RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 COA5Q86WW8 74 aa9.48□□□□□ -0.89
SNED1-208ENST00000466618 LRP1BQ9NZR2 4599 aa9.47□□□□□ -0.89
SNED1-208ENST00000466618 CASC2Q6XLA1 102 aa9.47□□□□□ -0.89
SNED1-208ENST00000466618 KRTAP10-1P60331 282 aa9.46□□□□□ -0.89
SNED1-208ENST00000466618 CDC42SE1Q9NRR8 79 aa9.46□□□□□ -0.9
SNED1-208ENST00000466618 DNAH8Q96JB1 4490 aa9.45□□□□□ -0.9
SNED1-208ENST00000466618 IGLV8-61A0A075B6I0 122 aa9.44□□□□□ -0.9
SNED1-208ENST00000466618 A0A096LNI7 61 aa9.44□□□□□ -0.9
SNED1-208ENST00000466618 PANO1I0J062 215 aa9.43□□□□□ -0.9
SNED1-208ENST00000466618 IGLV7-46A0A075B6I9 117 aa9.43□□□□□ -0.9
SNED1-208ENST00000466618 Q6ZSA8 131 aa9.43□□□□□ -0.9
SNED1-208ENST00000466618 REG3GQ6UW15 175 aa9.42□□□□□ -0.9
SNED1-208ENST00000466618 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.42□□□□□ -0.9
SNED1-208ENST00000466618 CHTF8P0CG12 524 aa9.41□□□□□ -0.9
SNED1-208ENST00000466618 PLAC8Q9NZF1 115 aa9.41□□□□□ -0.9
SNED1-208ENST00000466618 SPACA4Q8TDM5 124 aa9.4□□□□□ -0.9
SNED1-208ENST00000466618 IGKV2-24A0A0C4DH68 120 aa9.4□□□□□ -0.91
SNED1-208ENST00000466618 MOBPQ13875 183 aa9.39□□□□□ -0.91
SNED1-208ENST00000466618 A8MWP4 228 aa9.39□□□□□ -0.91
SNED1-208ENST00000466618 C7orf65Q6ZTY9 151 aa9.39□□□□□ -0.91
SNED1-208ENST00000466618 LINC01558Q9Y6Z2 57 aa9.38□□□□□ -0.91
SNED1-208ENST00000466618 LINC00472Q9H8W2 130 aa9.37□□□□□ -0.91
SNED1-208ENST00000466618 APOBP04114 4563 aaKnown RBP9.36□□□□□ -0.91
SNED1-208ENST00000466618 PRLHP81277 87 aa9.36□□□□□ -0.91
SNED1-208ENST00000466618 MMP24-AS1A0A0U1RRL7 71 aa9.34□□□□□ -0.91
SNED1-208ENST00000466618 SPAG11AQ6PDA7 123 aa9.33□□□□□ -0.92
SNED1-208ENST00000466618 CIRBP-AS1Q8TBR5 109 aa9.33□□□□□ -0.92
SNED1-208ENST00000466618 PCOTHQ58A44 107 aa9.32□□□□□ -0.92
SNED1-208ENST00000466618 SPINK7P58062 85 aa9.31□□□□□ -0.92
SNED1-208ENST00000466618 RYR1P21817 5038 aa9.28□□□□□ -0.92
SNED1-208ENST00000466618 BIRC6Q9NR09 4857 aa9.28□□□□□ -0.92
SNED1-208ENST00000466618 CDK2AP2O75956 126 aa9.27□□□□□ -0.93
SNED1-208ENST00000466618 H0Y9J4 135 aa9.26□□□□□ -0.93
SNED1-208ENST00000466618 KIAA1109Q2LD37 5005 aa9.26□□□□□ -0.93
SNED1-208ENST00000466618 HRES1P13985 223 aa9.24□□□□□ -0.93
SNED1-208ENST00000466618 ASB16-AS1Q495Z4 193 aa9.24□□□□□ -0.93
SNED1-208ENST00000466618 SPRR1BP22528 89 aa9.24□□□□□ -0.93
SNED1-208ENST00000466618 HSPG2P98160 4391 aa9.23□□□□□ -0.93
SNED1-208ENST00000466618 KRTAP11-1Q8IUC1 163 aa9.22□□□□□ -0.93
SNED1-208ENST00000466618 TP53AIP1Q9HCN2 124 aa9.2□□□□□ -0.94
SNED1-208ENST00000466618 C8orf87E5RJ46 101 aa9.2□□□□□ -0.94
SNED1-208ENST00000466618 FAT1Q14517 4588 aa9.18□□□□□ -0.94
SNED1-208ENST00000466618 Q96NJ1 140 aa9.18□□□□□ -0.94
SNED1-208ENST00000466618 LINC00313P59037 77 aa9.16□□□□□ -0.94
SNED1-208ENST00000466618 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
SNED1-208ENST00000466618 VPS13BQ7Z7G8 4022 aa9.16□□□□□ -0.94
SNED1-208ENST00000466618 PSORS1C2Q9UIG4 136 aa9.14□□□□□ -0.95
SNED1-208ENST00000466618 PRAC1Q96KF2 57 aa9.14□□□□□ -0.95
SNED1-208ENST00000466618 KRTAP17-1Q9BYP8 105 aa9.14□□□□□ -0.95
SNED1-208ENST00000466618 C8orf17Q9NRJ1 99 aa9.14□□□□□ -0.95
SNED1-208ENST00000466618 SRRM2Q9UQ35 2752 aaKnown RBP9.11□□□□□ -0.95
SNED1-208ENST00000466618 KRTAP10-4P60372 401 aaPredicted RBP9.11□□□□□ -0.95
SNED1-208ENST00000466618 HERC2O95714 4834 aa9.1□□□□□ -0.95
SNED1-208ENST00000466618 PRR26Q8N8Z3 221 aa9.1□□□□□ -0.95
SNED1-208ENST00000466618 C4orf48Q5BLP8 95 aa9.09□□□□□ -0.95
SNED1-208ENST00000466618 ADM2Q7Z4H4 148 aa9.09□□□□□ -0.95
SNED1-208ENST00000466618 Q8N1X5 172 aa9.07□□□□□ -0.96
SNED1-208ENST00000466618 FAM229AH3BQW9 127 aa9.06□□□□□ -0.96
SNED1-208ENST00000466618 KRTAP13-1Q8IUC0 172 aa9.06□□□□□ -0.96
SNED1-208ENST00000466618 PLA2G1BP04054 148 aaKnown RBP9.05□□□□□ -0.96
SNED1-208ENST00000466618 IGHV6-1A0A0B4J1U7 121 aa9.05□□□□□ -0.96
SNED1-208ENST00000466618 A0A1B0GVX0 72 aa9.05□□□□□ -0.96
SNED1-208ENST00000466618 IGLV7-43P04211 117 aa9.05□□□□□ -0.96
SNED1-208ENST00000466618 Q5VSD8 79 aa9.05□□□□□ -0.96
SNED1-208ENST00000466618 MRPL34Q9BQ48 92 aaKnown RBP9.05□□□□□ -0.96
SNED1-208ENST00000466618 A0A087X002 238 aa9.01□□□□□ -0.97
SNED1-208ENST00000466618 ZNF861PO60384 105 aa9.01□□□□□ -0.97
SNED1-208ENST00000466618 NOTCH2NLQ7Z3S9 236 aa9.01□□□□□ -0.97
SNED1-208ENST00000466618 LINC01554Q52M75 96 aa8.99□□□□□ -0.97
SNED1-208ENST00000466618 IGLV9-49A0A0B4J1Y8 123 aa8.99□□□□□ -0.97
SNED1-208ENST00000466618 KRTAP13-3Q3SY46 172 aa8.98□□□□□ -0.97
SNED1-208ENST00000466618 Q5W150 140 aa8.97□□□□□ -0.97
SNED1-208ENST00000466618 KRTAP4-5Q9BYR2 181 aa8.96□□□□□ -0.98
SNED1-208ENST00000466618 SPINK6Q6UWN8 80 aa8.95□□□□□ -0.98
SNED1-208ENST00000466618 PKHD1L1Q86WI1 4243 aa8.95□□□□□ -0.98
SNED1-208ENST00000466618 ACYP2P14621 99 aa8.94□□□□□ -0.98
SNED1-208ENST00000466618 SPATA8Q6RVD6 105 aa8.93□□□□□ -0.98
SNED1-208ENST00000466618 ABCA13Q86UQ4 5058 aa8.92□□□□□ -0.98
SNED1-208ENST00000466618 LINC00483Q53H64 154 aa8.9□□□□□ -0.98
SNED1-208ENST00000466618 DMAC1Q96GE9 116 aa8.9□□□□□ -0.98
SNED1-208ENST00000466618 A0A1B0GU69 56 aa8.88□□□□□ -0.99
SNED1-208ENST00000466618 H3BS24 57 aa8.87□□□□□ -0.99
SNED1-208ENST00000466618 KRTAP1-4P0C5Y4 121 aa8.86□□□□□ -0.99
SNED1-208ENST00000466618 MYCBP2O75592 4640 aa8.85□□□□□ -0.99
SNED1-208ENST00000466618 ZNF706Q9Y5V0 76 aaPredicted RBP8.83□□□□□ -1
SNED1-208ENST00000466618 MIR22HGQ0VDD5 57 aa8.83□□□□□ -1
SNED1-208ENST00000466618 LRP1Q07954 4544 aaKnown RBP8.82□□□□□ -1
SNED1-208ENST00000466618 FAT3Q8TDW7 4589 aa8.81□□□□□ -1
SNED1-208ENST00000466618 ANAPC11Q9NYG5 84 aa8.81□□□□□ -1
SNED1-208ENST00000466618 UQCR11O14957 56 aa8.79□□□□□ -1
SNED1-208ENST00000466618 CSAG1Q6PB30 78 aa8.78□□□□□ -1
SNED1-208ENST00000466618 PCLOQ9Y6V0 5065 aa8.78□□□□□ -1
SNED1-208ENST00000466618 FLG2Q5D862 2391 aaPredicted RBP8.75□□□□□ -1.01
SNED1-208ENST00000466618 KRTAP13-2Q52LG2 175 aa8.74□□□□□ -1.01
SNED1-208ENST00000466618 TNXBP22105 4242 aa8.71□□□□□ -1.01
SNED1-208ENST00000466618 KRTAP10-8P60410 259 aa8.71□□□□□ -1.01
SNED1-208ENST00000466618 RETNLBQ9BQ08 111 aa8.71□□□□□ -1.02
SNED1-208ENST00000466618 IGKV2-30P06310 120 aa8.7□□□□□ -1.02
SNED1-208ENST00000466618 MT1HL1P0DM35 61 aa8.69□□□□□ -1.02
SNED1-208ENST00000466618 TYMSOSQ8TAI1 123 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms