RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 KRTAP4-16G5E9R7 235 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC10-207ENST00000468864 APLNQ9ULZ1 77 aa6.47□□□□□ -1.37
TRAPPC10-207ENST00000468864 KRTAP29-1A8MX34 341 aaPredicted RBP6.44□□□□□ -1.38
TRAPPC10-207ENST00000468864 A0A0D9SG42 100 aa6.43□□□□□ -1.38
TRAPPC10-207ENST00000468864 TENM4Q6N022 2769 aa6.43□□□□□ -1.38
TRAPPC10-207ENST00000468864 SMR3BP02814 79 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC10-207ENST00000468864 PDZD2O15018 2839 aa6.41□□□□□ -1.38
TRAPPC10-207ENST00000468864 ZNF469Q96JG9 3925 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC10-207ENST00000468864 SPRR1BP22528 89 aa6.4□□□□□ -1.38
TRAPPC10-207ENST00000468864 CSAG1Q6PB30 78 aa6.4□□□□□ -1.38
TRAPPC10-207ENST00000468864 CRIPTQ9P021 101 aa6.4□□□□□ -1.39
TRAPPC10-207ENST00000468864 TENM3Q9P273 2699 aa6.39□□□□□ -1.39
TRAPPC10-207ENST00000468864 A6NN06 94 aa6.39□□□□□ -1.39
TRAPPC10-207ENST00000468864 PANO1I0J062 215 aa6.39□□□□□ -1.39
TRAPPC10-207ENST00000468864 A0A087X002 238 aa6.38□□□□□ -1.39
TRAPPC10-207ENST00000468864 NOTCH2NLQ7Z3S9 236 aa6.38□□□□□ -1.39
TRAPPC10-207ENST00000468864 Q5W150 140 aa6.37□□□□□ -1.39
TRAPPC10-207ENST00000468864 KRTAP7-1Q8IUC3 87 aa6.37□□□□□ -1.39
TRAPPC10-207ENST00000468864 LINC00304Q8N9R0 145 aa6.37□□□□□ -1.39
TRAPPC10-207ENST00000468864 DNAH3Q8TD57 4116 aa6.36□□□□□ -1.39
TRAPPC10-207ENST00000468864 KRTAP11-1Q8IUC1 163 aa6.36□□□□□ -1.39
TRAPPC10-207ENST00000468864 CMYA5Q8N3K9 4069 aa6.36□□□□□ -1.39
TRAPPC10-207ENST00000468864 WWC2-AS2Q96NR7 200 aa6.35□□□□□ -1.39
TRAPPC10-207ENST00000468864 FBN1P35555 2871 aaKnown RBP6.33□□□□□ -1.4
TRAPPC10-207ENST00000468864 LCE6AA0A183 80 aa6.33□□□□□ -1.4
TRAPPC10-207ENST00000468864 A0A1B0GU33 70 aa6.33□□□□□ -1.4
TRAPPC10-207ENST00000468864 VWFP04275 2813 aa6.32□□□□□ -1.4
TRAPPC10-207ENST00000468864 ADM2Q7Z4H4 148 aa6.31□□□□□ -1.4
TRAPPC10-207ENST00000468864 TENM1Q9UKZ4 2725 aa6.29□□□□□ -1.4
TRAPPC10-207ENST00000468864 Q6ZR54 194 aa6.29□□□□□ -1.4
TRAPPC10-207ENST00000468864 PKD1L1Q8TDX9 2849 aa6.29□□□□□ -1.4
TRAPPC10-207ENST00000468864 DNAH1Q9P2D7 4330 aa6.27□□□□□ -1.41
TRAPPC10-207ENST00000468864 CSMD2Q7Z408 3487 aa6.27□□□□□ -1.41
TRAPPC10-207ENST00000468864 ANK2Q01484 3957 aa6.25□□□□□ -1.41
TRAPPC10-207ENST00000468864 PLAC8Q9NZF1 115 aa6.25□□□□□ -1.41
TRAPPC10-207ENST00000468864 DMAC1Q96GE9 116 aa6.25□□□□□ -1.41
TRAPPC10-207ENST00000468864 TGP01266 2768 aa6.17□□□□□ -1.42
TRAPPC10-207ENST00000468864 TENM2Q9NT68 2774 aa6.17□□□□□ -1.42
TRAPPC10-207ENST00000468864 LINC00483Q53H64 154 aa6.16□□□□□ -1.42
TRAPPC10-207ENST00000468864 SPATA8Q6RVD6 105 aa6.15□□□□□ -1.42
TRAPPC10-207ENST00000468864 KRTAP10-2P60368 255 aa6.13□□□□□ -1.43
TRAPPC10-207ENST00000468864 DYNC2H1Q8NCM8 4307 aaKnown RBP6.11□□□□□ -1.43
TRAPPC10-207ENST00000468864 A0A0A0MQY5 61 aa6.11□□□□□ -1.43
TRAPPC10-207ENST00000468864 SRRM2Q9UQ35 2752 aaKnown RBP6.1□□□□□ -1.43
TRAPPC10-207ENST00000468864 OTOGQ6ZRI0 2925 aa6.08□□□□□ -1.44
TRAPPC10-207ENST00000468864 KRTAP10-1P60331 282 aa6.08□□□□□ -1.44
TRAPPC10-207ENST00000468864 ASB16-AS1Q495Z4 193 aa6.06□□□□□ -1.44
TRAPPC10-207ENST00000468864 KRTAP13-1Q8IUC0 172 aa6.06□□□□□ -1.44
TRAPPC10-207ENST00000468864 H1FX-AS1Q4G0G2 97 aa6.05□□□□□ -1.44
TRAPPC10-207ENST00000468864 RPL37P61927 97 aaKnown RBP6.03□□□□□ -1.44
TRAPPC10-207ENST00000468864 Q6ZRN7 208 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC10-207ENST00000468864 ROMO1P60602 79 aa6□□□□□ -1.45
TRAPPC10-207ENST00000468864 KRTAP13-2Q52LG2 175 aa5.98□□□□□ -1.45
TRAPPC10-207ENST00000468864 TRRAPQ9Y4A5 3859 aa5.98□□□□□ -1.45
TRAPPC10-207ENST00000468864 COX6B2Q6YFQ2 88 aa5.98□□□□□ -1.45
TRAPPC10-207ENST00000468864 KRTAP25-1Q3LHN0 102 aa5.97□□□□□ -1.45
TRAPPC10-207ENST00000468864 LUZP6Q538Z0 58 aa5.96□□□□□ -1.46
TRAPPC10-207ENST00000468864 S4R3F8 94 aa5.95□□□□□ -1.46
TRAPPC10-207ENST00000468864 FBN3Q75N90 2809 aa5.95□□□□□ -1.46
TRAPPC10-207ENST00000468864 KRTAP16-1A8MUX0 517 aa5.94□□□□□ -1.46
TRAPPC10-207ENST00000468864 LYSTQ99698 3801 aa5.93□□□□□ -1.46
TRAPPC10-207ENST00000468864 Q6ZSA8 131 aa5.93□□□□□ -1.46
TRAPPC10-207ENST00000468864 CAMK2N1Q7Z7J9 78 aa5.92□□□□□ -1.46
TRAPPC10-207ENST00000468864 NDUFAF8A1L188 74 aa5.87□□□□□ -1.47
TRAPPC10-207ENST00000468864 R4GN34 69 aa5.87□□□□□ -1.47
TRAPPC10-207ENST00000468864 DNAH7Q8WXX0 4024 aa5.86□□□□□ -1.47
TRAPPC10-207ENST00000468864 J3QL48 77 aa5.85□□□□□ -1.47
TRAPPC10-207ENST00000468864 A8MUU9 505 aa5.85□□□□□ -1.47
TRAPPC10-207ENST00000468864 PRKDCP78527 4128 aaKnown RBP5.83□□□□□ -1.48
TRAPPC10-207ENST00000468864 COL7A1Q02388 2944 aa5.82□□□□□ -1.48
TRAPPC10-207ENST00000468864 M0QZ58 72 aa5.81□□□□□ -1.48
TRAPPC10-207ENST00000468864 DNAH6Q9C0G6 4158 aa5.8□□□□□ -1.48
TRAPPC10-207ENST00000468864 CSMD3Q7Z407 3707 aa5.8□□□□□ -1.48
TRAPPC10-207ENST00000468864 MEGF8Q7Z7M0 2845 aa5.79□□□□□ -1.48
TRAPPC10-207ENST00000468864 H0YAA0 97 aa5.79□□□□□ -1.48
TRAPPC10-207ENST00000468864 C10orf95Q9H7T3 257 aa5.78□□□□□ -1.48
TRAPPC10-207ENST00000468864 HUWE1Q7Z6Z7 4374 aaKnown RBP5.75□□□□□ -1.49
TRAPPC10-207ENST00000468864 DNAH9Q9NYC9 4486 aa5.75□□□□□ -1.49
TRAPPC10-207ENST00000468864 Q5VSD8 79 aa5.71□□□□□ -1.49
TRAPPC10-207ENST00000468864 KRTAP1-4P0C5Y4 121 aa5.7□□□□□ -1.5
TRAPPC10-207ENST00000468864 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
TRAPPC10-207ENST00000468864 C20orf166-AS1Q96NR2 134 aa5.69□□□□□ -1.5
TRAPPC10-207ENST00000468864 FRAS1Q86XX4 4008 aa5.69□□□□□ -1.5
TRAPPC10-207ENST00000468864 HECTD4Q9Y4D8 3996 aa5.66□□□□□ -1.5
TRAPPC10-207ENST00000468864 DNAH17Q9UFH2 4485 aa5.66□□□□□ -1.5
TRAPPC10-207ENST00000468864 VPS13DQ5THJ4 4388 aa5.64□□□□□ -1.51
TRAPPC10-207ENST00000468864 RPS29P62273 56 aaKnown RBP5.64□□□□□ -1.51
TRAPPC10-207ENST00000468864 DNAH10Q8IVF4 4471 aa5.62□□□□□ -1.51
TRAPPC10-207ENST00000468864 P0C880 135 aa5.59□□□□□ -1.52
TRAPPC10-207ENST00000468864 M0R2T5 61 aa5.58□□□□□ -1.52
TRAPPC10-207ENST00000468864 DNAH2Q9P225 4427 aa5.57□□□□□ -1.52
TRAPPC10-207ENST00000468864 DNAH8Q96JB1 4490 aa5.57□□□□□ -1.52
TRAPPC10-207ENST00000468864 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
TRAPPC10-207ENST00000468864 ALMS1Q8TCU4 4167 aa5.51□□□□□ -1.53
TRAPPC10-207ENST00000468864 PLECQ15149 4684 aaKnown RBP5.5□□□□□ -1.53
TRAPPC10-207ENST00000468864 PLAC4Q8WY50 150 aa5.48□□□□□ -1.53
TRAPPC10-207ENST00000468864 PKD1P98161 4303 aa5.48□□□□□ -1.53
TRAPPC10-207ENST00000468864 KRTAP21-3Q3LHN1 58 aa5.47□□□□□ -1.53
TRAPPC10-207ENST00000468864 DNAH11Q96DT5 4516 aa5.46□□□□□ -1.53
TRAPPC10-207ENST00000468864 STARD9Q9P2P6 4700 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms