RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 DNAH11Q96DT5 4516 aa-0.14□□□□□ -2.43
GTF3C3-209ENST00000466862 DMXL1Q9Y485 3027 aa-0.14□□□□□ -2.43
GTF3C3-209ENST00000466862 WT1-ASQ06250 92 aa-0.14□□□□□ -2.43
GTF3C3-209ENST00000466862 C6orf48Q9UBA6 75 aa-0.14□□□□□ -2.43
GTF3C3-209ENST00000466862 GLI2P10070 1586 aa-0.15□□□□□ -2.43
GTF3C3-209ENST00000466862 NBEAL1Q6ZS30 2694 aa-0.15□□□□□ -2.43
GTF3C3-209ENST00000466862 A0A087WWC5 75 aa-0.15□□□□□ -2.43
GTF3C3-209ENST00000466862 FCER1GP30273 86 aa-0.15□□□□□ -2.43
GTF3C3-209ENST00000466862 TOGARAM1Q9Y4F4 1720 aa-0.16□□□□□ -2.43
GTF3C3-209ENST00000466862 DNAH2Q9P225 4427 aa-0.16□□□□□ -2.43
GTF3C3-209ENST00000466862 FAT1Q14517 4588 aa-0.16□□□□□ -2.43
GTF3C3-209ENST00000466862 STARD9Q9P2P6 4700 aa-0.16□□□□□ -2.43
GTF3C3-209ENST00000466862 SFTA3P0C7M3 94 aa-0.16□□□□□ -2.44
GTF3C3-209ENST00000466862 TGP01266 2768 aa-0.16□□□□□ -2.44
GTF3C3-209ENST00000466862 LY75O60449 1722 aa-0.16□□□□□ -2.44
GTF3C3-209ENST00000466862 LAMA5O15230 3695 aa-0.16□□□□□ -2.44
GTF3C3-209ENST00000466862 PCLOQ9Y6V0 5065 aa-0.16□□□□□ -2.44
GTF3C3-209ENST00000466862 STAB2Q8WWQ8 2551 aa-0.16□□□□□ -2.44
GTF3C3-209ENST00000466862 CLASP1Q7Z460 1538 aa-0.17□□□□□ -2.44
GTF3C3-209ENST00000466862 CROCC2H7BZ55 1655 aa-0.17□□□□□ -2.44
GTF3C3-209ENST00000466862 SMIM31A0A1B0GVY4 71 aa-0.17□□□□□ -2.44
GTF3C3-209ENST00000466862 M0R1W7 72 aa-0.17□□□□□ -2.44
GTF3C3-209ENST00000466862 CEP290O15078 2479 aa-0.17□□□□□ -2.44
GTF3C3-209ENST00000466862 GCN1Q92616 2671 aaKnown RBP-0.17□□□□□ -2.44
GTF3C3-209ENST00000466862 TRIOO75962 3097 aa-0.17□□□□□ -2.44
GTF3C3-209ENST00000466862 KALRNO60229 2985 aa-0.18□□□□□ -2.44
GTF3C3-209ENST00000466862 NBPF19A0A087WUL8 3843 aa-0.18□□□□□ -2.44
GTF3C3-209ENST00000466862 CDC42BPAQ5VT25 1732 aa-0.18□□□□□ -2.44
GTF3C3-209ENST00000466862 RANBP2P49792 3224 aaKnown RBP-0.18□□□□□ -2.44
GTF3C3-209ENST00000466862 TIAM1Q13009 1591 aa-0.18□□□□□ -2.44
GTF3C3-209ENST00000466862 SPG11Q96JI7 2443 aa-0.18□□□□□ -2.44
GTF3C3-209ENST00000466862 K7EMI3 77 aa-0.18□□□□□ -2.44
GTF3C3-209ENST00000466862 MT1AP04731 61 aa-0.18□□□□□ -2.44
GTF3C3-209ENST00000466862 S100ZQ8WXG8 99 aa-0.18□□□□□ -2.44
GTF3C3-209ENST00000466862 SPRR2FQ96RM1 72 aa-0.18□□□□□ -2.44
GTF3C3-209ENST00000466862 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.18□□□□□ -2.44
GTF3C3-209ENST00000466862 PKD1L2Q7Z442 2459 aa-0.18□□□□□ -2.44
GTF3C3-209ENST00000466862 HERC1Q15751 4861 aa-0.18□□□□□ -2.44
GTF3C3-209ENST00000466862 TACC2O95359 2948 aa-0.18□□□□□ -2.44
GTF3C3-209ENST00000466862 KRTAP19-8Q3LI54 63 aa-0.19□□□□□ -2.44
GTF3C3-209ENST00000466862 ABCA10Q8WWZ4 1543 aa-0.19□□□□□ -2.44
GTF3C3-209ENST00000466862 UGGT1Q9NYU2 1555 aa-0.19□□□□□ -2.44
GTF3C3-209ENST00000466862 EEA1Q15075 1411 aa-0.2□□□□□ -2.44
GTF3C3-209ENST00000466862 MXRA5Q9NR99 2828 aa-0.2□□□□□ -2.44
GTF3C3-209ENST00000466862 H3BUA1 57 aa-0.2□□□□□ -2.44
GTF3C3-209ENST00000466862 DEFB110Q30KQ9 67 aa-0.2□□□□□ -2.44
GTF3C3-209ENST00000466862 NMES1Q9C002 83 aa-0.2□□□□□ -2.44
GTF3C3-209ENST00000466862 MTORP42345 2549 aa-0.21□□□□□ -2.44
GTF3C3-209ENST00000466862 FASNP49327 2511 aaKnown RBP-0.21□□□□□ -2.44
GTF3C3-209ENST00000466862 EPG5Q9HCE0 2579 aa-0.21□□□□□ -2.44
GTF3C3-209ENST00000466862 MUC17Q685J3 4493 aa-0.21□□□□□ -2.44
GTF3C3-209ENST00000466862 CPS1P31327 1500 aa-0.21□□□□□ -2.44
GTF3C3-209ENST00000466862 ANKRD11Q6UB99 2663 aaPredicted RBP-0.21□□□□□ -2.44
GTF3C3-209ENST00000466862 IGLV5-48A0A075B6I7 105 aa-0.21□□□□□ -2.44
GTF3C3-209ENST00000466862 HIVEP1P15822 2718 aa-0.21□□□□□ -2.44
GTF3C3-209ENST00000466862 ALS2Q96Q42 1657 aa-0.21□□□□□ -2.44
GTF3C3-209ENST00000466862 PRXQ9BXM0 1461 aa-0.22□□□□□ -2.44
GTF3C3-209ENST00000466862 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.22□□□□□ -2.44
GTF3C3-209ENST00000466862 ERICH3Q5RHP9 1530 aa-0.22□□□□□ -2.44
GTF3C3-209ENST00000466862 DNAH1Q9P2D7 4330 aa-0.22□□□□□ -2.44
GTF3C3-209ENST00000466862 TEP1Q99973 2627 aaKnown RBP-0.22□□□□□ -2.44
GTF3C3-209ENST00000466862 IGIPA6NJ69 53 aa-0.22□□□□□ -2.44
GTF3C3-209ENST00000466862 SERF2P84101 59 aa-0.22□□□□□ -2.44
GTF3C3-209ENST00000466862 SMIM5Q71RC9 77 aa-0.22□□□□□ -2.44
GTF3C3-209ENST00000466862 SPENQ96T58 3664 aaKnown RBP-0.23□□□□□ -2.45
GTF3C3-209ENST00000466862 PLECQ15149 4684 aaKnown RBP-0.23□□□□□ -2.45
GTF3C3-209ENST00000466862 LAMA1P25391 3075 aa-0.24□□□□□ -2.45
GTF3C3-209ENST00000466862 DNAH8Q96JB1 4490 aa-0.24□□□□□ -2.45
GTF3C3-209ENST00000466862 UTP20O75691 2785 aaKnown RBP-0.24□□□□□ -2.45
GTF3C3-209ENST00000466862 UBR4Q5T4S7 5183 aa-0.24□□□□□ -2.45
GTF3C3-209ENST00000466862 LINC00308Q8TCZ7 52 aa-0.24□□□□□ -2.45
GTF3C3-209ENST00000466862 NOP10Q9NPE3 64 aaKnown RBP-0.24□□□□□ -2.45
GTF3C3-209ENST00000466862 TMEM167BQ9NRX6 74 aa-0.24□□□□□ -2.45
GTF3C3-209ENST00000466862 USH2AO75445 5202 aa-0.24□□□□□ -2.45
GTF3C3-209ENST00000466862 A0A1B0GUL6 1792 aa-0.24□□□□□ -2.45
GTF3C3-209ENST00000466862 NEBP20929 6669 aa-0.25□□□□□ -2.45
GTF3C3-209ENST00000466862 LRRK2Q5S007 2527 aa-0.25□□□□□ -2.45
GTF3C3-209ENST00000466862 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.25□□□□□ -2.45
GTF3C3-209ENST00000466862 SPTBN5Q9NRC6 3674 aaKnown RBP-0.25□□□□□ -2.45
GTF3C3-209ENST00000466862 MMP24-AS1A0A0U1RRL7 71 aa-0.25□□□□□ -2.45
GTF3C3-209ENST00000466862 EFCAB6Q5THR3 1501 aa-0.25□□□□□ -2.45
GTF3C3-209ENST00000466862 MAST1Q9Y2H9 1570 aa-0.25□□□□□ -2.45
GTF3C3-209ENST00000466862 NBEAQ8NFP9 2946 aa-0.25□□□□□ -2.45
GTF3C3-209ENST00000466862 RELNP78509 3460 aa-0.26□□□□□ -2.45
GTF3C3-209ENST00000466862 WDR87Q6ZQQ6 2873 aa-0.26□□□□□ -2.45
GTF3C3-209ENST00000466862 KAAG1Q9UBP8 84 aa-0.26□□□□□ -2.45
GTF3C3-209ENST00000466862 ACACBO00763 2458 aa-0.26□□□□□ -2.45
GTF3C3-209ENST00000466862 FAM186AA6NE01 2351 aa-0.26□□□□□ -2.45
GTF3C3-209ENST00000466862 HERC2O95714 4834 aa-0.26□□□□□ -2.45
GTF3C3-209ENST00000466862 MROH2AA6NES4 1674 aa-0.27□□□□□ -2.45
GTF3C3-209ENST00000466862 MYO18BQ8IUG5 2567 aa-0.27□□□□□ -2.45
GTF3C3-209ENST00000466862 A0A0C4DFX4 3053 aa-0.27□□□□□ -2.45
GTF3C3-209ENST00000466862 TNP1P09430 55 aa-0.27□□□□□ -2.45
GTF3C3-209ENST00000466862 ABRACLQ9P1F3 81 aa-0.27□□□□□ -2.45
GTF3C3-209ENST00000466862 NBEAL2Q6ZNJ1 2754 aa-0.27□□□□□ -2.45
GTF3C3-209ENST00000466862 ACACAQ13085 2346 aa-0.27□□□□□ -2.45
GTF3C3-209ENST00000466862 AGLP35573 1532 aa-0.28□□□□□ -2.45
GTF3C3-209ENST00000466862 DYNC1H1Q14204 4646 aaKnown RBP-0.28□□□□□ -2.45
GTF3C3-209ENST00000466862 MGAM2Q2M2H8 2515 aa-0.28□□□□□ -2.45
GTF3C3-209ENST00000466862 SYCP2Q9BX26 1530 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms