RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 A0A087WSZ3 146 aa8.7□□□□□ -1.02
TSSC4-208ENST00000467308 LCE2CQ5TA81 110 aa8.7□□□□□ -1.02
TSSC4-208ENST00000467308 HRCT1Q6UXD1 115 aa8.69□□□□□ -1.02
TSSC4-208ENST00000467308 LIMD2Q9BT23 127 aa8.69□□□□□ -1.02
TSSC4-208ENST00000467308 LINC00846Q9NV44 126 aa8.68□□□□□ -1.02
TSSC4-208ENST00000467308 KRTAP19-2Q3LHN2 52 aa8.65□□□□□ -1.02
TSSC4-208ENST00000467308 UBL5Q9BZL1 73 aa8.65□□□□□ -1.02
TSSC4-208ENST00000467308 NREPQ16612 68 aa8.64□□□□□ -1.03
TSSC4-208ENST00000467308 Q6ZVQ6 151 aa8.63□□□□□ -1.03
TSSC4-208ENST00000467308 MT1HP80294 61 aa8.62□□□□□ -1.03
TSSC4-208ENST00000467308 LINC00472Q9H8W2 130 aa8.62□□□□□ -1.03
TSSC4-208ENST00000467308 Q96NJ1 140 aa8.6□□□□□ -1.03
TSSC4-208ENST00000467308 J3KT08 172 aa8.58□□□□□ -1.04
TSSC4-208ENST00000467308 C1orf195Q5TG92 126 aa8.58□□□□□ -1.04
TSSC4-208ENST00000467308 LINC00643Q86TS7 51 aa8.57□□□□□ -1.04
TSSC4-208ENST00000467308 ATP5EP2Q5VTU8 51 aa8.56□□□□□ -1.04
TSSC4-208ENST00000467308 LORP23490 312 aaPredicted RBP8.54□□□□□ -1.04
TSSC4-208ENST00000467308 CXCL6P80162 114 aa8.54□□□□□ -1.04
TSSC4-208ENST00000467308 PCOTHQ58A44 107 aa8.54□□□□□ -1.04
TSSC4-208ENST00000467308 BPY2O14599 106 aa8.53□□□□□ -1.04
TSSC4-208ENST00000467308 SIGMAR1Q99720 223 aa8.53□□□□□ -1.04
TSSC4-208ENST00000467308 KRTAP10-6P60371 365 aaPredicted RBP8.52□□□□□ -1.05
TSSC4-208ENST00000467308 IGKV4-1P06312 121 aa8.5□□□□□ -1.05
TSSC4-208ENST00000467308 DSCR10P59022 87 aa8.49□□□□□ -1.05
TSSC4-208ENST00000467308 A8MWP4 228 aa8.48□□□□□ -1.05
TSSC4-208ENST00000467308 DEFB116Q30KQ4 102 aa8.48□□□□□ -1.05
TSSC4-208ENST00000467308 C9orf92A6NGG3 77 aa8.46□□□□□ -1.06
TSSC4-208ENST00000467308 NDUFB1O75438 58 aa8.45□□□□□ -1.06
TSSC4-208ENST00000467308 IGKV3D-7A0A0C4DH55 119 aa8.44□□□□□ -1.06
TSSC4-208ENST00000467308 PRR15Q8IV56 129 aa8.44□□□□□ -1.06
TSSC4-208ENST00000467308 A0A1B0GVX0 72 aa8.43□□□□□ -1.06
TSSC4-208ENST00000467308 M0R2T5 61 aa8.42□□□□□ -1.06
TSSC4-208ENST00000467308 IMUPQ9GZP8 106 aa8.42□□□□□ -1.06
TSSC4-208ENST00000467308 K7EQZ3 153 aa8.41□□□□□ -1.06
TSSC4-208ENST00000467308 MT-ATP8P03928 68 aa8.4□□□□□ -1.06
TSSC4-208ENST00000467308 FLGP20930 4061 aaPredicted RBP8.4□□□□□ -1.07
TSSC4-208ENST00000467308 C8orf87E5RJ46 101 aa8.39□□□□□ -1.07
TSSC4-208ENST00000467308 Q8N9L7 120 aa8.38□□□□□ -1.07
TSSC4-208ENST00000467308 IGHV6-1A0A0B4J1U7 121 aa8.36□□□□□ -1.07
TSSC4-208ENST00000467308 COX6B2Q6YFQ2 88 aa8.36□□□□□ -1.07
TSSC4-208ENST00000467308 C8orf17Q9NRJ1 99 aa8.35□□□□□ -1.07
TSSC4-208ENST00000467308 LINC00313P59037 77 aa8.34□□□□□ -1.07
TSSC4-208ENST00000467308 RPL37P61927 97 aaKnown RBP8.34□□□□□ -1.07
TSSC4-208ENST00000467308 MMP24-AS1A0A0U1RRL7 71 aa8.33□□□□□ -1.08
TSSC4-208ENST00000467308 HIST1H4AP62805 103 aaKnown RBP8.33□□□□□ -1.08
TSSC4-208ENST00000467308 HCG22E2RYF7 251 aa8.31□□□□□ -1.08
TSSC4-208ENST00000467308 NOTCH2NLQ7Z3S9 236 aa8.31□□□□□ -1.08
TSSC4-208ENST00000467308 A0A087WVE0 104 aa8.28□□□□□ -1.08
TSSC4-208ENST00000467308 hDV103S1A0JD37 113 aa8.28□□□□□ -1.08
TSSC4-208ENST00000467308 KRTAP16-1A8MUX0 517 aa8.28□□□□□ -1.08
TSSC4-208ENST00000467308 TMEM254Q8TBM7 123 aa8.28□□□□□ -1.08
TSSC4-208ENST00000467308 CASC2Q6XLA1 102 aa8.27□□□□□ -1.09
TSSC4-208ENST00000467308 KRTAP9-7A8MTY7 169 aa8.26□□□□□ -1.09
TSSC4-208ENST00000467308 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.25□□□□□ -1.09
TSSC4-208ENST00000467308 MRPL34Q9BQ48 92 aaKnown RBP8.24□□□□□ -1.09
TSSC4-208ENST00000467308 WFDC13Q8IUB5 93 aa8.23□□□□□ -1.09
TSSC4-208ENST00000467308 Q8N9P0 234 aaPredicted RBP8.23□□□□□ -1.09
TSSC4-208ENST00000467308 C20orf166-AS1Q96NR2 134 aa8.22□□□□□ -1.09
TSSC4-208ENST00000467308 A8MUU9 505 aa8.2□□□□□ -1.1
TSSC4-208ENST00000467308 Q75L30 129 aa8.19□□□□□ -1.1
TSSC4-208ENST00000467308 FAM236AA0A1B0GUQ0 79 aa8.18□□□□□ -1.1
TSSC4-208ENST00000467308 FAM236BA0A1B0GV22 79 aa8.18□□□□□ -1.1
TSSC4-208ENST00000467308 SCGB1A1P11684 91 aa8.15□□□□□ -1.1
TSSC4-208ENST00000467308 TP53AIP1Q9HCN2 124 aa8.15□□□□□ -1.1
TSSC4-208ENST00000467308 SSPOA2VEC9 5147 aa8.13□□□□□ -1.11
TSSC4-208ENST00000467308 SMIM20Q8N5G0 67 aa8.13□□□□□ -1.11
TSSC4-208ENST00000467308 USH2AO75445 5202 aa8.13□□□□□ -1.11
TSSC4-208ENST00000467308 ATP11AUNQ6ZP68 121 aa8.12□□□□□ -1.11
TSSC4-208ENST00000467308 OCR1Q9BZK8 76 aa8.12□□□□□ -1.11
TSSC4-208ENST00000467308 ATOX1O00244 68 aa8.11□□□□□ -1.11
TSSC4-208ENST00000467308 NDUFS5O43920 106 aa8.1□□□□□ -1.11
TSSC4-208ENST00000467308 KRTAP9-8Q9BYQ0 159 aa8.1□□□□□ -1.11
TSSC4-208ENST00000467308 UQCRQO14949 82 aa8.09□□□□□ -1.11
TSSC4-208ENST00000467308 TRAV7A0A075B6U4 112 aa8.06□□□□□ -1.12
TSSC4-208ENST00000467308 ZCCHC13Q8WW36 166 aaKnown RBP8.06□□□□□ -1.12
TSSC4-208ENST00000467308 Q5W150 140 aa8.02□□□□□ -1.13
TSSC4-208ENST00000467308 FCGBPQ9Y6R7 5405 aaPredicted RBP8.02□□□□□ -1.13
TSSC4-208ENST00000467308 TRAV22A0A0B4J277 110 aa8.01□□□□□ -1.13
TSSC4-208ENST00000467308 C5orf47Q569G3 176 aa8.01□□□□□ -1.13
TSSC4-208ENST00000467308 SERP2Q8N6R1 65 aa8.01□□□□□ -1.13
TSSC4-208ENST00000467308 H3BPC8 53 aa7.96□□□□□ -1.14
TSSC4-208ENST00000467308 H0Y9P7 68 aa7.95□□□□□ -1.14
TSSC4-208ENST00000467308 MP68P56378 58 aa7.95□□□□□ -1.14
TSSC4-208ENST00000467308 ANAPC13Q9BS18 74 aa7.94□□□□□ -1.14
TSSC4-208ENST00000467308 MT2AP02795 61 aa7.93□□□□□ -1.14
TSSC4-208ENST00000467308 COX7CP15954 63 aa7.93□□□□□ -1.14
TSSC4-208ENST00000467308 KRTAP19-1Q8IUB9 90 aa7.93□□□□□ -1.14
TSSC4-208ENST00000467308 LOC101927531A0A1B0GV80 90 aa7.91□□□□□ -1.14
TSSC4-208ENST00000467308 LCE2BO14633 110 aa7.9□□□□□ -1.14
TSSC4-208ENST00000467308 IGKV2-30P06310 120 aa7.9□□□□□ -1.14
TSSC4-208ENST00000467308 MACF1Q9UPN3 7388 aaKnown RBP7.89□□□□□ -1.15
TSSC4-208ENST00000467308 C7orf65Q6ZTY9 151 aa7.88□□□□□ -1.15
TSSC4-208ENST00000467308 C1orf64Q8NEQ6 169 aa7.88□□□□□ -1.15
TSSC4-208ENST00000467308 MT1FP04733 61 aa7.87□□□□□ -1.15
TSSC4-208ENST00000467308 LINC00208Q96KT6 92 aa7.87□□□□□ -1.15
TSSC4-208ENST00000467308 KRTAP9-3Q9BYQ3 159 aa7.87□□□□□ -1.15
TSSC4-208ENST00000467308 SPINK7P58062 85 aa7.86□□□□□ -1.15
TSSC4-208ENST00000467308 CYP4F30PQ9H0H9 118 aa7.86□□□□□ -1.15
TSSC4-208ENST00000467308 SYNE2Q8WXH0 6885 aaKnown RBP7.85□□□□□ -1.15
TSSC4-208ENST00000467308 KLKP1Q107X0 134 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms