RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 IGKV2D-24A0A075B6R9 120 aa3.97□□□□□ -1.77
PTPRE-206ENST00000467366 IGKV2-29A2NJV5 120 aaPredicted RBP3.97□□□□□ -1.77
PTPRE-206ENST00000467366 MGPP08493 103 aa3.97□□□□□ -1.77
PTPRE-206ENST00000467366 NTM-AS1Q6ZSK4 140 aa3.97□□□□□ -1.77
PTPRE-206ENST00000467366 C9orf163Q8N9P6 203 aa3.97□□□□□ -1.77
PTPRE-206ENST00000467366 C8orf17Q9NRJ1 99 aa3.97□□□□□ -1.77
PTPRE-206ENST00000467366 H3BRN7 92 aa3.96□□□□□ -1.78
PTPRE-206ENST00000467366 POLR2KP53803 58 aaKnown RBP3.96□□□□□ -1.78
PTPRE-206ENST00000467366 PRR4Q16378 134 aa3.96□□□□□ -1.78
PTPRE-206ENST00000467366 CSAG1Q6PB30 78 aa3.96□□□□□ -1.78
PTPRE-206ENST00000467366 CAMK2N1Q7Z7J9 78 aa3.96□□□□□ -1.78
PTPRE-206ENST00000467366 SMIM11BQ8TCY0 68 aa3.96□□□□□ -1.78
PTPRE-206ENST00000467366 SPINK6Q6UWN8 80 aa3.95□□□□□ -1.78
PTPRE-206ENST00000467366 A8MWP4 228 aa3.94□□□□□ -1.78
PTPRE-206ENST00000467366 C14orf177Q52M58 125 aa3.94□□□□□ -1.78
PTPRE-206ENST00000467366 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.94□□□□□ -1.78
PTPRE-206ENST00000467366 C7orf33Q8WU49 177 aa3.94□□□□□ -1.78
PTPRE-206ENST00000467366 DMAC1Q96GE9 116 aa3.94□□□□□ -1.78
PTPRE-206ENST00000467366 PLAC8Q9NZF1 115 aa3.94□□□□□ -1.78
PTPRE-206ENST00000467366 MUC17Q685J3 4493 aa3.94□□□□□ -1.78
PTPRE-206ENST00000467366 IGLV4-3A0A075B6K6 122 aa3.93□□□□□ -1.78
PTPRE-206ENST00000467366 A0A1W2PNM2 257 aa3.93□□□□□ -1.78
PTPRE-206ENST00000467366 UQCR11O14957 56 aa3.93□□□□□ -1.78
PTPRE-206ENST00000467366 IGKV4-1P06312 121 aa3.93□□□□□ -1.78
PTPRE-206ENST00000467366 HIGD2BQ4VC39 106 aa3.93□□□□□ -1.78
PTPRE-206ENST00000467366 C9orf129Q5T035 196 aaKnown RBP3.93□□□□□ -1.78
PTPRE-206ENST00000467366 KCNQ1DNQ9H478 68 aa3.93□□□□□ -1.78
PTPRE-206ENST00000467366 IGLV5-37A0A075B6J1 123 aa3.92□□□□□ -1.78
PTPRE-206ENST00000467366 C1orf137Q5JT78 98 aa3.92□□□□□ -1.78
PTPRE-206ENST00000467366 PRR9Q5T870 116 aa3.92□□□□□ -1.78
PTPRE-206ENST00000467366 SMIM29Q86T20 159 aa3.92□□□□□ -1.78
PTPRE-206ENST00000467366 SPACA4Q8TDM5 124 aa3.92□□□□□ -1.78
PTPRE-206ENST00000467366 RPL39LQ96EH5 51 aaKnown RBP3.92□□□□□ -1.78
PTPRE-206ENST00000467366 KLK12Q9UKR0 248 aa3.92□□□□□ -1.78
PTPRE-206ENST00000467366 COX7BP24311 80 aa3.91□□□□□ -1.78
PTPRE-206ENST00000467366 RPL39P62891 51 aaKnown RBP3.91□□□□□ -1.78
PTPRE-206ENST00000467366 COA5Q86WW8 74 aa3.91□□□□□ -1.78
PTPRE-206ENST00000467366 IGLV8-61A0A075B6I0 122 aa3.9□□□□□ -1.79
PTPRE-206ENST00000467366 IGLV5-39A0A0G2JS06 123 aa3.9□□□□□ -1.79
PTPRE-206ENST00000467366 RPL37AP8A6NKH3 93 aa3.9□□□□□ -1.79
PTPRE-206ENST00000467366 ADM2Q7Z4H4 148 aa3.9□□□□□ -1.79
PTPRE-206ENST00000467366 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.89□□□□□ -1.79
PTPRE-206ENST00000467366 IGKV2-40A0A087WW87 121 aaPredicted RBP3.89□□□□□ -1.79
PTPRE-206ENST00000467366 IGKV2D-40P01614 121 aaPredicted RBP3.89□□□□□ -1.79
PTPRE-206ENST00000467366 KRTAP4-16G5E9R7 235 aaPredicted RBP3.88□□□□□ -1.79
PTPRE-206ENST00000467366 SLPIP03973 132 aa3.88□□□□□ -1.79
PTPRE-206ENST00000467366 SPATA8Q6RVD6 105 aa3.88□□□□□ -1.79
PTPRE-206ENST00000467366 Q8TAT8 98 aa3.88□□□□□ -1.79
PTPRE-206ENST00000467366 PSORS1C2Q9UIG4 136 aa3.88□□□□□ -1.79
PTPRE-206ENST00000467366 IGLV4-60A0A075B6I1 120 aa3.87□□□□□ -1.79
PTPRE-206ENST00000467366 IGLV7-46A0A075B6I9 117 aa3.87□□□□□ -1.79
PTPRE-206ENST00000467366 TRBV6-4A0A1B0GX49 114 aa3.87□□□□□ -1.79
PTPRE-206ENST00000467366 SPINK7P58062 85 aa3.87□□□□□ -1.79
PTPRE-206ENST00000467366 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
PTPRE-206ENST00000467366 LINC00483Q53H64 154 aa3.87□□□□□ -1.79
PTPRE-206ENST00000467366 SUMO4Q6EEV6 95 aa3.87□□□□□ -1.79
PTPRE-206ENST00000467366 C20orf166-AS1Q96NR2 134 aa3.87□□□□□ -1.79
PTPRE-206ENST00000467366 RNASE3P12724 160 aaKnown RBP3.85□□□□□ -1.79
PTPRE-206ENST00000467366 LINC00158P58513 81 aa3.85□□□□□ -1.79
PTPRE-206ENST00000467366 IGKV2-28A0A075B6P5 120 aa3.84□□□□□ -1.79
PTPRE-206ENST00000467366 IGKV2D-28P01615 120 aa3.84□□□□□ -1.79
PTPRE-206ENST00000467366 KRTAP26-1Q6PEX3 210 aa3.84□□□□□ -1.79
PTPRE-206ENST00000467366 LINC00575Q6W349 94 aa3.84□□□□□ -1.79
PTPRE-206ENST00000467366 IGKV2-24A0A0C4DH68 120 aa3.83□□□□□ -1.8
PTPRE-206ENST00000467366 COX6A2Q02221 97 aa3.83□□□□□ -1.8
PTPRE-206ENST00000467366 COX17Q14061 63 aa3.83□□□□□ -1.8
PTPRE-206ENST00000467366 C10orf25Q5T742 122 aa3.83□□□□□ -1.8
PTPRE-206ENST00000467366 DHRS4-AS1Q9P1J3 65 aa3.83□□□□□ -1.8
PTPRE-206ENST00000467366 SPRR4Q96PI1 79 aa3.82□□□□□ -1.8
PTPRE-206ENST00000467366 CDKN2A-AS1Q9UH64 79 aa3.82□□□□□ -1.8
PTPRE-206ENST00000467366 PRR34Q9NV39 138 aa3.81□□□□□ -1.8
PTPRE-206ENST00000467366 A0A096LNI7 61 aa3.8□□□□□ -1.8
PTPRE-206ENST00000467366 SMIM1B2RUZ4 78 aa3.8□□□□□ -1.8
PTPRE-206ENST00000467366 M0QY20 66 aa3.8□□□□□ -1.8
PTPRE-206ENST00000467366 ANGP03950 147 aaKnown RBP3.8□□□□□ -1.8
PTPRE-206ENST00000467366 Q6ZQY7 126 aa3.8□□□□□ -1.8
PTPRE-206ENST00000467366 TLX1NBP0CAT3 122 aa3.79□□□□□ -1.8
PTPRE-206ENST00000467366 CLPSL2Q6UWE3 100 aa3.79□□□□□ -1.8
PTPRE-206ENST00000467366 KRTAP4-1Q9BYQ7 146 aa3.79□□□□□ -1.8
PTPRE-206ENST00000467366 A0A1B0GU69 56 aa3.78□□□□□ -1.8
PTPRE-206ENST00000467366 A0A1B0GVX0 72 aa3.78□□□□□ -1.8
PTPRE-206ENST00000467366 P0C880 135 aa3.78□□□□□ -1.8
PTPRE-206ENST00000467366 LINC00959A0A1B0GUT2 108 aa3.77□□□□□ -1.81
PTPRE-206ENST00000467366 KRTAP1-4P0C5Y4 121 aa3.77□□□□□ -1.81
PTPRE-206ENST00000467366 LCE2CQ5TA81 110 aa3.77□□□□□ -1.81
PTPRE-206ENST00000467366 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
PTPRE-206ENST00000467366 ZNF861PO60384 105 aa3.76□□□□□ -1.81
PTPRE-206ENST00000467366 LORP23490 312 aaPredicted RBP3.76□□□□□ -1.81
PTPRE-206ENST00000467366 SPINT4Q6UDR6 99 aa3.76□□□□□ -1.81
PTPRE-206ENST00000467366 ST20-AS1Q8NBB2 130 aa3.76□□□□□ -1.81
PTPRE-206ENST00000467366 TPRXLQ17RH7 258 aa3.75□□□□□ -1.81
PTPRE-206ENST00000467366 Q8IZM0 81 aa3.75□□□□□ -1.81
PTPRE-206ENST00000467366 C15orf56Q8N910 161 aa3.75□□□□□ -1.81
PTPRE-206ENST00000467366 Q8N9L7 120 aa3.75□□□□□ -1.81
PTPRE-206ENST00000467366 MT1HP80294 61 aa3.74□□□□□ -1.81
PTPRE-206ENST00000467366 IGLV7-43P04211 117 aa3.73□□□□□ -1.81
PTPRE-206ENST00000467366 KRTAP10-6P60371 365 aaPredicted RBP3.73□□□□□ -1.81
PTPRE-206ENST00000467366 Q5W150 140 aa3.73□□□□□ -1.81
PTPRE-206ENST00000467366 TP53AIP1Q9HCN2 124 aa3.73□□□□□ -1.81
PTPRE-206ENST00000467366 A0A1W2PNN7 141 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms