RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 LAMTOR2Q9Y2Q5 125 aa1.71□□□□□ -2.14
GPNMB-207ENST00000468723 H3BRM9 83 aa1.7□□□□□ -2.14
GPNMB-207ENST00000468723 NUPR1O60356 82 aa1.7□□□□□ -2.14
GPNMB-207ENST00000468723 BCE1O60756 84 aa1.7□□□□□ -2.14
GPNMB-207ENST00000468723 HIST1H2BKO60814 126 aa1.7□□□□□ -2.14
GPNMB-207ENST00000468723 HIST1H2BJP06899 126 aa1.7□□□□□ -2.14
GPNMB-207ENST00000468723 FABP4P15090 132 aa1.7□□□□□ -2.14
GPNMB-207ENST00000468723 MEIG1Q5JSS6 88 aa1.7□□□□□ -2.14
GPNMB-207ENST00000468723 FP248Q71RG6 208 aaPredicted RBP1.7□□□□□ -2.14
GPNMB-207ENST00000468723 SEC11CQ9BY50 192 aa1.7□□□□□ -2.14
GPNMB-207ENST00000468723 C14orf132Q9NPU4 83 aa1.7□□□□□ -2.14
GPNMB-207ENST00000468723 ERG28Q9UKR5 140 aa1.7□□□□□ -2.14
GPNMB-207ENST00000468723 HBDP02042 147 aa1.69□□□□□ -2.14
GPNMB-207ENST00000468723 IGLC3P0DOY3 106 aa1.69□□□□□ -2.14
GPNMB-207ENST00000468723 FABP2P12104 132 aa1.69□□□□□ -2.14
GPNMB-207ENST00000468723 SEC11AP67812 179 aa1.69□□□□□ -2.14
GPNMB-207ENST00000468723 IGKV2D-26A0A0A0MRZ7 120 aa1.68□□□□□ -2.14
GPNMB-207ENST00000468723 LINC01546A6NGU7 62 aa1.68□□□□□ -2.14
GPNMB-207ENST00000468723 J3KT08 172 aa1.68□□□□□ -2.14
GPNMB-207ENST00000468723 SCGB1A1P11684 91 aa1.68□□□□□ -2.14
GPNMB-207ENST00000468723 KRTAP6-3Q3LI67 103 aa1.68□□□□□ -2.14
GPNMB-207ENST00000468723 IFI27L1Q96BM0 104 aa1.68□□□□□ -2.14
GPNMB-207ENST00000468723 TRBV10-3A0A0K0K1G6 114 aa1.67□□□□□ -2.14
GPNMB-207ENST00000468723 K7EMI3 77 aa1.67□□□□□ -2.14
GPNMB-207ENST00000468723 ERC2-IT1O76042 136 aa1.67□□□□□ -2.14
GPNMB-207ENST00000468723 SVBPQ8N300 66 aa1.67□□□□□ -2.14
GPNMB-207ENST00000468723 CHCHD1Q96BP2 118 aaKnown RBP1.67□□□□□ -2.14
GPNMB-207ENST00000468723 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
GPNMB-207ENST00000468723 TRAV12-1A0A0B4J245 112 aa1.66□□□□□ -2.14
GPNMB-207ENST00000468723 ETDCA0A1B0GVM5 59 aa1.66□□□□□ -2.14
GPNMB-207ENST00000468723 LEPROTL1O95214 131 aa1.66□□□□□ -2.14
GPNMB-207ENST00000468723 ROMO1P60602 79 aa1.66□□□□□ -2.14
GPNMB-207ENST00000468723 KRTAP13-4Q3LI77 160 aa1.66□□□□□ -2.14
GPNMB-207ENST00000468723 C9orf153Q5TBE3 101 aa1.66□□□□□ -2.14
GPNMB-207ENST00000468723 SPRR4Q96PI1 79 aa1.66□□□□□ -2.14
GPNMB-207ENST00000468723 NDUFA12Q9UI09 145 aa1.66□□□□□ -2.14
GPNMB-207ENST00000468723 MYMXA0A1B0GTQ4 84 aa1.65□□□□□ -2.15
GPNMB-207ENST00000468723 C9orf92A6NGG3 77 aa1.65□□□□□ -2.15
GPNMB-207ENST00000468723 PCOTHQ58A44 107 aa1.65□□□□□ -2.15
GPNMB-207ENST00000468723 S100A7L2Q5SY68 101 aa1.65□□□□□ -2.15
GPNMB-207ENST00000468723 ATOH7Q8N100 152 aa1.65□□□□□ -2.15
GPNMB-207ENST00000468723 DEFB105AQ8NG35 78 aa1.65□□□□□ -2.15
GPNMB-207ENST00000468723 TMEM254Q8TBM7 123 aa1.65□□□□□ -2.15
GPNMB-207ENST00000468723 LINC01549A6NIU2 74 aa1.64□□□□□ -2.15
GPNMB-207ENST00000468723 DPM2O94777 84 aa1.64□□□□□ -2.15
GPNMB-207ENST00000468723 IGKCP01834 107 aa1.64□□□□□ -2.15
GPNMB-207ENST00000468723 KRTAP12-1P59990 96 aa1.64□□□□□ -2.15
GPNMB-207ENST00000468723 COX17Q14061 63 aa1.64□□□□□ -2.15
GPNMB-207ENST00000468723 KRTAP4-1Q9BYQ7 146 aa1.64□□□□□ -2.15
GPNMB-207ENST00000468723 FAT4Q6V0I7 4981 aa1.64□□□□□ -2.15
GPNMB-207ENST00000468723 MUC2Q02817 5179 aa1.64□□□□□ -2.15
GPNMB-207ENST00000468723 TRAV23DV6A0A075B6W5 121 aa1.63□□□□□ -2.15
GPNMB-207ENST00000468723 KRTDAPP60985 99 aa1.63□□□□□ -2.15
GPNMB-207ENST00000468723 RPS28P62857 69 aaKnown RBP1.63□□□□□ -2.15
GPNMB-207ENST00000468723 HSPB8Q9UJY1 196 aa1.63□□□□□ -2.15
GPNMB-207ENST00000468723 A0A1B0GX51 115 aa1.62□□□□□ -2.15
GPNMB-207ENST00000468723 ZNF815PA8K554 130 aa1.62□□□□□ -2.15
GPNMB-207ENST00000468723 C3orf79P0CE67 100 aa1.62□□□□□ -2.15
GPNMB-207ENST00000468723 LINC00308Q8TCZ7 52 aa1.62□□□□□ -2.15
GPNMB-207ENST00000468723 BRK1Q8WUW1 75 aa1.62□□□□□ -2.15
GPNMB-207ENST00000468723 RAB37Q96AX2 223 aa1.62□□□□□ -2.15
GPNMB-207ENST00000468723 KCNQ1DNQ9H478 68 aa1.62□□□□□ -2.15
GPNMB-207ENST00000468723 TRBV7-6A0A0J9YX20 115 aa1.61□□□□□ -2.15
GPNMB-207ENST00000468723 hDV103S1A0JD37 113 aa1.61□□□□□ -2.15
GPNMB-207ENST00000468723 SYS1-DBNDD2H3BUS1 97 aa1.61□□□□□ -2.15
GPNMB-207ENST00000468723 COX7BP24311 80 aa1.61□□□□□ -2.15
GPNMB-207ENST00000468723 PLNP26678 52 aa1.61□□□□□ -2.15
GPNMB-207ENST00000468723 SPRR1AP35321 89 aa1.61□□□□□ -2.15
GPNMB-207ENST00000468723 S100A12P80511 92 aa1.61□□□□□ -2.15
GPNMB-207ENST00000468723 Q6ZRX8 168 aa1.61□□□□□ -2.15
GPNMB-207ENST00000468723 MUSTN1Q8IVN3 82 aa1.61□□□□□ -2.15
GPNMB-207ENST00000468723 C12orf57Q99622 126 aa1.61□□□□□ -2.15
GPNMB-207ENST00000468723 LINC00587B1AMM8 73 aa1.6□□□□□ -2.15
GPNMB-207ENST00000468723 H3BMG7 143 aa1.6□□□□□ -2.15
GPNMB-207ENST00000468723 SPAG11AQ6PDA7 123 aa1.6□□□□□ -2.15
GPNMB-207ENST00000468723 SFTA2Q6UW10 78 aa1.6□□□□□ -2.15
GPNMB-207ENST00000468723 C9JAW5 83 aa1.59□□□□□ -2.15
GPNMB-207ENST00000468723 LINC01545Q5VT33 79 aa1.59□□□□□ -2.15
GPNMB-207ENST00000468723 Q5XG85 94 aa1.59□□□□□ -2.15
GPNMB-207ENST00000468723 SSBP3-AS1Q7Z2R9 100 aa1.59□□□□□ -2.15
GPNMB-207ENST00000468723 SPANXCQ9NY87 97 aa1.59□□□□□ -2.15
GPNMB-207ENST00000468723 LOC107984156A0A0G2JMH3 177 aa1.58□□□□□ -2.16
GPNMB-207ENST00000468723 SPINK1P00995 79 aa1.58□□□□□ -2.16
GPNMB-207ENST00000468723 ARL17AQ8IVW1 177 aa1.58□□□□□ -2.16
GPNMB-207ENST00000468723 SMIM11BQ8TCY0 68 aa1.58□□□□□ -2.16
GPNMB-207ENST00000468723 NAA38Q9BRA0 125 aaKnown RBP1.58□□□□□ -2.16
GPNMB-207ENST00000468723 A0A087WSZ3 146 aa1.57□□□□□ -2.16
GPNMB-207ENST00000468723 C20orf202A1L168 122 aa1.57□□□□□ -2.16
GPNMB-207ENST00000468723 ELOF1P60002 83 aaKnown RBP1.57□□□□□ -2.16
GPNMB-207ENST00000468723 ASB16-AS1Q495Z4 193 aa1.57□□□□□ -2.16
GPNMB-207ENST00000468723 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.57□□□□□ -2.16
GPNMB-207ENST00000468723 CLEC2BQ92478 149 aa1.57□□□□□ -2.16
GPNMB-207ENST00000468723 SPANXDQ9BXN6 97 aa1.57□□□□□ -2.16
GPNMB-207ENST00000468723 TEX49A0A1B0GTD5 131 aa1.56□□□□□ -2.16
GPNMB-207ENST00000468723 H3BUT2 72 aa1.56□□□□□ -2.16
GPNMB-207ENST00000468723 M0R2T5 61 aa1.56□□□□□ -2.16
GPNMB-207ENST00000468723 AKR1D1P51857 326 aa1.56□□□□□ -2.16
GPNMB-207ENST00000468723 C14orf144Q96I85 54 aa1.56□□□□□ -2.16
GPNMB-207ENST00000468723 PRO1933Q9H354 126 aa1.56□□□□□ -2.16
GPNMB-207ENST00000468723 CDC42SE1Q9NRR8 79 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms