□□□□□ -2.38
CMC1-208ENST00000469102 CLTCL1P53675 1640 aa0.16□□□□□ -2.38
CMC1-208ENST00000469102 FASNP49327 2511 aaKnown RBP0.16□□□□□ -2.38
CMC1-208ENST00000469102 LPAP08519 4548 aa0.15□□□□□ -2.38
CMC1-208ENST00000469102 COL6A3P12111 3177 aa0.15□□□□□ -2.39
CMC1-208ENST00000469102 NBEAQ8NFP9 2946 aa0.15□□□□□ -2.39
CMC1-208ENST00000469102 LYSTQ99698 3801 aa0.15□□□□□ -2.39
CMC1-208ENST00000469102 HIVEP1P15822 2718 aa0.15□□□□□ -2.39
CMC1-208ENST00000469102 TGP01266 2768 aa0.14□□□□□ -2.39
CMC1-208ENST00000469102 NBEAL2Q6ZNJ1 2754 aa0.14□□□□□ -2.39
CMC1-208ENST00000469102 NFAT5O94916 1531 aa0.14□□□□□ -2.39
CMC1-208ENST00000469102 MT1AP04731 61 aa0.14□□□□□ -2.39
CMC1-208ENST00000469102 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
CMC1-208ENST00000469102 PDZD2O15018 2839 aa0.14□□□□□ -2.39
CMC1-208ENST00000469102 MAP1AP78559 2803 aaPredicted RBP0.14□□□□□ -2.39
CMC1-208ENST00000469102 CCDC168Q8NDH2 2452 aa0.13□□□□□ -2.39
CMC1-208ENST00000469102 A0A0C4DFX4 3053 aa0.13□□□□□ -2.39
CMC1-208ENST00000469102 COL6A5A8TX70 2615 aa0.13□□□□□ -2.39
CMC1-208ENST00000469102 SPRR2EP22531 72 aa0.13□□□□□ -2.39
CMC1-208ENST00000469102 KRTAP6-2Q3LI66 62 aa0.13□□□□□ -2.39
CMC1-208ENST00000469102 STAB1Q9NY15 2570 aa0.13□□□□□ -2.39
CMC1-208ENST00000469102 TACC2O95359 2948 aa0.13□□□□□ -2.39
CMC1-208ENST00000469102 ATP7AQ04656 1500 aa0.13□□□□□ -2.39
CMC1-208ENST00000469102 ACACBO00763 2458 aa0.12□□□□□ -2.39
CMC1-208ENST00000469102 SAMD9LQ8IVG5 1584 aa0.12□□□□□ -2.39
CMC1-208ENST00000469102 TEP1Q99973 2627 aaKnown RBP0.12□□□□□ -2.39
CMC1-208ENST00000469102 MYO18BQ8IUG5 2567 aa0.11□□□□□ -2.39
CMC1-208ENST00000469102 HSPG2P98160 4391 aa0.11□□□□□ -2.39
CMC1-208ENST00000469102 POLR2KP53803 58 aaKnown RBP0.11□□□□□ -2.39
CMC1-208ENST00000469102 CLPSL2Q6UWE3 100 aa0.11□□□□□ -2.39
CMC1-208ENST00000469102 SPART-AS1P0CW21 52 aa0.1□□□□□ -2.39
CMC1-208ENST00000469102 HECTD4Q9Y4D8 3996 aa0.1□□□□□ -2.39
CMC1-208ENST00000469102 MXRA5Q9NR99 2828 aa0.1□□□□□ -2.39
CMC1-208ENST00000469102 DSTQ03001 7570 aaKnown RBP0.1□□□□□ -2.39
CMC1-208ENST00000469102 MGAM2Q2M2H8 2515 aa0.1□□□□□ -2.39
CMC1-208ENST00000469102 HMCN2Q8NDA2 5059 aa0.1□□□□□ -2.39
CMC1-208ENST00000469102 TOP2AP11388 1531 aaKnown RBP0.09□□□□□ -2.39
CMC1-208ENST00000469102 KALRNO60229 2985 aa0.09□□□□□ -2.4
CMC1-208ENST00000469102 SPRR2FQ96RM1 72 aa0.09□□□□□ -2.4
CMC1-208ENST00000469102 PKD1P98161 4303 aa0.09□□□□□ -2.4
CMC1-208ENST00000469102 TLN2Q9Y4G6 2542 aa0.08□□□□□ -2.4
CMC1-208ENST00000469102 HTTP42858 3142 aa0.08□□□□□ -2.4
CMC1-208ENST00000469102 USP9XQ93008 2570 aaPredicted RBP0.07□□□□□ -2.4
CMC1-208ENST00000469102 FLGP20930 4061 aaPredicted RBP0.07□□□□□ -2.4
CMC1-208ENST00000469102 COL12A1Q99715 3063 aa0.07□□□□□ -2.4
CMC1-208ENST00000469102 LRP2P98164 4655 aa0.07□□□□□ -2.4
CMC1-208ENST00000469102 SVEP1Q4LDE5 3571 aa0.06□□□□□ -2.4
CMC1-208ENST00000469102 VPS13BQ7Z7G8 4022 aa0.06□□□□□ -2.4
CMC1-208ENST00000469102 PKHD1P08F94 4074 aa0.05□□□□□ -2.4
CMC1-208ENST00000469102 KRTAP8-1Q8IUC2 63 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms